prot_Ecto-sp13_S_contig1281.2323.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig1281.2323.1
Unique Name	prot_Ecto-sp13_S_contig1281.2323.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	181

Homology

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BLAST of mRNA_Ecto-sp13_S_contig1281.2323.1 vs. uniprot
Match: D7G8L4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8L4_ECTSI)

HSP 1 Score: 360 bits (925), Expect = 6.990e-126
Identity = 174/180 (96.67%), Postives = 176/180 (97.78%), Query Frame = 0

Query:    1 VQATQLYFPEAVESVEFVRGEGGALELVVSARAQPHLTYVNIETLQQRRVSLNEKEWDTHVSFTVMSMAASGDGKYLLAATDKSRNILWRAGGNARVRTLMGHTTDDYFQPRVQWDPSGLFSYCNSSGDHDVHVHCLASGRVVEQLKGHRAVIRDIHHDPFRSVLVTASYDKTVKVWGER 180
            + ATQLYFPEAVESVEFV+GEGGALELVVSARAQPHLTYVNIETLQQRRVSLNEKEWDTHVSFTVMSMAASGDGKYLLAATDKSRNILWRAG NARVRTLMGHTTDDYFQPRVQWDPSGLFSYCNSSGDHDVHVHCLASGRVVEQLKGHRAVIRDIHHDP R VLVTASYDKTVKVWGER
Sbjct:   11 LMATQLYFPEAVESVEFVKGEGGALELVVSARAQPHLTYVNIETLQQRRVSLNEKEWDTHVSFTVMSMAASGDGKYLLAATDKSRNILWRAGSNARVRTLMGHTTDDYFQPRVQWDPSGLFSYCNSSGDHDVHVHCLASGRVVEQLKGHRAVIRDIHHDPSRRVLVTASYDKTVKVWGER 190

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BLAST of mRNA_Ecto-sp13_S_contig1281.2323.1 vs. uniprot
Match: A0A6H5JKD0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKD0_9PHAE)

HSP 1 Score: 362 bits (928), Expect = 3.960e-125
Identity = 175/179 (97.77%), Postives = 175/179 (97.77%), Query Frame = 0

Query:    2 QATQLYFPEAVESVEFVRGEGGALELVVSARAQPHLTYVNIETLQQRRVSLNEKEWDTHVSFTVMSMAASGDGKYLLAATDKSRNILWRAGGNARVRTLMGHTTDDYFQPRVQWDPSGLFSYCNSSGDHDVHVHCLASGRVVEQLKGHRAVIRDIHHDPFRSVLVTASYDKTVKVWGER 180
            QATQLYFPEAVESVEFVRGEGGALELVVSARAQPHLTYVNIETLQQRRVSLNEKEWDTHVSFTVMSMAASGDGKYLLAATDKSRNILWRAG NARVRTLMGHTTDDYFQPRVQWDPSGLFSYCNSSGDHDVHVHCLASGR VEQLKGHRAVIRDIHHDP R VLVTASYDKTVKVWGER
Sbjct:   91 QATQLYFPEAVESVEFVRGEGGALELVVSARAQPHLTYVNIETLQQRRVSLNEKEWDTHVSFTVMSMAASGDGKYLLAATDKSRNILWRAGSNARVRTLMGHTTDDYFQPRVQWDPSGLFSYCNSSGDHDVHVHCLASGRAVEQLKGHRAVIRDIHHDPSRRVLVTASYDKTVKVWGER 269

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BLAST of mRNA_Ecto-sp13_S_contig1281.2323.1 vs. uniprot
Match: A0A836CE45_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE45_9STRA)

HSP 1 Score: 197 bits (500), Expect = 8.120e-60
Identity = 97/179 (54.19%), Postives = 124/179 (69.27%), Query Frame = 0

Query:    4 TQLYFPEAVESVEFVRG--EGGALELVVSARAQPHLTYVNIET---LQQRRVSLNEKEWDTHVSFTVMSMAASGDGKYLLAATDKSRNILWRAGGNARVRTLMGHTTDDYFQPRVQWDPSGLFSYCNSSGDHDVHVHCLASGRVVEQLKGHRAVIRDIHHDPFRSVLVTASYDKTVKVW 177
            T+LYFPEAVE+VEFV G   G    L+V++R QPHL YV++       Q RVS+N   WD HVSF+V+ +AAS DG+Y+LAATD++R I++RAG NA +RTL+GH  D YFQPR  W PSGL ++CNS     V  +C+A  RVVE+  GH   +RD+   P   VL TASYDK+VKVW
Sbjct:  112 TKLYFPEAVEAVEFVGGGASGDPQRLMVASREQPHLVYVDLVDGAGYAQARVSVNANAWDAHVSFSVLGLAASPDGRYVLAATDRARTIVYRAGHNAHIRTLVGHAADAYFQPRAAWSPSGLTAFCNSQDARGVVAYCVAGARVVERAGGHAGAVRDVCTHPTARVLYTASYDKSVKVW 290

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BLAST of mRNA_Ecto-sp13_S_contig1281.2323.1 vs. uniprot
Match: A0A7S2SGN2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SGN2_9STRA)

HSP 1 Score: 168 bits (426), Expect = 3.660e-48
Identity = 92/179 (51.40%), Postives = 114/179 (63.69%), Query Frame = 0

Query:    7 YFPEAVESVEFV---RGE--GGALE-LVVSARAQPHLTYVNIETLQQR-RVSLNEKEWDTHVSFTVMSMAASGDGKYLLAATDKSRNILWRAGGNARVRTLMGHTTDDYFQPRVQWDPSGLFSYCNSSGDHDVHVHCLASGRVVEQLKGHRAVIRDIHHDPFRSVLVTASYDKTVKVWG 178
            YF EAV+++ FV   RG   GG  E LV++ R  P L YV++        VSLN   WDTHVSF V+ + AS DG+YLLAATDK R+I++  G +   R L GH  D Y +PRV WD SG +   NS  D  V V CLAS RVV +L+GH+ +IRD+ H P R +L TASYD TVKVWG
Sbjct:  156 YFREAVDALAFVPSPRGSAPGGQAECLVMAPRGHPALKYVDLGAPSTPWEVSLNASAWDTHVSFNVLHLEASPDGRYLLAATDKDRHIIYPVGQHIHARELFGHAADAYAKPRVCWDSSGGYVLSNSQNDSGVFVWCLASQRVVHRLEGHKGIIRDLSHHPSRRLLATASYDHTVKVWG 334

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BLAST of mRNA_Ecto-sp13_S_contig1281.2323.1 vs. uniprot
Match: A0A7S2SGK4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SGK4_9STRA)

HSP 1 Score: 168 bits (426), Expect = 1.180e-46
Identity = 92/179 (51.40%), Postives = 114/179 (63.69%), Query Frame = 0

Query:    7 YFPEAVESVEFV---RGE--GGALE-LVVSARAQPHLTYVNIETLQQR-RVSLNEKEWDTHVSFTVMSMAASGDGKYLLAATDKSRNILWRAGGNARVRTLMGHTTDDYFQPRVQWDPSGLFSYCNSSGDHDVHVHCLASGRVVEQLKGHRAVIRDIHHDPFRSVLVTASYDKTVKVWG 178
            YF EAV+++ FV   RG   GG  E LV++ R  P L YV++        VSLN   WDTHVSF V+ + AS DG+YLLAATDK R+I++  G +   R L GH  D Y +PRV WD SG +   NS  D  V V CLAS RVV +L+GH+ +IRD+ H P R +L TASYD TVKVWG
Sbjct:  321 YFREAVDALAFVPSPRGSAPGGQAECLVMAPRGHPALKYVDLGAPSTPWEVSLNASAWDTHVSFNVLHLEASPDGRYLLAATDKDRHIIYPVGQHIHARELFGHAADAYAKPRVCWDSSGGYVLSNSQNDSGVFVWCLASQRVVHRLEGHKGIIRDLSHHPSRRLLATASYDHTVKVWG 499

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BLAST of mRNA_Ecto-sp13_S_contig1281.2323.1 vs. uniprot
Match: K8YTZ0_NANGC (Uncharacterized protein (Fragment) n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YTZ0_NANGC)

HSP 1 Score: 159 bits (401), Expect = 3.410e-43
Identity = 78/165 (47.27%), Postives = 113/165 (68.48%), Query Frame = 0

Query:   19 RGEGGALE-----LVVSARAQPHLTYVNIETLQQRRVSLNEKEWDTHVSFTVMSMAASGDGKYLLAATDKSRNILWRAGGNARVRTLMGHTTDDYFQPRVQWDPSGLFSYCNSSGDHDVHVHCLASGRVVEQLKGHRAVIRDIHHDPFRSVLVTASYDKTVKVWG 178
            RGEGG        L+V++R   HLTY++ ++ ++  VSLN   WDTHVSF+V+S+A S   ++LLAATDKSR IL+R G N ++R+L GH  D+Y  PRV WD +G + YC+S   +++    LAS RVV +LKGHRA++RD+  DP   +L + +YDKT+++W 
Sbjct:  312 RGEGGLSACSRPFLIVASRNVAHLTYIDCDSFEKHTVSLNNALWDTHVSFSVLSLAVSPCQEFLLAATDKSRVILYRIGHNEQLRSLYGHRADEYSNPRVAWDRNGNYVYCSSQEGNELVGWSLASERVVVKLKGHRALVRDMTFDPASCLLASIAYDKTLRLWS 476

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BLAST of mRNA_Ecto-sp13_S_contig1281.2323.1 vs. uniprot
Match: A0A482UUY4_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UUY4_9ARCH)

HSP 1 Score: 133 bits (334), Expect = 2.040e-35
Identity = 65/153 (42.48%), Postives = 94/153 (61.44%), Query Frame = 0

Query:   27 LVVSARAQPHLTYVNIETLQQRRVSLNEKEWDTHVSFTVMSMAASGDGKYLLAATDKSRNILWRAGGNARVRTLMGHTTDDYFQPRVQWDPSGLFSYCNSSGDHDVHVHCLASGRVVEQLKGHRAVIRDIHHDPFRSVLVTASYDKTVKVWGE 179
            L+V  R  P+L YVN  TL++  +S N+  WDTHVS T +S+A S   KYL   TDK  +I+++   N RV  L GHT+ DY +P   W  +  + Y NS G+  V+V+ + S RV  +L GH  V+R +   P+++ + +ASYDK+V VWGE
Sbjct:   92 LIVGVRDVPYLVYVNTHTLERTTISHNKHSWDTHVSITPLSLALSPCQKYLCVCTDKHIHIVYKLHTNVRVCVLGGHTSGDYSKPVCVWHHTSKYIYSNSEGESSVYVYDICSQRVCMKLHGHSNVVRGLAAHPYKASMASASYDKSVIVWGE 244

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BLAST of mRNA_Ecto-sp13_S_contig1281.2323.1 vs. uniprot
Match: A0A7S2ENR5_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2ENR5_TRICV)

HSP 1 Score: 133 bits (335), Expect = 7.930e-34
Identity = 75/180 (41.67%), Postives = 110/180 (61.11%), Query Frame = 0

Query:    6 LYFPEAVESVEFV-RGEGGALELVVSARAQPHLTYVNI-ETLQQRRVSLNE--KEWDTHVSFTVMSMAASGDGKYLLAATDKSRNILWRAGGNARVRTLMGHTTDDYFQPRVQWDPSGLFSYCNSSGDHDVHVHCLASGRVVEQLKG----HRAVIRDIHHDPFRSVLVTASYDKTVKVW 177
            ++ P  VE++ F+ RGE    +LV  AR  P+L+Y ++ +  +Q + ++N   K ++ HVSF +M +  S DGKYL AATD SRNI++ AG + ++R L GH  D + QP++ W  SG + + N+  D  V V  +AS  +V +L G    H + IRDI   P    LVTASYDKT+KVW
Sbjct:  262 MHLPGPVEAMCFLDRGE----QLVCYARDTPYLSYFDMTDGYKQTKYNVNSEVKGFEDHVSFAIMHLVPSPDGKYLAAATDTSRNIIFEAGSSKQIRNLYGHKNDGFSQPKIAWSSSGQYLFGNTQEDSSVCVWDIASASIVRRLDGSVGGHTSQIRDITSSPISDTLVTASYDKTIKVW 437

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BLAST of mRNA_Ecto-sp13_S_contig1281.2323.1 vs. uniprot
Match: A0A7S2VZ64_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2VZ64_9STRA)

HSP 1 Score: 125 bits (314), Expect = 2.920e-33
Identity = 69/159 (43.40%), Postives = 92/159 (57.86%), Query Frame = 0

Query:   27 LVVSARAQPHLTYVNIETLQQRRVSLNEKE----WDTHVSFTVMSMAASGDGKYLLAATDKSRNILWRAGGNARVRTLMGHTTDDYFQPRVQWDPSGLFSYCNSSGDHD--VHVHCLASGRVVEQLKG-HRAVIRDIHHDPFRSVLVTASYDKTVKVWG 178
            L+   R  P+LTY+NI+  +  + SLN       ++ HVSF VM +  S +GKY+ AATD SRNI+ + G +  +R L GH  D Y QPRV W  +G + + N+  D    V V  +AS  +V   KG HR  +RDI   P    LVTASYDK+VKVW 
Sbjct:   11 LIWYERDTPYLTYLNIQNWELIKYSLNGDNPAGGFEDHVSFAVMHLVVSPNGKYICAATDSSRNIIMQVGTSHIIRNLYGHQNDSYSQPRVAWSKNGKYIFGNAQDDGSTTVVVWDIASSEIVRYFKGIHRGKVRDIFSSPHSDTLVTASYDKSVKVWA 169

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BLAST of mRNA_Ecto-sp13_S_contig1281.2323.1 vs. uniprot
Match: A0A8J2WRM2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WRM2_9STRA)

HSP 1 Score: 123 bits (308), Expect = 3.340e-30
Identity = 71/176 (40.34%), Postives = 100/176 (56.82%), Query Frame = 0

Query:    6 LYFPEAVESVEFVRGEGGALELVVSARAQPHLTYVNIE--TLQQRRVSLNEKEWDTHVSFTVMSMAASGDGKYLLAATDKSRNILWRAGGNARVRTLMGHTTDDYFQPRVQWDPSGLFSYCNSSGDHDVHVHCLASGRVVEQL-KGHRAVIRDIHHDPFRSVLVTASYDKTVKVWG 178
            L  P   ES+ F  G     EL+V  R +P   +V IE  TL + RVSLNEK+WDTH SF V+ MA S DGKYL  ATD S++I++   GN  V+ L+GHT D+Y   R+ W    + S  NS  D  ++   + SG+V++++ + H   +RD+        L T S+DK  K+W 
Sbjct:  226 LVLPANPESLCFAPG---GKELIVYCRGEPFRRHVKIEEETLAETRVSLNEKDWDTHCSFAVLDMAVSPDGKYLACATDASKHIIYPLHGNEHVKVLVGHTADEYANARIAWLGESVVS--NSQKDPGLYQWDIGSGKVLKRVERAHGKAVRDLAVSD-DGTLATCSFDKAAKLWS 395

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig1281.2323.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig1281.2323.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G8L4_ECTSI	6.990e-126	96.67	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JKD0_9PHAE	3.960e-125	97.77	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A836CE45_9STRA	8.120e-60	54.19	WD40-repeat-containing domain protein n=1 Tax=Trib...	[more]
A0A7S2SGN2_9STRA	3.660e-48	51.40	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A7S2SGK4_9STRA	1.180e-46	51.40	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
K8YTZ0_NANGC	3.410e-43	47.27	Uncharacterized protein (Fragment) n=3 Tax=Monodop...	[more]
A0A482UUY4_9ARCH	2.040e-35	42.48	Uncharacterized protein n=1 Tax=archaeon TaxID=190...	[more]
A0A7S2ENR5_TRICV	7.930e-34	41.67	Hypothetical protein n=1 Tax=Trieres chinensis Tax...	[more]
A0A7S2VZ64_9STRA	2.920e-33	43.40	Hypothetical protein n=1 Tax=Eucampia antarctica T...	[more]
A0A8J2WRM2_9STRA	3.340e-30	40.34	Hypothetical protein n=1 Tax=Pelagomonas calceolat...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 139..178 e-value: 1.7E-5 score: 34.3
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 143..177 e-value: 4.0E-4 score: 21.1
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 146..180 score: 12.915
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 9..179 e-value: 7.7E-19 score: 69.7
None	No IPR available	PANTHER	PTHR19848	WD40 REPEAT PROTEIN	coord: 10..177
IPR017986	WD40-repeat-containing domain	PROSITE	PS50294	WD_REPEATS_REGION	coord: 146..180 score: 12.051
IPR011047	Quinoprotein alcohol dehydrogenase-like superfamily	SUPERFAMILY	50998	Quinoprotein alcohol dehydrogenase-like	coord: 53..178

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig1281	contig	Ecto-sp13_S_contig1281:936..2976 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig1281.2323.1	mRNA_Ecto-sp13_S_contig1281.2323.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig1281 936..2976 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig1281.2323.1 ID=prot_Ecto-sp13_S_contig1281.2323.1|Name=mRNA_Ecto-sp13_S_contig1281.2323.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=181bp
VQATQLYFPEAVESVEFVRGEGGALELVVSARAQPHLTYVNIETLQQRRV
SLNEKEWDTHVSFTVMSMAASGDGKYLLAATDKSRNILWRAGGNARVRTL
MGHTTDDYFQPRVQWDPSGLFSYCNSSGDHDVHVHCLASGRVVEQLKGHR
AVIRDIHHDPFRSVLVTASYDKTVKVWGER*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001680	WD40_repeat
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR017986	WD40_repeat_dom
IPR011047	Quinoprotein_ADH-like_supfam