prot_Ecto-sp13_S_contig12802.2318.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig12802.2318.1
Unique Name	prot_Ecto-sp13_S_contig12802.2318.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	242

Homology

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BLAST of mRNA_Ecto-sp13_S_contig12802.2318.1 vs. uniprot
Match: A0A6H5KQR0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQR0_9PHAE)

HSP 1 Score: 301 bits (770), Expect = 2.860e-90
Identity = 225/242 (92.98%), Postives = 231/242 (95.45%), Query Frame = 0

Query:    1 ERLKEAARLKKQSDERVAELEPEVERLAARCKELVQQKDITSEERARIENALRQQHRLADEQRVQEAANRLAGLEQEKHNLLSRVLEAEARADRQRRAVEDMVLALEQAMGNQAALKAAAATQRADDAVRESSPIPGVDTTEAEKAAREKAAGLQEELSKANIRVDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAAVASGPSGHQQDMFEVEAILKAEVRDLEER 242
            E+LKEAARLKKQSDERVAELEPEVERLAARCKELVQQKDITSEERARIENALRQQHRLADEQRVQE ANRLAGLEQE+ NLLSRVLEAEA ADR R AVED+VL LEQAMG QAALKAAAATQRA+DAVRESSP PGVDTTEAEKAAREKAAGLQEELSKANIRV+DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+ A ASGPS HQQDMFEVEAILKAEVRDLEER
Sbjct:  259 EKLKEAARLKKQSDERVAELEPEVERLAARCKELVQQKDITSEERARIENALRQQHRLADEQRVQETANRLAGLEQEQQNLLSRVLEAEANADRHRHAVEDLVLVLEQAMGTQAALKAAAATQRAEDAVRESSPTPGVDTTEAEKAAREKAAGLQEELSKANIRVEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETAAASGPSEHQQDMFEVEAILKAEVRDLEER 500

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BLAST of mRNA_Ecto-sp13_S_contig12802.2318.1 vs. uniprot
Match: D7FYB0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYB0_ECTSI)

HSP 1 Score: 279 bits (714), Expect = 9.790e-83
Identity = 210/229 (91.70%), Postives = 218/229 (95.20%), Query Frame = 0

Query:   14 DERVAELEPEVERLAARCKELVQQKDITSEERARIENALRQQHRLADEQRVQEAANRLAGLEQEKHNLLSRVLEAEARADRQRRAVEDMVLALEQAMGNQAALKAAAATQRADDAVRESSPIPGVDTTEAEKAAREKAAGLQEELSKANIRVDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAAVASGPSGHQQDMFEVEAILKAEVRDLEER 242
            DER+AELEPE+ERLA RCKELVQQKDITSEERARIENALRQQHRLADEQRVQ+ ANRLA LEQE+HNLLSRVLEAEA ADRQRRAVED+VL LEQAM  QAALKAAAATQRA+DAVRESSP PGVDTTEAE AAREKAAGLQEELSKANIRV+DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAA ASGPS HQQDMF+VEAILKAEVRDLEER
Sbjct:  672 DERIAELEPELERLAVRCKELVQQKDITSEERARIENALRQQHRLADEQRVQDTANRLAALEQEQHNLLSRVLEAEAEADRQRRAVEDLVLVLEQAMSTQAALKAAAATQRAEDAVRESSPEPGVDTTEAENAAREKAAGLQEELSKANIRVEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAAAASGPSEHQQDMFQVEAILKAEVRDLEER 900

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig12802.2318.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig12802.2318.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KQR0_9PHAE	2.860e-90	92.98	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FYB0_ECTSI	9.790e-83	91.70	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 57..91
None	No IPR available	COILS	Coil	Coil	coord: 144..209
None	No IPR available	COILS	Coil	Coil	coord: 24..51

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig12802	contig	Ecto-sp13_S_contig12802:826..3330 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig12802.2318.1	mRNA_Ecto-sp13_S_contig12802.2318.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig12802 826..3330 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig12802.2318.1 ID=prot_Ecto-sp13_S_contig12802.2318.1|Name=mRNA_Ecto-sp13_S_contig12802.2318.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=242bp
ERLKEAARLKKQSDERVAELEPEVERLAARCKELVQQKDITSEERARIEN
ALRQQHRLADEQRVQEAANRLAGLEQEKHNLLSRVLEAEARADRQRRAVE
DMVLALEQAMGNQAALKAAAATQRADDAVRESSPIPGVDTTEAEKAAREK
AAGLQEELSKANIRVDDLQQELTRAEQKAMEAVHEQKRAREAVERAALAE
EQARAAAEAAKAAVASGPSGHQQDMFEVEAILKAEVRDLEER