mRNA_Ecto-sp13_S_contig12813.2325.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig12813.2325.1 vs. uniprot
Match: D7FMC3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMC3_ECTSI) HSP 1 Score: 288 bits (736), Expect = 1.010e-87 Identity = 158/172 (91.86%), Postives = 165/172 (95.93%), Query Frame = 1
Query: 1 QRAKGLVAQEKGDTVRGGWDPEISARRQVRLPELSAAQARREEYFYPTAAEVQARADKLRERQRRLEVKQVDLAKARDELLPEARREYEYVLEDSRHPFNRATCKPEDLRRAREEAKSEVTRLSKEAKRLEGNVATAARTLRESPSTVDSTLAEAAATRRLLSARKLLRLQQ 516
QRAKGL+AQE+GDTV GGWDPEISARRQVRLPELSA QARREEYFYPTAAEVQAR DKLRERQRRLEVK+VDLAK RD+LLPEARREYEYVLEDSRHPFNRATCKPEDLRRAREEAKSEVTRLSKEAKRLEG++ +AAR LRESPSTVD TLAEAAATRRLLSARKLLRLQQ
Sbjct: 653 QRAKGLIAQERGDTVSGGWDPEISARRQVRLPELSAGQARREEYFYPTAAEVQARVDKLRERQRRLEVKRVDLAKVRDDLLPEARREYEYVLEDSRHPFNRATCKPEDLRRAREEAKSEVTRLSKEAKRLEGHLESAARALRESPSTVDGTLAEAAATRRLLSARKLLRLQQ 824
BLAST of mRNA_Ecto-sp13_S_contig12813.2325.1 vs. uniprot
Match: A0A6H5L329_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L329_9PHAE) HSP 1 Score: 259 bits (661), Expect = 2.240e-82 Identity = 144/157 (91.72%), Postives = 148/157 (94.27%), Query Frame = 1
Query: 40 TVRGGWDPEISARRQVRLPELSAAQARREEYFYPTAAEVQARADKLRERQRRLEVKQVDLAKARDELLPEARREYEYVLEDSRHPFNRATCKPEDLRRAREEAKSEVTRLSKEAKRLEGNVATAARTLRESPSTVDSTLAEAAATRRLLSARKLLRL 510
TV GGWDPEISARRQVRLPELSA QARR+EYFYPTAAEVQAR DKLRERQRRLEVKQVDL K RDELLP+AR+EYEYVLEDSRHPFNRATCKPEDLRRAREEAKSEVTRLSKEAKR EG+VATAAR LRESPSTVD TLAEAAA RRLLSARKLLRL
Sbjct: 8 TVNGGWDPEISARRQVRLPELSAGQARRKEYFYPTAAEVQARVDKLRERQRRLEVKQVDLTKVRDELLPKARKEYEYVLEDSRHPFNRATCKPEDLRRAREEAKSEVTRLSKEAKRREGDVATAARALRESPSTVDGTLAEAAAPRRLLSARKLLRL 164
BLAST of mRNA_Ecto-sp13_S_contig12813.2325.1 vs. uniprot
Match: D7FTS2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTS2_ECTSI) HSP 1 Score: 235 bits (600), Expect = 6.500e-69 Identity = 132/165 (80.00%), Postives = 144/165 (87.27%), Query Frame = 1
Query: 1 QRAKGLVAQEKGDTVRGGWDPEISARRQVRLPELSAAQARREEYFYPTAAEVQARADKLRERQRRLEVKQVDLAKARDELLPEARREYEYVLEDSRHPFNRATCKPEDLRRAREEAKSEVTRLSKEAKRLEGNVATAARTLRESPSTVDSTLAEAAATRRLLSAR 495
QRAKGLVAQE+GDTV GWDPEISARRQVRLPELSA Q RREEYFYPTA EVQAR DKLRERQ RLE K+ +LA+ RD+LLPEAR+E+ VLED+RHPFN+ T KPEDLRRAREEAKSEV RLSKE KRLEG+V +AAR LR+SPSTVD TL EAAATRRLLS R
Sbjct: 595 QRAKGLVAQERGDTVSRGWDPEISARRQVRLPELSAGQTRREEYFYPTAVEVQARVDKLRERQCRLEAKRAELAEVRDKLLPEARQEHADVLEDTRHPFNKKTWKPEDLRRAREEAKSEVNRLSKEEKRLEGHVVSAARALRDSPSTVDGTLEEAAATRRLLSDR 759
BLAST of mRNA_Ecto-sp13_S_contig12813.2325.1 vs. uniprot
Match: A0A6H5KBD8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBD8_9PHAE) HSP 1 Score: 211 bits (537), Expect = 3.120e-62 Identity = 118/165 (71.52%), Postives = 137/165 (83.03%), Query Frame = 1
Query: 1 QRAKGLVAQEKGDTVRGGWDPEISARRQVRLPELSAAQARREEYFYPTAAEVQARADKLRERQRRLEVKQVDLAKARDELLPEARREYEYVLEDSRHPFNRATCKPEDLRRAREEAKSEVTRLSKEAKRLEGNVATAARTLRESPSTVDSTLAEAAATRRLLSAR 495
QRA+ LVAQE+GDTVRGGWDPEI ARR+VRLPEL+ Q RR+EYFYPTAAEV+ + KL+ERQRRLE KQ LA +DELLPEA+ EY VLED+RHP N+ +PEDLRRAR+EAKSEV RL+KEA+RLEG+V++A R LRESP TVDS AEA ATRRLLS R
Sbjct: 25 QRAQSLVAQERGDTVRGGWDPEIGARREVRLPELTPEQTRRKEYFYPTAAEVEDKVQKLQERQRRLEDKQAKLAHVKDELLPEAKEEYANVLEDTRHPANKEAFRPEDLRRARDEAKSEVDRLAKEARRLEGDVSSAKRALRESPYTVDSLRAEADATRRLLSER 189
BLAST of mRNA_Ecto-sp13_S_contig12813.2325.1 vs. uniprot
Match: D7FIN4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIN4_ECTSI) HSP 1 Score: 189 bits (481), Expect = 1.530e-52 Identity = 108/165 (65.45%), Postives = 128/165 (77.58%), Query Frame = 1
Query: 1 QRAKGLVAQEKGDTVRGGWDPEISARRQVRLPELSAAQARREEYFYPTAAEVQARADKLRERQRRLEVKQVDLAKARDELLPEARREYEYVLEDSRHPFNRATCKPEDLRRAREEAKSEVTRLSKEAKRLEGNVATAARTLRESPSTVDSTLAEAAATRRLLSAR 495
QRA+ LVAQE+GDTV GGWDPEI ARR+V+LP+L+ Q RR+EYFYPTAAEV+ R KL+E LA +DELLPEA+ EY VLED+RHP N+ +PEDLRRAR+EAKSEV RL+KEA+RLEG+V++A R LRESP TVDS AEA ATRRLLS R
Sbjct: 1132 QRAQSLVAQERGDTVSGGWDPEIGARREVQLPQLTPEQTRRKEYFYPTAAEVEDRVQKLQEXXXXXXXXXXXLAHVKDELLPEAKEEYANVLEDTRHPANKEAFRPEDLRRARDEAKSEVDRLAKEARRLEGDVSSAKRALRESPYTVDSLRAEADATRRLLSER 1296
BLAST of mRNA_Ecto-sp13_S_contig12813.2325.1 vs. uniprot
Match: D7FT01_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT01_ECTSI) HSP 1 Score: 186 bits (473), Expect = 1.710e-51 Identity = 98/121 (80.99%), Postives = 106/121 (87.60%), Query Frame = 1
Query: 1 QRAKGLVAQEKGDTVRGGWDPEISARRQVRLPELSAAQARREEYFYPTAAEVQARADKLRERQRRLEVKQVDLAKARDELLPEARREYEYVLEDSRHPFNRATCKPEDLRRAREEAKSEVT 363
QRAKGLVAQE+GDTV GGWDP+ISARRQVRLPELSA QARREEYFYPTA +VQ DKLRERQR+L+ KQ DLAK RD+LLPEAR EY+YVLED+RHP NR T PEDLR AREEAKSEVT
Sbjct: 579 QRAKGLVAQERGDTVSGGWDPKISARRQVRLPELSAGQARREEYFYPTAEKVQGTVDKLRERQRKLKAKQADLAKVRDKLLPEAREEYDYVLEDTRHPVNRVTRTPEDLRSAREEAKSEVT 699
BLAST of mRNA_Ecto-sp13_S_contig12813.2325.1 vs. uniprot
Match: A0A7S2BNQ5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BNQ5_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 5.800e-12 Identity = 47/114 (41.23%), Postives = 65/114 (57.02%), Query Frame = 1
Query: 16 LVAQEKGDTVRGGWDPEISARRQVRLPELSAAQARREEYFYPTAAEVQARADKLRERQRRLEVKQVDLAKARDELLPEARREYEYVLEDSRHPFNRATCKPEDLRRAREEAKSE 357
LVAQ++GDTVR GWDPE RR ++LP L A Q R+ Y Y T E R DK ER+ RL+ Q L +A + +A+RE++ VL D+R R + + L R A+ +
Sbjct: 14 LVAQQRGDTVRAGWDPEKKTRRTMQLPPLRAEQERKSLYSYLTEEEANLRLDKYAERETRLKDLQDRLTEAEASEV-DAKREFDDVLADARREDVRQHYEKKQLAEIRANARQQ 126
BLAST of mRNA_Ecto-sp13_S_contig12813.2325.1 vs. uniprot
Match: A0A5D6XHR3_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XHR3_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 1.120e-10 Identity = 63/170 (37.06%), Postives = 85/170 (50.00%), Query Frame = 1
Query: 16 LVAQEKGDTVRGGWDPEISARRQVRLPELSAAQARREEYFYPTAAEVQARADKLRERQRRLEVKQVDLAKARDELLPEARREYEYVLEDSR-----HPFNRATCKPEDLRRAREEAKSEVTRLSKEAKRLEGNVATAARTLRESPSTVDSTLAEAAATRRLLSARKLLRL 510
LVA+E+G++V+ GWDP AR V LP L+ Q Y YP+ AE+ AR K ++ RLE+K+ L L+P A+ EY + ED+R F RAT L R R++AK + L+K L VA A R T L EAA R L A + R+
Sbjct: 794 LVARERGESVKAGWDPVRRARGDVPLPPLADKQLLNAVYRYPSDAEIAARVAKFELQRERLELKREKLRGLEAALIPAAKAEYLAIAEDARSDALQRSFGRAT-----LVRLRDDAKQALQALAKTRDALASEVAHAERQWGALCPTFAQFLDEAAKVRALDPATRAARI 958
BLAST of mRNA_Ecto-sp13_S_contig12813.2325.1 vs. uniprot
Match: A0A2D4BND2_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BND2_PYTIN) HSP 1 Score: 62.8 bits (151), Expect = 2.700e-8 Identity = 37/91 (40.66%), Postives = 51/91 (56.04%), Query Frame = 1
Query: 16 LVAQEKGDTVRGGWDPEISARRQVRLPELSAAQARREEYFYPTAAEVQARADKLRERQRRLEVKQVDLAKARDELLPEARREYEYVLEDSR 288
LV Q++G+T++ GWDP R V L L+ Q Y YPT E+ AR +K +QRRLE K+ LA + +P A+ EY ED+R
Sbjct: 756 LVQQQRGETIKAGWDPARGTRADVPLRPLTDKQQLNAVYRYPTDDEINARIEKYETQQRRLEQKRDKLAALESQSIPTAKSEYLATAEDAR 846 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12813.2325.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig12813.2325.1 >prot_Ecto-sp13_S_contig12813.2325.1 ID=prot_Ecto-sp13_S_contig12813.2325.1|Name=mRNA_Ecto-sp13_S_contig12813.2325.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=175bp QRAKGLVAQEKGDTVRGGWDPEISARRQVRLPELSAAQARREEYFYPTAAback to top mRNA from alignment at Ecto-sp13_S_contig12813:227..2347- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig12813.2325.1 ID=mRNA_Ecto-sp13_S_contig12813.2325.1|Name=mRNA_Ecto-sp13_S_contig12813.2325.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2121bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12813:227..2347- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12813:227..2347- >mRNA_Ecto-sp13_S_contig12813.2325.1 ID=mRNA_Ecto-sp13_S_contig12813.2325.1|Name=mRNA_Ecto-sp13_S_contig12813.2325.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=525bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12813:227..2347- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |