prot_Ecto-sp13_S_contig12816.2328.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12816.2328.1
Unique Nameprot_Ecto-sp13_S_contig12816.2328.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length199
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12816.2328.1 vs. uniprot
Match: D8LFW2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFW2_ECTSI)

HSP 1 Score: 298 bits (763), Expect = 1.150e-100
Identity = 158/204 (77.45%), Postives = 165/204 (80.88%), Query Frame = 0 
Query:    1 MGGGEKSEKLKGSIGSSTSRDGSNKPYSNIIGRNNSRNDNDNGTVSDKSDKMSGDKDTKKDGKGTRNKGFEDDHNVPAGSWVQHLHKQGYMFWRNNHTGECTRDLFFGPWGFYPTTQYRELVPASFAPILVDTNEEKASATVDKGKGKGSKKDXXXXXXXXPATWFP------QPWEEIYHPVTGKKHWRHRATGEERQKDPLW 198
            MGGGEKS K KG+IG S+S DGSNKP SNI G++NSRNDNDNG             +TKK+GKG RNKGFEDD NVPAGSWVQHLHKQGYMFWRNNHTGECTRDLFFGPWG YPT QYRELVPASFAP  VD NEE ASATVDKGKGKGSKKDXXXX    PA WF       QPWEEIYHPVTG+KHWRHRATGEERQKDPLW
Sbjct:    1 MGGGEKSVKRKGTIGRSSSGDGSNKPSSNISGQHNSRNDNDNGXXXXXXXXXXXXXNTKKNGKGCRNKGFEDDDNVPAGSWVQHLHKQGYMFWRNNHTGECTRDLFFGPWGSYPTVQYRELVPASFAPTFVDKNEENASATVDKGKGKGSKKDXXXXQGPPPAIWFVSLLPELQPWEEIYHPVTGEKHWRHRATGEERQKDPLW 204
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12816.2328.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LFW2_ECTSI1.150e-10077.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12816contigEcto-sp13_S_contig12816:1654..3634 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12816.2328.1mRNA_Ecto-sp13_S_contig12816.2328.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12816 1654..3634 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12816.2328.1 ID=prot_Ecto-sp13_S_contig12816.2328.1|Name=mRNA_Ecto-sp13_S_contig12816.2328.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=199bp
MGGGEKSEKLKGSIGSSTSRDGSNKPYSNIIGRNNSRNDNDNGTVSDKSD
KMSGDKDTKKDGKGTRNKGFEDDHNVPAGSWVQHLHKQGYMFWRNNHTGE
CTRDLFFGPWGFYPTTQYRELVPASFAPILVDTNEEKASATVDKGKGKGS
KKDDEEQQAPPPATWFPQPWEEIYHPVTGKKHWRHRATGEERQKDPLW*
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