prot_Ecto-sp13_S_contig12814.2326.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12814.2326.1
Unique Nameprot_Ecto-sp13_S_contig12814.2326.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length105
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12814.2326.1 vs. uniprot
Match: A0A6H5KR12_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR12_9PHAE)

HSP 1 Score: 194 bits (494), Expect = 1.650e-55
Identity = 99/105 (94.29%), Postives = 100/105 (95.24%), Query Frame = 0 
Query:    1 MYNFVLKLNLATTEGKERFMKKWAIGRIANGESINPREGWKFLKSLGIDAPKPRSPVAATDFARPGSPSEKESTTAQSGTDKQTTTGMTTPAAASRGRGRTGNTP 105
            MYNFVLKLNLATTEGKERFMKKWAIGRIANGESINPREGWKFLKSLGID PKPRSP AA DFA PGSPSEK+STTAQSGT KQTTTGMTTPAAASRGRGRTGNTP
Sbjct:  343 MYNFVLKLNLATTEGKERFMKKWAIGRIANGESINPREGWKFLKSLGIDVPKPRSPNAAADFASPGSPSEKDSTTAQSGTTKQTTTGMTTPAAASRGRGRTGNTP 447
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BLAST of mRNA_Ecto-sp13_S_contig12814.2326.1 vs. uniprot
Match: D7G3I4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3I4_ECTSI)

HSP 1 Score: 190 bits (483), Expect = 5.010e-54
Identity = 97/105 (92.38%), Postives = 99/105 (94.29%), Query Frame = 0 
Query:    1 MYNFVLKLNLATTEGKERFMKKWAIGRIANGESINPREGWKFLKSLGIDAPKPRSPVAATDFARPGSPSEKESTTAQSGTDKQTTTGMTTPAAASRGRGRTGNTP 105
            MYNFVLKLNLATTEGKERFMKKWAIGRIANGESINPREGWKFLKSLGID PKPRSP AATDFARPGSPSEK+ TTAQS  +KQTTTGM TPAAASRGRGRTGNTP
Sbjct:  269 MYNFVLKLNLATTEGKERFMKKWAIGRIANGESINPREGWKFLKSLGIDVPKPRSPNAATDFARPGSPSEKDITTAQSAPNKQTTTGMITPAAASRGRGRTGNTP 373
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12814.2326.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KR12_9PHAE1.650e-5594.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3I4_ECTSI5.010e-5492.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12814contigEcto-sp13_S_contig12814:343..957 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12814.2326.1mRNA_Ecto-sp13_S_contig12814.2326.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12814 343..4747 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12814.2326.1 ID=prot_Ecto-sp13_S_contig12814.2326.1|Name=mRNA_Ecto-sp13_S_contig12814.2326.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=105bp
MYNFVLKLNLATTEGKERFMKKWAIGRIANGESINPREGWKFLKSLGIDA
PKPRSPVAATDFARPGSPSEKESTTAQSGTDKQTTTGMTTPAAASRGRGR
TGNTP
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