prot_Ecto-sp13_S_contig1280.2316.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1280.2316.1
Unique Nameprot_Ecto-sp13_S_contig1280.2316.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length323
Homology
BLAST of mRNA_Ecto-sp13_S_contig1280.2316.1 vs. uniprot
Match: D7FK07_ECTSI (Calmodulin-binding WW domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK07_ECTSI)

HSP 1 Score: 409 bits (1050), Expect = 1.740e-126
Identity = 258/312 (82.69%), Postives = 265/312 (84.94%), Query Frame = 0
Query:    1 EEPLELTRCSECHRRVGDRRCKSCEADLCDSCQVFTHARTCHRAEEKGRKGSSTAGGGNSGKHAPKRASSCGAVGCGGRHPAVTKRQKRETDEVFASITLEGTELKGDLRTLYALDRILGVVEDSSEDTATTEAGAAKXXXXRKGGENETDTKEEGEEDKEKGEVEKEEIDEMPLVCDVCGKTPDVECEECGTVYCSNTWVGNPGCFIRDHERGNRRKHTKRGYTHAKDLLNRAKRKEXXXXXXXXXXXXQNGEARRDEKADKKRRLKLAQERELARXXXXXXXXXXXXXXXXXXRKVRAAGLNPYLLPRLR 312
            EEPLEL RCSECHRRVGDRRC+SCE DLCDSCQ FTHARTC  A E+GRKGSSTAGG +SGKHAPKRASS GAVGCGGRHPAVTKRQKRETDE+FAS+TLEGTELKGDLRTLYALDRILGVVEDSSEDTA        XXXX                          EIDEMPLVCDVCGKTPDVECEECGTVYCSNTWVGNPGCFIRDHERGNRRKHTKRGYTHAKDLL RAKRK XXXXXXXXXXXXQNGEARRDEKA++KRRLKLAQERELARXXXXXXXXXXXXXXXXXX K RAAGLNP LLPRLR
Sbjct: 3582 EEPLELPRCSECHRRVGDRRCESCEVDLCDSCQAFTHARTCPHANEEGRKGSSTAGGDHSGKHAPKRASSSGAVGCGGRHPAVTKRQKRETDEIFASLTLEGTELKGDLRTLYALDRILGVVEDSSEDTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIDEMPLVCDVCGKTPDVECEECGTVYCSNTWVGNPGCFIRDHERGNRRKHTKRGYTHAKDLLKRAKRKXXXXXXXXXXXXXQNGEARRDEKANRKRRLKLAQERELARXXXXXXXXXXXXXXXXXXXKARAAGLNPSLLPRLR 3893          
BLAST of mRNA_Ecto-sp13_S_contig1280.2316.1 vs. uniprot
Match: A0A6H5KMU5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMU5_9PHAE)

HSP 1 Score: 174 bits (441), Expect = 2.730e-51
Identity = 98/103 (95.15%), Postives = 99/103 (96.12%), Query Frame = 0
Query:  173 MPLVCDVCGKTPDVECEECGTVYCSNTWVGNPGCFIRDHERGNRRKHTKRGYTHAKDLLNRAKRKEXXXXXXXXXXXXQNGEARRDEKADKKRRLKLAQEREL 275
            MPLVCDVCGKTPDVECEECGTVYCSNTWVGNPGCFIRDHERGNRRKHTKRGYTHAKDLL RAK   XXXXXXXXXXXXQNGEARRDEKADKKRRLKLAQERE+
Sbjct:    1 MPLVCDVCGKTPDVECEECGTVYCSNTWVGNPGCFIRDHERGNRRKHTKRGYTHAKDLLKRAKXXXXXXXXXXXXXXXQNGEARRDEKADKKRRLKLAQEREV 103          
BLAST of mRNA_Ecto-sp13_S_contig1280.2316.1 vs. uniprot
Match: A0A7S4MK78_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MK78_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 8.330e-9
Identity = 27/55 (49.09%), Postives = 38/55 (69.09%), Query Frame = 0
Query:  184 PDVECEECGTVYCSNTWVGNPGCFIRDHERGNRRKHTKRGYTHAKDLLNRAKRKE 238
            PDV C ECG VYCS TW+GNPGCF + H RGNR  H+ + + + ++ +N  + +E
Sbjct:   68 PDVRCRECGDVYCSITWLGNPGCFRQMHSRGNRTTHSAKPWPNVQNRVNEIREEE 122          
BLAST of mRNA_Ecto-sp13_S_contig1280.2316.1 vs. uniprot
Match: A0A7S2NUD7_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NUD7_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 2.600e-8
Identity = 26/47 (55.32%), Postives = 30/47 (63.83%), Query Frame = 0
Query:  173 MPLVCDVCGKTPDVECEECGTVYCSNTWVGNPGCFIRDHERGNRRKH 219
             P  C VC   PD  CE+CG VYCS TW+GNPGCF + H +G R  H
Sbjct:  660 FPPTCSVCANPPDKLCEDCGEVYCSATWIGNPGCFRKMHVKGERLHH 706          
BLAST of mRNA_Ecto-sp13_S_contig1280.2316.1 vs. uniprot
Match: A0A7S2CNG6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CNG6_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 4.850e-6
Identity = 22/37 (59.46%), Postives = 28/37 (75.68%), Query Frame = 0
Query:  194 VYCSNTWVGNPGCFIRDHERGNRRKHTKRGYTHAKDL 230
            VYCS  W+GNPGCF + H +GNRR HTK  YT+ ++L
Sbjct:   72 VYCSVKWMGNPGCFAKQHRKGNRRTHTKEPYTYMEEL 108          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1280.2316.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FK07_ECTSI1.740e-12682.69Calmodulin-binding WW domain protein n=1 Tax=Ectoc... [more]
A0A6H5KMU5_9PHAE2.730e-5195.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S4MK78_9STRA8.330e-949.09Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
A0A7S2NUD7_9STRA2.600e-855.32Hypothetical protein n=2 Tax=Leptocylindrus danicu... [more]
A0A7S2CNG6_9STRA4.850e-659.46Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 224..258
NoneNo IPR availableCOILSCoilCoilcoord: 269..296
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 21..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1280contigEcto-sp13_S_contig1280:4763..7606 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1280.2316.1mRNA_Ecto-sp13_S_contig1280.2316.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1280 4763..8184 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1280.2316.1 ID=prot_Ecto-sp13_S_contig1280.2316.1|Name=mRNA_Ecto-sp13_S_contig1280.2316.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=323bp
EEPLELTRCSECHRRVGDRRCKSCEADLCDSCQVFTHARTCHRAEEKGRK
GSSTAGGGNSGKHAPKRASSCGAVGCGGRHPAVTKRQKRETDEVFASITL
EGTELKGDLRTLYALDRILGVVEDSSEDTATTEAGAAKQQKKRKGGENET
DTKEEGEEDKEKGEVEKEEIDEMPLVCDVCGKTPDVECEECGTVYCSNTW
VGNPGCFIRDHERGNRRKHTKRGYTHAKDLLNRAKRKEKEEKERKERESR
QNGEARRDEKADKKRRLKLAQERELARELRLQKEAKKELKRRIRRRKVRA
AGLNPYLLPRLRAPFEYLRALR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type