prot_Ecto-sp13_S_contig12795.2310.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12795.2310.1
Unique Nameprot_Ecto-sp13_S_contig12795.2310.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length1216
Homology
BLAST of mRNA_Ecto-sp13_S_contig12795.2310.1 vs. uniprot
Match: A0A6H5J8H1_9PHAE (Structure-specific endonuclease subunit SLX4 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8H1_9PHAE)

HSP 1 Score: 1033 bits (2672), Expect = 0.000e+0
Identity = 807/1140 (70.79%), Postives = 825/1140 (72.37%), Query Frame = 0
Query:    1 RLAAHRTFGARLSAGAGGVPSESGGGDGGGAPKTAEEVVDIIFADEHGVAAAA-GIGGDAGTPLPVSTSLLSEGGRSQQRGAGLPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGTPAPXXXXXXXXXXXXXXXXXXXXXXXFVAGARGTPLSGDKPRYDDDKGCWGDDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRARRGRTLWAIAQGAGELSQSHFVTGVFADFRANSTGGVRGGAGGKPHAAKPRRRAAVTAAAYGDARLYNRRVGSSAAASPSALSSTLCSDQGDIDAATRSAVAADTDEGMGGGLPGKSGREQSASQLNPSDENGXXXXXX--AIDDAIQLLSQTLSQASVS-LGXXXXXXXXXXXXXXXXXXXXXXXXVERFAARHIARAPVSSLSGLFPNWKENVVFVFRQGAAELHEALQGIVAALSEXXXXXXXXXXXXXXXRGGEGAGTEGCPSGVRTRSRKAEALMFFEGIILEALEARGPACSRQSASLGE-----DGSRSPGFEVGSPQTRRRGSEGVGSGRNGGGAATPGSDSPPRDGASSVQDKGFAFEEQEESRRTRDDVGGSEGGEGQAXXXXESGDHLSVADEATGLEETHAATAEN-GNDAELAAGGADDGDAGTRSGGHPHHGDSSVEAIVLSGDSTASAVVTFDLTSSEASKRCSTAGDTATAAXXXXGGVA----VAGLAELPVGADGSSRNSGRGVTARVRNGQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSHRGVTASGRNGXXXXXXXXXXXXXXXXXXXXXXXXGANGSGSADERGEVNGDGDDVVDEYALEDEYGFDDHDYCAWGDENDLSFVPSPDIDGVADERQPPPXXXXXSPPLSPTQRXXDIDXXAAP--AADKASHDSTSAMGAELLDLTQVAPLPSPSPRRCRESPDAAATTSPIGRGRSQHRGLGSPTASRRGHXXXXXXXXXXXXXXXXXXXXXXXNGEDAEPREVMPSFGQMTLQELAGMMAVYGLKKKSKREMTERLEHIWNTLHPAAANGGMSAAGDGTXXXXXXXXXXXXXXK-RDAPSRDSSDGPSSCLSASPEGRRRSRAAAEARPTFS 1123
            +LAAHRT GARLSAGAGGVPSES G    GAPKTAEEVVDIIFADEHG AAAA GIG  A TPL VSTS LSE GR+QQRGA L S                                                     +GTPAP          XXXXXXXXXXXXXFVAGARGTP SGD PRYD DKGCWGDD XXXXXXXXX                           SRARRGRTLWAIAQGA ELSQS FVTGVFAD RANSTGGV GGAGGKPHAAKP RRAAVTAAAYGDARLYNRRV SSAAASPSALSSTLCSDQGD            TDEGMGGG PGKS REQSASQLNPSDENG   X    A+DD IQLLSQTLSQASVS   XXXXXXXXXXXXXXXXXXXXXXXX ERFAARHIARAPVSSLSGLFPNWKENV FVFRQGAAEL EALQGIV ALSE                                  ++AEAL+FFEG+ILEALEARGPACSRQ A LGE     DGS SPGFEVGSPQT RRGSEGVG GRNGGGA TPGSDSPPR GA+SVQD GFA E  EE    R D GGSE GEGQA    ESGDHLSVADEATGLEETHA TAEN G+DAE AA G DDGDAGT+S GHPHHGDSSVEAIVLSGDSTASAVVTFDLTSSE+SKRCS+AGD     XXXX         AGLAE PVGADG  RNSGRGVTAR RNGQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      KSHRGVTAS RN    XXXXXX XXXXXXXXXXXXXXGANG  S DERGE +GD DDVVDEYALEDEYGFDDHDYCAWGDENDLSFVPSPDIDGVADERQP  XXXXX         XX   XX     AADK SHDSTSAMGAELLDLTQVAPLPSPS RRCRES DAAA TSPIGRGRSQHRGL SP  +RR H                       N + AE REVMPSFGQMTLQELAGMMAVYGLKKKSKREMTERLEHIW TLHPAAA  GMSAAGDG  XXXXXXXXXXXXX  RDAPSRDS   PS+ LSAS +G RRSR AAEARPT S
Sbjct:  382 KLAAHRTLGARLSAGAGGVPSESSGXXXXGAPKTAEEVVDIIFADEHGAAAAAAGIGSGARTPLRVSTSRLSEEGRAQQRGATLLSSSPSSSSPVSLLSKGTAVADAAGGGSDAASGERPTTVPRRSRRERA-------KGTPAPLPAPEEDGASXXXXXXXXXXXXXFVAGARGTPPSGDNPRYDGDKGCWGDD-XXXXXXXXXGVGRLIRRRSGGGANGNGQRSTPGGDGSRARRGRTLWAIAQGADELSQSDFVTGVFADIRANSTGGVGGGAGGKPHAAKPGRRAAVTAAAYGDARLYNRRVVSSAAASPSALSSTLCSDQGD------------TDEGMGGGRPGKSEREQSASQLNPSDENGGSGXDGDDAVDDVIQLLSQTLSQASVSGXXXXXXXXXXXXXXXXXXXXXXXXXXAERFAARHIARAPVSSLSGLFPNWKENVGFVFRQGAAELQEALQGIVTALSEE-------------------------------EEKEAEALVFFEGVILEALEARGPACSRQLAFLGEERRRDDGSHSPGFEVGSPQTWRRGSEGVGIGRNGGGAVTPGSDSPPRGGANSVQDSGFALEGPEERGSERYDGGGSENGEGQARVDGESGDHLSVADEATGLEETHATTAENNGHDAEPAAVGTDDGDAGTQSVGHPHHGDSSVEAIVLSGDSTASAVVTFDLTSSESSKRCSSAGDIXXXXXXXXXXXXXXXXAAGLAEFPVGADGGGRNSGRGVTARARNGQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRR---KSHRGVTASVRNCQRKXXXXXXVXXXXXXXXXXXXXXGANGPDSTDERGEASGDSDDVVDEYALEDEYGFDDHDYCAWGDENDLSFVPSPDIDGVADERQPXXXXXXXXXXXXXXXXXXXXXXXXXXXAAADKVSHDSTSAMGAELLDLTQVAPLPSPSLRRCRESLDAAAATSPIGRGRSQHRGLESPATARRRHHCTPSSPPVEGEEGASSPTAVGGNEDIAELREVMPSFGQMTLQELAGMMAVYGLKKKSKREMTERLEHIWKTLHPAAAEEGMSAAGDGNAXXXXXXXXXXXXXXXRDAPSRDSGGDPSAYLSASSQGHRRSRGAAEARPTSS 1467          
BLAST of mRNA_Ecto-sp13_S_contig12795.2310.1 vs. uniprot
Match: D8LCH0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCH0_ECTSI)

HSP 1 Score: 868 bits (2242), Expect = 3.080e-295
Identity = 644/829 (77.68%), Postives = 668/829 (80.58%), Query Frame = 0
Query:  232 SRARRGRTLWAIAQGAGELSQSHFVTGVFADFRANSTGGVRGGAGGKPHAAKPRRRAAVTAAAYGDARLYNRRVGSSAAASPSALSSTLCSDQGDIDAATRSAVAADTDEGMGGGLPGKSGREQSASQLNPSDENGXXXXXX--AIDDAIQLLSQTLSQASVSLGXXXXXXXXXXXXXXXXXXXXXXXXVERFAARHIARAPVSSLSGLFPNWKENVVFVFRQGAAELHEALQGIVAALSEXXXXXXXXXXXXXXXRGGEGAGTEGCPSGVRTRSRKAEALMFFEGIILEALEARGPACSRQSASLGE-----DGSRSPGFEVGSPQTRRRGSEGVGSGRNGGGAATPGSDSPPRDGASSVQDKGFAFEEQEESRRTRDD-VGGSEGGEGQAXXXXESGDHLSVADEATGLEETHAATAEN-GNDAELAAGGADDGDAGTRSGGHPHHGDSSVEAIVLSGDSTASAVVTFDLTSSEASKRCSTAGDTATAAXXXXGGVAVAGLAELPVGADGSSRNSGRGVTARVRNGQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------KSHRGVTASGRNGXXXXXXXXXXXXXXXXXXXXXXXXGANGSGSADERGEVNGDGDDVVDEYALEDEYGFDDHDYCAWGDENDLSFVPSPDIDGVADERQPPPXXXXXSPPLSPTQRXXDIDXXAAPAADKASHDSTSAMGAELLDLTQVAPLPSPSPRRCRESPDAAATTSPIGRGRSQHRGLGSPTASRRGHXXXXXXXXXXXXXXXXXXXXXXXN-GEDAEPREVMPSFGQMTLQELAGMMAVYGLKKKSKR 1042
            SR RRGRTLWAIAQGA ELSQS+FVTGVFAD +ANS G V GGAGGKP AAKP RRAAVTAAAYGDARLYNRRVGSSAAAS SALSSTLCS++G IDAATRSA AADTD+GMGGG PGKS REQS SQLNPSDENG        A+DDAIQLLSQTLSQASVS                           ER AARHIARAPVS+LSGLFPNWKENV+FVFRQGAAEL  ALQGIVAALSEXXXXXXXXXXXXXXX     AG EG PSGVR RSRKAEAL+FFEG++LEALE RGPACSR+SASLGE     DGSRSPGFE GS QT  RGSEGVG G   G AATPGSDSPPR GASSVQD  FA EEQEES R RDD  G SEGG GQA    E GDHLSVADEA G EETHAATAEN G+DAE AA GADDGDAG RS GHPHHGDSSVEAIVLSGDSTASAVVTFDLTSSEASKRCS+AGDTA  A    GGVA AG+AE PVGADGS RNSGRGVTAR++NGQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        KSHRGVT SGRN      XXXXXXXXXXX  XXXXX GANG GS DERGE +GDG D++D+YALEDEYGFDDH+YCAWGDENDLSFVPSPD DGVADERQP  XXXXX         XX   XX    ADKASHDSTSA+G ELLDLTQVAPLPSPSPRRCRE  DAAA TSPIGRGRSQHRGL SP A     XXXXXXXXXXXXXXXXXXXXXXX  G+DAE REVMPSFGQMTLQELAGMMAVYGLKKKSKR
Sbjct:  260 SRVRRGRTLWAIAQGADELSQSNFVTGVFADIKANSIGSVGGGAGGKPQAAKPGRRAAVTAAAYGDARLYNRRVGSSAAASASALSSTLCSNRGGIDAATRSADAADTDKGMGGGRPGKSEREQSVSQLNPSDENGGGGGDGNDAVDDAIQLLSQTLSQASVS---GRGGTASAQDGGQENSGKKQEEEAERSAARHIARAPVSALSGLFPNWKENVIFVFRQGAAELRLALQGIVAALSEXXXXXXXXXXXXXXXXXXXXAGPEGRPSGVRRRSRKAEALVFFEGVVLEALELRGPACSRRSASLGEESGREDGSRSPGFEAGSRQTLHRGSEGVGDGITSGDAATPGSDSPPRGGASSVQDNVFALEEQEESARKRDDGAGASEGGVGQAGGDGEDGDHLSVADEAMGFEETHAATAENDGHDAEPAAVGADDGDAGMRSVGHPHHGDSSVEAIVLSGDSTASAVVTFDLTSSEASKRCSSAGDTAATAAA--GGVAAAGIAEYPVGADGSGRNSGRGVTARIKNGQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSRKSHRGVTTSGRN---CQRXXXXXXXXXXXMTXXXXXDGANGPGSTDERGEASGDGSDIIDQYALEDEYGFDDHNYCAWGDENDLSFVPSPDSDGVADERQPXXXXXXXXXXXXXXXXXXXXXXXXXXXADKASHDSTSAVGDELLDLTQVAPLPSPSPRRCREPLDAAAATSPIGRGRSQHRGLESPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDDAELREVMPSFGQMTLQELAGMMAVYGLKKKSKR 1080          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12795.2310.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J8H1_9PHAE0.000e+070.79Structure-specific endonuclease subunit SLX4 n=1 T... [more]
D8LCH0_ECTSI3.080e-29577.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 454..474

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12795contigEcto-sp13_S_contig12795:131..4689 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12795.2310.1mRNA_Ecto-sp13_S_contig12795.2310.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12795 131..4689 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12795.2310.1 ID=prot_Ecto-sp13_S_contig12795.2310.1|Name=mRNA_Ecto-sp13_S_contig12795.2310.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1216bp
RLAAHRTFGARLSAGAGGVPSESGGGDGGGAPKTAEEVVDIIFADEHGVA
AAAGIGGDAGTPLPVSTSLLSEGGRSQQRGAGLPSSSSSSSSSSSPVSLL
SKGTAVAAAAAAAAAAGADAASGERPTTEPRRSRRERAEGTPAPLLAAEE
DGASDGAAGKGGGGGGGFVAGARGTPLSGDKPRYDDDKGCWGDDGDDDED
DDTGVGRLIRRRSSGGANDNGQRSTTPGGGGSRARRGRTLWAIAQGAGEL
SQSHFVTGVFADFRANSTGGVRGGAGGKPHAAKPRRRAAVTAAAYGDARL
YNRRVGSSAAASPSALSSTLCSDQGDIDAATRSAVAADTDEGMGGGLPGK
SGREQSASQLNPSDENGGGGGDDAIDDAIQLLSQTLSQASVSLGGGGTAS
AQDGGQENGGKKQEEEEEVERFAARHIARAPVSSLSGLFPNWKENVVFVF
RQGAAELHEALQGIVAALSEEEEEKAATVAGGGGGRGGEGAGTEGCPSGV
RTRSRKAEALMFFEGIILEALEARGPACSRQSASLGEDGSRSPGFEVGSP
QTRRRGSEGVGSGRNGGGAATPGSDSPPRDGASSVQDKGFAFEEQEESRR
TRDDVGGSEGGEGQAGGDGESGDHLSVADEATGLEETHAATAENGNDAEL
AAGGADDGDAGTRSGGHPHHGDSSVEAIVLSGDSTASAVVTFDLTSSEAS
KRCSTAGDTATAAAAAAGGVAVAGLAELPVGADGSSRNSGRGVTARVRNG
QEEEEEEEEEEEEDYTFAIVDSGGGGGGRAKDTDSSSRKSHRGVTASGRN
GRRKEEEEEDDEFARMDSGGGGGGGGANGSGSADERGEVNGDGDDVVDEY
ALEDEYGFDDHDYCAWGDENDLSFVPSPDIDGVADERQPPPPPPPPSPPL
SPTQRPPDIDPPAAPAADKASHDSTSAMGAELLDLTQVAPLPSPSPRRCR
ESPDAAATTSPIGRGRSQHRGLGSPTASRRGHHRTSSSPPVDEEEGTPSS
SAGGGNGEDAEPREVMPSFGQMTLQELAGMMAVYGLKKKSKREMTERLEH
IWNTLHPAAANGGMSAAGDGTATASSSSSSSSRCRKRDAPSRDSSDGPSS
CLSASPEGRRRSRAAAEARPTFSPAAPAPAVTVASSTSIPRRPPLSRPPR
RGGVPGGGRSRRGRIPQEEEAVPPLLFTCGSQPPQQQQQEFLAESSSGGK
GGDADLGERIRGVIM*
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