mRNA_Ecto-sp13_S_contig128.2313.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig128.2313.1
Unique NamemRNA_Ecto-sp13_S_contig128.2313.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig128.2313.1 vs. uniprot
Match: D7FZM7_ECTSI (Homogentisate 1,2-dioxygenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZM7_ECTSI)

HSP 1 Score: 799 bits (2063), Expect = 9.170e-289
Identity = 387/430 (90.00%), Postives = 402/430 (93.49%), Query Frame = 1
Query:    1 VSYNSGFGNHFSTEALPGAPPAGQNNPTRYPYDLYAEQLSGTAFTAPRARNRRIWCYRIRPSVSHRPFQSVAANPFENDFTSMKNVPSQMRWLPLPIPSR-QQKLRMDFIEGISTMSGVGIPAAKSGLGIYLYAMNSDMGDKAFYNADGEMLLVPQQGSLRVKTEMGILLVVPNEILEMPRGVQFSVDLGIGELGARGYVLETFEGHFLLPEMGPIGSNGLANPRDFESPVAWYEDRDVPYTVLTKFGGKLFSSAIDHSPFDVVAWHGNMTPYKYDLRKFICINSVSKDHPDPSIYTILTCPSAATPGVAVADFVVFPPRWMLAEGTFRPRWYHRNTMTEFTGMVWGKYDAKQGFLPGGSSLHPSMSAHGPDAATFIGASDEKVRYPVILYARSHGLAFMFETKYQLKLTVSVTEGKHRDREYLECWRHL 1287
            VSYNSGFGNHFSTEALPGA PAGQNNP R PY LYAEQ+SGTAFTAPRARNRR WCYRIRPSVSHRPFQSVAANPFENDF +MKN PSQMRW PLPIPSR +QK+R+DFIEGISTM GVG PAAKSGLGIYLYAMNSDMGDKAFYNADGEMLLVPQQGSLRVKTEMGILLVVPNEIL +PRGV+FSVDLGI E GARGYVLETFEGHFLLPE+GPIGSNGLANPRDFESPVAWYEDRDVPYTVLTKFGGKLFSSA+DHSPFDVVAWHGNMTPYKYDLRKFICINSVSKDHPDPSIYT+LTCPSAATPGVAV DFVVFPPRWM+AEGTFRP WYHRNTMTEF GMVWGKYDAKQGFLPGGSSLHPSMSAHGPDAATFIGASDEK     + + +  GLAFMFETKYQLKLT S TEGKHRD+EYLECWRHL
Sbjct:   91 VSYNSGFGNHFSTEALPGALPAGQNNPKRCPYGLYAEQISGTAFTAPRARNRRTWCYRIRPSVSHRPFQSVAANPFENDFIAMKNDPSQMRWSPLPIPSRVKQKMRVDFIEGISTMGGVGDPAAKSGLGIYLYAMNSDMGDKAFYNADGEMLLVPQQGSLRVKTEMGILLVVPNEILVIPRGVKFSVDLGIAESGARGYVLETFEGHFLLPELGPIGSNGLANPRDFESPVAWYEDRDVPYTVLTKFGGKLFSSAMDHSPFDVVAWHGNMTPYKYDLRKFICINSVSKDHPDPSIYTVLTCPSAATPGVAVVDFVVFPPRWMVAEGTFRPPWYHRNTMTEFMGMVWGKYDAKQGFLPGGSSLHPSMSAHGPDAATFIGASDEKKAPLPVKFDK--GLAFMFETKYQLKLTASATEGKHRDQEYLECWRHL 518          
BLAST of mRNA_Ecto-sp13_S_contig128.2313.1 vs. uniprot
Match: A0A6H5JH36_9PHAE (Homogentisate 1,2-dioxygenase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH36_9PHAE)

HSP 1 Score: 607 bits (1565), Expect = 1.130e-214
Identity = 317/435 (72.87%), Postives = 336/435 (77.24%), Query Frame = 1
Query:   31 FSTEALPGAPPAGQNNPTRYPYDLYAEQLSGTAFTAPRARNRRIWCYRIRPSVSHRPFQSVAANPFENDFTSMKNVPSQMRWLPLPIPSRQQKLRMDFIE-GISTMSGVGIPAAKSGLGIYLYAMNSDMGDKAFYNADGEMLLVPQQGSLRVKTEMGILLVVPNEILEMPRGVQFSVDLGIGELGARGYVLETFEGHFLLPEMGPIGSNGLANPRDFESPVAWYEDRDVPYTVLTKFGGKLFSSAIDHSPFDVVAWHGNMTPYKYDLRKFICINSVSKDHPDPSIYTILTCPSAATPGVAVADFVVFPPRWMLAEGTFRPRWYHRNTMTEFTGMVWGKYDAKQGFLPGGSSLHPSMSAHGPDAATFIGASDEKVRYPVIL-YAR------SHGLAFMFETKYQLKLTVSVTEGKHRDREYLECWRHLPKNFTPDA 1311
            F   A  G  PAG+NNP R PY LYAEQ+SGTAFTAPRARNRR  CYRIRPSV HRPFQSVAA+PFENDF SM N PSQMRWLPLPIPSRQQ +    +  G STMSGVG PAAK GLGIYL+AMNSDMGDK     DG        GS             P+ IL +PRGV+FSVD GIGELGARGYVLETFEGHFLLPE+GPIGSNGLANPRDFESP                FGGKLFSSA+DHSPF VVA HGNMTPYKYDLRKFICINSVSKDHPDPSIYT+LTCPSAATPGVAV DFVVFPPRWM+AEGTFRP WYHRNTM EF GMVW KYDAK+GFLPGGSSLHP MSAHGPDAATF+GASDEK+    +  ++R        GLAFMFET  Q KLTVS TEGKHRDR YLECWRHLPKNFTP A
Sbjct:   29 FDGGAPAGTLPAGENNPKRCPYGLYAEQISGTAFTAPRARNRRTRCYRIRPSVLHRPFQSVAADPFENDFKSMNNDPSQMRWLPLPIPSRQQDIYAGGLHRGHSTMSGVGDPAAKGGLGIYLFAMNSDMGDKV----DGY-----PAGS-------------PSAILVIPRGVKFSVDRGIGELGARGYVLETFEGHFLLPELGPIGSNGLANPRDFESP----------------FGGKLFSSAVDHSPFGVVALHGNMTPYKYDLRKFICINSVSKDHPDPSIYTVLTCPSAATPGVAVVDFVVFPPRWMVAEGTFRPPWYHRNTMAEFMGMVWEKYDAKEGFLPGGSSLHPYMSAHGPDAATFVGASDEKLLVNRLTEWSRPLPVKFDKGLAFMFETNSQPKLTVSATEGKHRDRGYLECWRHLPKNFTPYA 425          
BLAST of mRNA_Ecto-sp13_S_contig128.2313.1 vs. uniprot
Match: A0A7S2S237_9STRA (Homogentisate 1,2-dioxygenase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S237_9STRA)

HSP 1 Score: 515 bits (1326), Expect = 1.300e-178
Identity = 259/429 (60.37%), Postives = 317/429 (73.89%), Query Frame = 1
Query:   16 GFGNHFSTEALPGAPPAGQNNPTRYPYDLYAEQLSGTAFTAPRARNRRIWCYRIRPSVSHRPFQSVAANPFENDFTSMKNV-PSQMRWLPLPIPSRQQKLRMDFIEGISTMSGVGIPAAKSGLGIYLYAMNSDMGDKAFYNADGEMLLVPQQGSLRVKTEMGILLVVPNEILEMPRGVQFSVDLGIGELGARGYVLETFEGHFLLPEMGPIGSNGLANPRDFESPVAWYEDRDVPYTVLTKFGGKLFSSAIDHSPFDVVAWHGNMTPYKYDLRKFICINSVSKDHPDPSIYTILTCPSAATPGVAVADFVVFPPRWMLAEGTFRPRWYHRNTMTEFTGMVWGKYDAKQGFLPGGSSLHPSMSAHGPDAATFIGASDEKVRYPVILYARSHGLAFMFETKYQLKLTVSVTEGKHRDREYLECWRHLPKNF 1299
            GFGN F++EALPG+ P GQNNP + PY LYAEQLSGTAFTAPR +N+R W YRIRPSV H  F+ + A     D+     V PSQ RW P  +P  +  +  DF+EG+ TM+G G    K+GL I++Y  N+ MGDKAF N+DG++L+VP  G+L V+TE+G+L V P EI  +PRG++FSV +  G +  RGYVLE ++GHF LP +GPIGSN LAN RDF +P A +EDRDVPY V+ KFGGKLF + +DHSPFDVVAWHGN  P+KYDL +F CINSV+ DHPDPSIYT+LT PS  TPGVAVADFV+FPPRWM+ E TFRP WYHRN M+EF GMV+GKYDAK+GF+PGG+SLH  MSAHGPDAAT   AS   ++ PV   A   GLAFMFE+ Y LKLT    +   RD++YL CW  LPK+F
Sbjct:   22 GFGNEFTSEALPGSLPVGQNNPQQCPYKLYAEQLSGTAFTAPRDKNKRTWLYRIRPSVLHGAFEEMDAGRIVTDWGREGRVDPSQFRWAPPAMPPAETAV--DFVEGLVTMAGNGDATLKTGLAIHMYTANASMGDKAFCNSDGDLLIVPDTGALTVQTELGVLEVAPKEIAVVPRGMRFSVAVA-GPV--RGYVLELYQGHFELPNLGPIGSNCLANARDFLTPRARFEDRDVPYMVINKFGGKLFRATMDHSPFDVVAWHGNYVPFKYDLTRFCCINSVTFDHPDPSIYTVLTAPSD-TPGVAVADFVIFPPRWMVMEDTFRPPWYHRNCMSEFMGMVYGKYDAKEGFMPGGASLHSCMSAHGPDAATHAKASTGDLQ-PVKFDA---GLAFMFESTYMLKLTQYALDAPWRDQDYLHCWDGLPKHF 440          
BLAST of mRNA_Ecto-sp13_S_contig128.2313.1 vs. uniprot
Match: A0A485KU48_9STRA (Homogentisate 1,2-dioxygenase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KU48_9STRA)

HSP 1 Score: 509 bits (1310), Expect = 7.790e-176
Identity = 246/437 (56.29%), Postives = 314/437 (71.85%), Query Frame = 1
Query:    1 VSYNSGFGNHFSTEALPGAPPAGQNNPTRYPYDLYAEQLSGTAFTAPRARNRRIWCYRIRPSVSHRPFQSVAANPFENDFTSMKNVPSQMRWLPLPIPSRQQKLRMDFIEGISTMSGVGIPAAKSGLGIYLYAMNSDMGDKAFYNADGEMLLVPQQGSLRVKTEMGILLVVPNEILEMPRGVQFSVDLGIGELGARGYVLETFEGHFLLPEMGPIGSNGLANPRDFESPVAWYEDRDVPYTVLTKFGGKLFSSAIDHSPFDVVAWHGNMTPYKYDLRKFICINSVSKDHPDPSIYTILTCPSAATPGVAVADFVVFPPRWMLAEGTFRPRWYHRNTMTEFTGMVWGKYDAK--QGFLPGGSSLHPSMSAHGPDAATFIGASDEKVRYPVILYARSHGLAFMFETKYQLKLTVSVTEGKHRDREYLECWRHLPKNFTP 1305
            + YN GFGNHF+TE LPGA P   NNP +  Y LY EQLSGTAFT PR  N+R W YRI P V H  + +V+      DF +    P Q+RW P+ +P+    +  DFI+G+ TM G G P  K+G+ +++YA N+ M DK FYN+DG+ L+VPQ+G+L++ TEMG LLV P+EI+ +PRG++FS+D+  G +  RGYVLE +  HF+LP++GPIG+NGLANPRDFESPVAWYEDRDV YTV+TKF G++FS+ + HSPF+VVAWHGN  PYKY+L  F  +NSV+ DHPDPSIYT+LTC     PGVAVADFV+FPPRWM+ E TFRP +YHRN MTEF GM++G YDAK   GF+PGG+SLH   +AHGPDA TF+ AS+  ++ PV       GLAFMFE+ Y +K+T    +    D EY +CW  LPK F P
Sbjct:   38 LKYNVGFGNHFATECLPGALPEHMNNPQKCNYGLYCEQLSGTAFTLPRHSNQRTWFYRILPPVVHDEYVNVSVGDIVTDFANEHTTPQQLRWKPMELPAASSSV--DFIQGLRTMGGAGDPTLKAGMSVHMYAANASMVDKCFYNSDGDWLIVPQEGALKITTEMGKLLVSPHEIVVIPRGIRFSIDVD-GPI--RGYVLEVYNRHFVLPDLGPIGANGLANPRDFESPVAWYEDRDVDYTVVTKFAGEMFSAHMTHSPFNVVAWHGNYVPYKYNLDHFCTMNSVNYDHPDPSIYTVLTC-QTDEPGVAVADFVIFPPRWMVQEKTFRPPYYHRNHMTEFMGMIYGHYDAKTDDGFVPGGASLHSCHTAHGPDAETFLAASNADLK-PVKFEG---GLAFMFESNYMMKVTDYAMKCPQMDHEYYKCWHPLPKLFNP 464          
BLAST of mRNA_Ecto-sp13_S_contig128.2313.1 vs. uniprot
Match: A0A067CLV5_SAPPC (Homogentisate 1,2-dioxygenase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CLV5_SAPPC)

HSP 1 Score: 506 bits (1303), Expect = 4.330e-175
Identity = 247/440 (56.14%), Postives = 317/440 (72.05%), Query Frame = 1
Query:    1 VSYNSGFGNHFSTEALPGAPPAGQNNPTRYPYDLYAEQLSGTAFTAPRARNRRIWCYRIRPSVSHRPFQSVAANPFENDFTSMKNVPSQMRWLPLPIPSRQQKLRMDFIEGISTMSGVGIPAAKSGLGIYLYAMNSDMGDKAFYNADGEMLLVPQQGSLRVKTEMGILLVVPNEILEMPRGVQFSVDLGIGELGARGYVLETFEGHFLLPEMGPIGSNGLANPRDFESPVAWYEDRDVPYTVLTKFGGKLFSSAIDHSPFDVVAWHGNMTPYKYDLRKFICINSVSKDHPDPSIYTILTCPSAATPGVAVADFVVFPPRWMLAEGTFRPRWYHRNTMTEFTGMVWGKYDAKQ--GFLPGGSSLHPSMSAHGPDAATFIGASDEKVRYPVILYARSHGLAFMFETKYQLKLTVSVTEGKHRDREYLECWRHLPKNFTPDAK 1314
            ++Y+ GFGNHF +E L GA PA  NNP    Y LY EQLSGTAFT PR +N+R W YRI P V H  + + A+N    DF +    P Q+RW P+ +PS  +K+  DFI+G  TMSG G P+ K+G+ +++YA NS MGDK FYN+DG++L+VPQ+G+L++ TEMG LLV P+EI  + RG++F+VDL   +  ARGY+LE +  HF+LP++GPIG+NGLANPRDFE PVAWYEDRDV YTV+TKF GK+F + +  SPF+VVAWHGN  PYKY+L  F  +NSV+ DHPDPSIYT+LTC     PGVAVADFV+FPPRWM+ E TFRP +YHRN M+EF GMV+G YDAK   GF+PGG+SLH   +AHGPDA TF+ AS   ++ PV     + GLAFMFE+ Y LK+T         +++Y +CW+ LPK F P  K
Sbjct:   17 LAYHVGFGNHFCSEVLEGALPANMNNPQVCNYGLYCEQLSGTAFTLPRHKNQRTWLYRILPPVVHNEYTATASNAVVTDFATENVTPQQLRWQPMALPSSHEKV--DFIQGWKTMSGAGDPSLKTGMAVHMYAANSSMGDKCFYNSDGDLLIVPQEGALKITTEMGKLLVSPHEICVIQRGIRFTVDL---DGPARGYILEVYNRHFILPDLGPIGANGLANPRDFEHPVAWYEDRDVEYTVVTKFAGKMFLAGMQFSPFNVVAWHGNYVPYKYNLDHFCTMNSVNYDHPDPSIYTVLTC-QTDEPGVAVADFVIFPPRWMVQEKTFRPPYYHRNHMSEFMGMVYGHYDAKAEGGFVPGGASLHSVHTAHGPDAETFLAASKADLK-PVHF---TGGLAFMFESTYLLKVTDYALTCPQLEKDYYKCWQPLPKLFNPKKK 446          
BLAST of mRNA_Ecto-sp13_S_contig128.2313.1 vs. uniprot
Match: A0A1V9ZCB2_9STRA (Homogentisate 1,2-dioxygenase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZCB2_9STRA)

HSP 1 Score: 503 bits (1296), Expect = 4.190e-174
Identity = 243/439 (55.35%), Postives = 313/439 (71.30%), Query Frame = 1
Query:    1 VSYNSGFGNHFSTEALPGAPPAGQNNPTRYPYDLYAEQLSGTAFTAPRARNRRIWCYRIRPSVSHRPFQSVAANPFENDFTSMKNVPSQMRWLPLPIPSRQQKLRMDFIEGISTMSGVGIPAAKSGLGIYLYAMNSDMGDKAFYNADGEMLLVPQQGSLRVKTEMGILLVVPNEILEMPRGVQFSVDLGIGELGARGYVLETFEGHFLLPEMGPIGSNGLANPRDFESPVAWYEDRDVPYTVLTKFGGKLFSSAIDHSPFDVVAWHGNMTPYKYDLRKFICINSVSKDHPDPSIYTILTCPSAATPGVAVADFVVFPPRWMLAEGTFRPRWYHRNTMTEFTGMVWGKYDAK-QGFLPGGSSLHPSMSAHGPDAATFIGASDEKVRYPVILYARSHGLAFMFETKYQLKLTVSVTEGKHRDREYLECWRHLPKNFTPDAK 1314
            + YN GFGNHF++EAL GA PA  NNP +  Y LY EQLSGTAFT PR  N+R W YRI P V H  ++ +      NDF+     P Q+RW P+ +P    K+  DFI+G  TM+G G P  K+G+ +++YA N  MGDKAFYN+DG++L+VPQQG+L++ TEMG LLV P+EI  + RG++F+V++   +   RGY+LE +  HF+LP++GPIG+NGLANPRDFESPVAWYEDRDV YT++ KFGGKLF++ + HSPFDVVAWHGN  PYKY+L  F  +NSV+ DHPDPSIYT+LTC     PG AVADFV+FPPRWM+ E TFRP +YHRN M+EF GM++G YDAK +GF+PGG+SLH   SAHGPDA TF  AS   ++     +    GLAFMFE+ Y +KLT         +++Y +CW+ L K+F P  K
Sbjct:   11 LKYNVGFGNHFASEALEGALPAHMNNPQQCNYGLYCEQLSGTAFTLPRHSNQRTWFYRILPPVLHEQYKEINNGDIVNDFSDQTLTPQQLRWQPMALPKNTDKI--DFIQGWHTMAGAGEPTMKAGMAVHMYAANVSMGDKAFYNSDGDLLIVPQQGALKITTEMGKLLVSPHEICVIQRGIRFNVEV---DGPVRGYILEVYNRHFVLPDLGPIGANGLANPRDFESPVAWYEDRDVDYTIVGKFGGKLFTAQMKHSPFDVVAWHGNYVPYKYNLDHFCTMNSVNYDHPDPSIYTVLTC-QTDEPGCAVADFVIFPPRWMVQEKTFRPPYYHRNCMSEFMGMIYGHYDAKAEGFVPGGASLHSVDSAHGPDATTFENASKADLKP----FYFDGGLAFMFESSYLMKLTKYGLNCPQNEKDYWKCWQPLTKHFNPLKK 439          
BLAST of mRNA_Ecto-sp13_S_contig128.2313.1 vs. uniprot
Match: A0A067D521_SAPPC (Homogentisate 1,2-dioxygenase n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067D521_SAPPC)

HSP 1 Score: 503 bits (1296), Expect = 5.350e-174
Identity = 243/439 (55.35%), Postives = 314/439 (71.53%), Query Frame = 1
Query:    1 VSYNSGFGNHFSTEALPGAPPAGQNNPTRYPYDLYAEQLSGTAFTAPRARNRRIWCYRIRPSVSHRPFQSVAANPFENDFTSMKNVPSQMRWLPLPIPSRQQKLRMDFIEGISTMSGVGIPAAKSGLGIYLYAMNSDMGDKAFYNADGEMLLVPQQGSLRVKTEMGILLVVPNEILEMPRGVQFSVDLGIGELGARGYVLETFEGHFLLPEMGPIGSNGLANPRDFESPVAWYEDRDVPYTVLTKFGGKLFSSAIDHSPFDVVAWHGNMTPYKYDLRKFICINSVSKDHPDPSIYTILTCPSAATPGVAVADFVVFPPRWMLAEGTFRPRWYHRNTMTEFTGMVWGKYDAK-QGFLPGGSSLHPSMSAHGPDAATFIGASDEKVRYPVILYARSHGLAFMFETKYQLKLTVSVTEGKHRDREYLECWRHLPKNFTPDAK 1314
            +SY  GFGNHF++E L GA PA QNNP    Y LY EQLSGTAFT PR  N+R W YR+ P V H  +  + +    NDF +    P Q+RW P+ +P+  +K+  DFI+G  TM+G G P  K+G+ I++YA N+ MGDK FYN+DG++L+VPQ+G+L++ TEMG LLV P+EI  + RG++F+V+L   +  ARGY+LE +  HF+LP++GPIG+NGLANPRDFE PVAWYEDRDV YTV+ KFGGKLF++A++HSPFDVVAWHGN  PYKY+L  +  +NSV+ DHPDPSIYT+LTC     PG AVADFV+FPPRWM+ E TFRP +YHRN M+EF GM++G YDAK  GF+PGG+SLH   SAHGPDA TF  AS   ++          GLAFMFE+ Y +KLT         +++Y +CW+ L K+F P  K
Sbjct:   18 LSYQPGFGNHFASEVLEGALPAHQNNPQMCNYGLYCEQLSGTAFTLPRHSNQRTWLYRVLPPVIHGKYADLPSGDIVNDFANETLTPQQLRWQPMAMPTASEKV--DFIQGWHTMAGAGEPTMKAGMAIHMYAANASMGDKCFYNSDGDLLIVPQEGALKITTEMGKLLVSPHEICVIQRGIRFNVEL---DGPARGYILEVYNRHFVLPDLGPIGANGLANPRDFEHPVAWYEDRDVHYTVVGKFGGKLFTAAMEHSPFDVVAWHGNYVPYKYNLDHYCTMNSVNYDHPDPSIYTVLTC-QTDEPGCAVADFVIFPPRWMVQEKTFRPPYYHRNVMSEFMGMIYGHYDAKADGFVPGGASLHSIDSAHGPDATTFENASKADLQPHYF----GGGLAFMFESSYMMKLTKYALTCDQNEQDYYKCWQPLKKHFNPLKK 446          
BLAST of mRNA_Ecto-sp13_S_contig128.2313.1 vs. uniprot
Match: A0A024UNF4_9STRA (Homogentisate 1,2-dioxygenase n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A024UNF4_9STRA)

HSP 1 Score: 499 bits (1286), Expect = 2.580e-172
Identity = 244/439 (55.58%), Postives = 311/439 (70.84%), Query Frame = 1
Query:    1 VSYNSGFGNHFSTEALPGAPPAGQNNPTRYPYDLYAEQLSGTAFTAPRARNRRIWCYRIRPSVSHRPFQSVAANPFENDFTSMKNVPSQMRWLPLPIPSRQQKLRMDFIEGISTMSGVGIPAAKSGLGIYLYAMNSDMGDKAFYNADGEMLLVPQQGSLRVKTEMGILLVVPNEILEMPRGVQFSVDLGIGELGARGYVLETFEGHFLLPEMGPIGSNGLANPRDFESPVAWYEDRDVPYTVLTKFGGKLFSSAIDHSPFDVVAWHGNMTPYKYDLRKFICINSVSKDHPDPSIYTILTCPSAATPGVAVADFVVFPPRWMLAEGTFRPRWYHRNTMTEFTGMVWGKYDAKQ-GFLPGGSSLHPSMSAHGPDAATFIGASDEKVRYPVILYARSHGLAFMFETKYQLKLTVSVTEGKHRDREYLECWRHLPKNFTPDAK 1314
            + Y  GFGNHF++E L GA P G NNP +  Y LYAEQLSGTAFT PR  N+R W YRI P V H  ++ + A    NDF +    P Q+RW P+ +P   +K+  +FI+G+ TM G G P  K+GL I++YA N+ M D AFYN+DG+ L+VPQ G+L++ TE G L V P EI+ + RG++FS+DL   +  +RGYVLE +  HF+LP++GPIG+NGLANPRDFE PVAWYEDRDV +TV+ KFGGKLFS+ ++HSPFDVVAWHGN  PYKY+L  F  INSV+ DHPDPSIYT+LTC +    G AVADFV+FPPRWM+ E TFRP +YHRN MTEF GMV+G YDAK+ GF+PGG+SLH   SAHGPDA+TF  AS+  ++          GLAFMFE+ Y +KLT         +++Y +CW+ L K F P+ K
Sbjct:   24 LEYLPGFGNHFASEVLKGALPTGMNNPQKCNYGLYAEQLSGTAFTLPRKSNQRSWLYRILPPVVHDQYKEIPAKHIVNDFANQHITPQQLRWQPMALPKASEKV--NFIQGLHTMGGAGEPTMKAGLAIHMYAANASMKDTAFYNSDGDFLIVPQVGALKITTEFGKLHVKPREIVVIQRGIRFSIDL---DEPSRGYVLEVYNRHFILPDLGPIGANGLANPRDFEHPVAWYEDRDVDFTVIGKFGGKLFSAHMNHSPFDVVAWHGNYVPYKYNLDLFCTINSVNYDHPDPSIYTVLTCQTDEA-GCAVADFVIFPPRWMVQEKTFRPPYYHRNCMTEFMGMVYGVYDAKKDGFVPGGASLHSCDSAHGPDASTFESASNADLKPQYF----DGGLAFMFESSYLIKLTDYALHCPQNEKDYYKCWQPLKKLFNPNQK 452          
BLAST of mRNA_Ecto-sp13_S_contig128.2313.1 vs. uniprot
Match: A0A6G0X449_9STRA (Homogentisate 1,2-dioxygenase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X449_9STRA)

HSP 1 Score: 498 bits (1282), Expect = 7.380e-172
Identity = 244/439 (55.58%), Postives = 309/439 (70.39%), Query Frame = 1
Query:    1 VSYNSGFGNHFSTEALPGAPPAGQNNPTRYPYDLYAEQLSGTAFTAPRARNRRIWCYRIRPSVSHRPFQSVAANPFENDFTSMKNVPSQMRWLPLPIPSRQQKLRMDFIEGISTMSGVGIPAAKSGLGIYLYAMNSDMGDKAFYNADGEMLLVPQQGSLRVKTEMGILLVVPNEILEMPRGVQFSVDLGIGELGARGYVLETFEGHFLLPEMGPIGSNGLANPRDFESPVAWYEDRDVPYTVLTKFGGKLFSSAIDHSPFDVVAWHGNMTPYKYDLRKFICINSVSKDHPDPSIYTILTCPSAATPGVAVADFVVFPPRWMLAEGTFRPRWYHRNTMTEFTGMVWGKYDAKQ-GFLPGGSSLHPSMSAHGPDAATFIGASDEKVRYPVILYARSHGLAFMFETKYQLKLTVSVTEGKHRDREYLECWRHLPKNFTPDAK 1314
            + Y  GFGNHF++E L GA P G NNP +  Y LYAEQLSGTAFT PR  N+R W YRI P V H  ++ VA +   NDF+     P Q RW P+  P    ++  DFI+G+ TM G G P  K+G+ I++Y+ N+ M DKA YN+DG+ L+VPQ G+L++ TE G L V P EI+ +PRG++FS+DL   E  +RGYVLE +  HF+LP++GPIG+NGLANPRDFE PVAWYEDRD  +TV+ KFGGKLFS+ ++HSPF+VVAWHGN  PYKY+L  F  +NSV+ DHPDPSIYT+LTC     PG AVADFV+FPPRWM+ E TFRP +YHRN M+EF GMV+G YDAK+ GF+PGG+SLH   SAHGPDAATF  AS+  ++        S GLAFMFE+ Y +KLT         +++Y +CW+ L K F P  K
Sbjct:   14 LKYLPGFGNHFASEVLEGALPHGMNNPQKCNYGLYAEQLSGTAFTLPRHSNQRSWLYRILPPVLHGLYEEVAHDHIVNDFSDQHITPQQFRWQPMAFPESSDEV--DFIQGLRTMGGAGEPTMKAGMAIHMYSANASMTDKAIYNSDGDFLIVPQVGALKITTEFGKLYVAPREIVVIPRGIRFSIDL---EEPSRGYVLEVYNRHFVLPDLGPIGANGLANPRDFEHPVAWYEDRDCDFTVIGKFGGKLFSAHMNHSPFNVVAWHGNYLPYKYNLDLFCTMNSVNYDHPDPSIYTVLTC-QTDEPGCAVADFVIFPPRWMVQEKTFRPPYYHRNCMSEFMGMVYGVYDAKKDGFVPGGASLHSCDSAHGPDAATFDAASNADLKPHYF----SGGLAFMFESSYMIKLTDYALNCPQNEKDYYKCWQPLKKFFNPHQK 442          
BLAST of mRNA_Ecto-sp13_S_contig128.2313.1 vs. uniprot
Match: A0A485LPV9_9STRA (Homogentisate 1,2-dioxygenase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LPV9_9STRA)

HSP 1 Score: 495 bits (1275), Expect = 1.250e-170
Identity = 244/439 (55.58%), Postives = 309/439 (70.39%), Query Frame = 1
Query:    1 VSYNSGFGNHFSTEALPGAPPAGQNNPTRYPYDLYAEQLSGTAFTAPRARNRRIWCYRIRPSVSHRPFQSVAANPFENDFTSMKNVPSQMRWLPLPIPSRQQKLRMDFIEGISTMSGVGIPAAKSGLGIYLYAMNSDMGDKAFYNADGEMLLVPQQGSLRVKTEMGILLVVPNEILEMPRGVQFSVDLGIGELGARGYVLETFEGHFLLPEMGPIGSNGLANPRDFESPVAWYEDRDVPYTVLTKFGGKLFSSAIDHSPFDVVAWHGNMTPYKYDLRKFICINSVSKDHPDPSIYTILTCPSAATPGVAVADFVVFPPRWMLAEGTFRPRWYHRNTMTEFTGMVWGKYDAKQ-GFLPGGSSLHPSMSAHGPDAATFIGASDEKVRYPVILYARSHGLAFMFETKYQLKLTVSVTEGKHRDREYLECWRHLPKNFTPDAK 1314
            + Y  GFGNHF++E L GA P G NNP +  Y LYAEQLSGTAFT PR  N+R W YRI P V H  ++ V A    NDF +    P Q+RW P+  P       +DF+EG+ TM G G P  K+G+ I++YA N+ M DKAFYN+DG++L+VPQ G+L++ TE G LLV P EI+ + RG++F V+L   +  +RGYVLE +  HF+LP++GPIG+NGLANPRDFE PVAWYEDRDV +TV+ KFGGKLFS+ + HSPFDVVAWHGN  PYKY+L  F  +NSV+ DHPDPSIYT+LTC +    G AVADFV+FPPRWM+ E TFRP +YHRN MTEF GM++G YDAK+ GF+PGG+SLH   SAHGPDAATF  AS+  +      +    GLAFMFE+ Y +KLT    +    +++Y +CW+ L K F P  K
Sbjct:   25 LEYLPGFGNHFASEVLKGALPHGMNNPQKCNYGLYAEQLSGTAFTLPRHSNQRSWLYRILPPVVHDQYKEVPAKHIVNDFANQHITPQQLRWQPMAFPKTTD--HVDFVEGLHTMGGAGEPTMKAGMAIHMYAANTSMKDKAFYNSDGDLLIVPQVGALKITTEFGKLLVSPREIVVIQRGIRFFVEL---DEPSRGYVLEVYNRHFVLPDLGPIGANGLANPRDFEHPVAWYEDRDVDFTVVGKFGGKLFSAHMAHSPFDVVAWHGNYVPYKYNLDHFCTMNSVNYDHPDPSIYTVLTCQTDEA-GCAVADFVIFPPRWMVQEKTFRPPYYHRNCMTEFMGMIYGTYDAKKDGFVPGGASLHSCDSAHGPDAATFEAASNADLAP----HKFDGGLAFMFESSYIVKLTDYALKCPQNEKDYYKCWQPLKKFFNPKQK 453          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig128.2313.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZM7_ECTSI9.170e-28990.00Homogentisate 1,2-dioxygenase n=1 Tax=Ectocarpus s... [more]
A0A6H5JH36_9PHAE1.130e-21472.87Homogentisate 1,2-dioxygenase n=1 Tax=Ectocarpus s... [more]
A0A7S2S237_9STRA1.300e-17860.37Homogentisate 1,2-dioxygenase n=1 Tax=Rhizochromul... [more]
A0A485KU48_9STRA7.790e-17656.29Homogentisate 1,2-dioxygenase n=1 Tax=Aphanomyces ... [more]
A0A067CLV5_SAPPC4.330e-17556.14Homogentisate 1,2-dioxygenase n=2 Tax=Saprolegnia ... [more]
A0A1V9ZCB2_9STRA4.190e-17455.35Homogentisate 1,2-dioxygenase n=1 Tax=Thraustothec... [more]
A0A067D521_SAPPC5.350e-17455.35Homogentisate 1,2-dioxygenase n=3 Tax=Saprolegniac... [more]
A0A024UNF4_9STRA2.580e-17255.58Homogentisate 1,2-dioxygenase n=5 Tax=Aphanomyces ... [more]
A0A6G0X449_9STRA7.380e-17255.58Homogentisate 1,2-dioxygenase n=1 Tax=Aphanomyces ... [more]
A0A485LPV9_9STRA1.250e-17055.58Homogentisate 1,2-dioxygenase n=1 Tax=Aphanomyces ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig128contigEcto-sp13_S_contig128:28764..30228 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score803.1
Seed ortholog evalue6.3e-230
Seed eggNOG ortholog2880.D7FZM7
Preferred nameHGD
Model size1317
KEGG rclassRC00737
KEGG koko:K00451
KEGG ReactionR02519
KEGG Pathwayko00350,ko00643,ko01100,ko01120,map00350,map00643,map01100,map01120
KEGG ModuleM00044
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004411,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006558,GO:0006559,GO:0006570,GO:0006572,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009987,GO:0016054,GO:0016491,GO:0016701,GO:0016702,GO:0017144,GO:0018958,GO:0019336,GO:0019439,GO:0019752,GO:0032787,GO:0042737,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0051213,GO:0055114,GO:0071704,GO:0072329,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606,GO:1901615,GO:1901616,GO:1901999,GO:1902000,GO:1902221,GO:1902222
Exons2
EggNOG free text desc.homogentisate 1,2-dioxygenase activity
EggNOG OGsCOG3508@1,KOG1417@2759
EC1.13.11.5
Cds size1317
COG Functional cat.Q
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462684.826619-CDS-Ecto-sp13_S_contig128:28763..299451681462684.826619-CDS-Ecto-sp13_S_contig128:28763..29945Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig128 28764..29945 +
1681462684.8392868-CDS-Ecto-sp13_S_contig128:30093..302281681462684.8392868-CDS-Ecto-sp13_S_contig128:30093..30228Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig128 30094..30228 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig128.2313.1prot_Ecto-sp13_S_contig128.2313.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig128 28764..30228 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig128.2313.1

>prot_Ecto-sp13_S_contig128.2313.1 ID=prot_Ecto-sp13_S_contig128.2313.1|Name=mRNA_Ecto-sp13_S_contig128.2313.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=439bp
VSYNSGFGNHFSTEALPGAPPAGQNNPTRYPYDLYAEQLSGTAFTAPRAR
NRRIWCYRIRPSVSHRPFQSVAANPFENDFTSMKNVPSQMRWLPLPIPSR
QQKLRMDFIEGISTMSGVGIPAAKSGLGIYLYAMNSDMGDKAFYNADGEM
LLVPQQGSLRVKTEMGILLVVPNEILEMPRGVQFSVDLGIGELGARGYVL
ETFEGHFLLPEMGPIGSNGLANPRDFESPVAWYEDRDVPYTVLTKFGGKL
FSSAIDHSPFDVVAWHGNMTPYKYDLRKFICINSVSKDHPDPSIYTILTC
PSAATPGVAVADFVVFPPRWMLAEGTFRPRWYHRNTMTEFTGMVWGKYDA
KQGFLPGGSSLHPSMSAHGPDAATFIGASDEKVRYPVILYARSHGLAFMF
ETKYQLKLTVSVTEGKHRDREYLECWRHLPKNFTPDAK*
back to top

mRNA from alignment at Ecto-sp13_S_contig128:28764..30228+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig128.2313.1 ID=mRNA_Ecto-sp13_S_contig128.2313.1|Name=mRNA_Ecto-sp13_S_contig128.2313.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1465bp|location=Sequence derived from alignment at Ecto-sp13_S_contig128:28764..30228+ (Ectocarpus species13 EcNAP12_S_4_19m)
GTTTCGTACAACAGTGGTTTCGGCAATCACTTTTCGACGGAGGCGCTCCC GGGTGCACCGCCTGCAGGGCAGAACAACCCCACGAGATACCCTTACGACC TGTACGCGGAGCAACTATCAGGTACAGCCTTCACGGCGCCTCGTGCGAGA AACAGGAGAATATGGTGCTACAGGATCCGCCCCTCCGTTTCACACCGACC CTTCCAGTCCGTCGCTGCGAACCCGTTCGAGAATGATTTCACTTCAATGA AAAACGTCCCGTCGCAGATGCGTTGGTTACCACTCCCCATTCCTTCGAGG CAACAAAAACTGCGGATGGACTTCATTGAGGGCATTTCAACCATGAGCGG GGTGGGTATCCCGGCGGCAAAGAGCGGGCTCGGGATCTACCTGTACGCGA TGAACTCTGACATGGGCGACAAAGCGTTCTACAATGCGGACGGGGAGATG CTCCTGGTGCCTCAGCAAGGATCTCTCCGTGTGAAAACAGAGATGGGCAT CCTGCTGGTAGTCCCCAATGAAATTTTGGAGATGCCCCGCGGTGTGCAAT TTAGTGTGGATCTCGGGATTGGCGAGTTGGGCGCACGAGGCTACGTGCTG GAGACTTTCGAAGGGCACTTCCTGTTGCCTGAAATGGGACCCATCGGCTC CAATGGGTTGGCCAACCCACGCGACTTTGAATCACCGGTGGCATGGTATG AGGACCGGGACGTACCATATACGGTCCTGACGAAGTTTGGCGGGAAACTC TTCTCTTCTGCCATAGACCATTCCCCGTTCGACGTGGTGGCCTGGCATGG CAACATGACGCCTTACAAGTACGACCTGCGGAAGTTCATCTGCATCAACT CCGTGTCAAAGGACCACCCGGACCCGTCCATCTACACCATTCTGACGTGC CCGTCCGCGGCAACCCCCGGCGTGGCCGTCGCCGACTTCGTCGTGTTCCC GCCACGCTGGATGTTGGCGGAAGGCACCTTTCGGCCACGGTGGTATCACC GGAACACCATGACGGAGTTCACGGGCATGGTATGGGGGAAGTATGACGCG AAACAAGGTTTCTTGCCGGGGGGCTCTAGCCTGCACCCCAGCATGAGCGC GCATGGACCTGACGCCGCAACTTTTATCGGGGCGTCGGACGAAAAGGTAC GATATCCCGTTATACTTTATGCTAGAAGTCATGTTCGCTGCACGTAACGC AAGTATCATTCTCGCCTTCCGACAAGGCGATCCCCATCTTTACAACAGCG GGCAGTGATCGATGATTTCAAAGAGCTGCATGTGAATCGCCTGAATGGAA CAGGCGCCTCTTCCTGTGAAGTATGACAAGGGACTCGCGTTTATGTTCGA GACGAAGTACCAGCTGAAGCTGACAGTGTCCGTGACGGAGGGGAAACACC GCGACCGGGAATACCTTGAATGCTGGCGTCACTTGCCCAAGAACTTCACC CCAGATGCCAAGTGA
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig128:28764..30228+

>mRNA_Ecto-sp13_S_contig128.2313.1 ID=mRNA_Ecto-sp13_S_contig128.2313.1|Name=mRNA_Ecto-sp13_S_contig128.2313.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1317bp|location=Sequence derived from alignment at Ecto-sp13_S_contig128:28764..30228+ (Ectocarpus species13 EcNAP12_S_4_19m)
GTTTCGTACAACAGTGGTTTCGGCAATCACTTTTCGACGGAGGCGCTCCC
GGGTGCACCGCCTGCAGGGCAGAACAACCCCACGAGATACCCTTACGACC
TGTACGCGGAGCAACTATCAGGTACAGCCTTCACGGCGCCTCGTGCGAGA
AACAGGAGAATATGGTGCTACAGGATCCGCCCCTCCGTTTCACACCGACC
CTTCCAGTCCGTCGCTGCGAACCCGTTCGAGAATGATTTCACTTCAATGA
AAAACGTCCCGTCGCAGATGCGTTGGTTACCACTCCCCATTCCTTCGAGG
CAACAAAAACTGCGGATGGACTTCATTGAGGGCATTTCAACCATGAGCGG
GGTGGGTATCCCGGCGGCAAAGAGCGGGCTCGGGATCTACCTGTACGCGA
TGAACTCTGACATGGGCGACAAAGCGTTCTACAATGCGGACGGGGAGATG
CTCCTGGTGCCTCAGCAAGGATCTCTCCGTGTGAAAACAGAGATGGGCAT
CCTGCTGGTAGTCCCCAATGAAATTTTGGAGATGCCCCGCGGTGTGCAAT
TTAGTGTGGATCTCGGGATTGGCGAGTTGGGCGCACGAGGCTACGTGCTG
GAGACTTTCGAAGGGCACTTCCTGTTGCCTGAAATGGGACCCATCGGCTC
CAATGGGTTGGCCAACCCACGCGACTTTGAATCACCGGTGGCATGGTATG
AGGACCGGGACGTACCATATACGGTCCTGACGAAGTTTGGCGGGAAACTC
TTCTCTTCTGCCATAGACCATTCCCCGTTCGACGTGGTGGCCTGGCATGG
CAACATGACGCCTTACAAGTACGACCTGCGGAAGTTCATCTGCATCAACT
CCGTGTCAAAGGACCACCCGGACCCGTCCATCTACACCATTCTGACGTGC
CCGTCCGCGGCAACCCCCGGCGTGGCCGTCGCCGACTTCGTCGTGTTCCC
GCCACGCTGGATGTTGGCGGAAGGCACCTTTCGGCCACGGTGGTATCACC
GGAACACCATGACGGAGTTCACGGGCATGGTATGGGGGAAGTATGACGCG
AAACAAGGTTTCTTGCCGGGGGGCTCTAGCCTGCACCCCAGCATGAGCGC
GCATGGACCTGACGCCGCAACTTTTATCGGGGCGTCGGACGAAAAGGTAC
GATATCCCGTTATACTTTATGCTAGAAGTCATGGACTCGCGTTTATGTTC
GAGACGAAGTACCAGCTGAAGCTGACAGTGTCCGTGACGGAGGGGAAACA
CCGCGACCGGGAATACCTTGAATGCTGGCGTCACTTGCCCAAGAACTTCA
CCCCAGATGCCAAGTGA
back to top