prot_Ecto-sp13_S_contig12815.2327.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12815.2327.1
Unique Nameprot_Ecto-sp13_S_contig12815.2327.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length251
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12815.2327.1 vs. uniprot
Match: A0A6H5K4Q3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4Q3_9PHAE)

HSP 1 Score: 67.4 bits (163), Expect = 8.230e-11
Identity = 40/48 (83.33%), Postives = 41/48 (85.42%), Query Frame = 0 
Query:    1 TPASDRRGGKRSTSQDRGSRNQRARVADSQENDIDPIEEAVSIVEVPN 48
            TPA DRRGGKRS SQ RGSRNQ ARVADS+ENDIDPIEEAVSI E  N
Sbjct:   55 TPAYDRRGGKRSKSQGRGSRNQTARVADSRENDIDPIEEAVSIAEDTN 102
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12815.2327.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K4Q3_9PHAE8.230e-1183.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12815contigEcto-sp13_S_contig12815:2166..3707 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12815.2327.1mRNA_Ecto-sp13_S_contig12815.2327.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12815 813..3707 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12815.2327.1 ID=prot_Ecto-sp13_S_contig12815.2327.1|Name=mRNA_Ecto-sp13_S_contig12815.2327.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=251bp
TPASDRRGGKRSTSQDRGSRNQRARVADSQENDIDPIEEAVSIVEVPNNQ
RLAANIPQVAHAVGESIVRQGWTPALSCAVACEMLMRAGCPGSLRRIQPQ
SEGPTESSHAKPPPLAASCISFCFWPATSEPRRTGRRWYSVRAPPSSRGA
TSCTSTPGDRRTSRSSPERALERGVHLLCQLLFGTRCQLQQFCISTARAT
VFPTTTTEVICAPVVLRLDVARGHLPVHLPIAVRFLDQTRVTHTSLAFIW
*
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