prot_Ecto-sp13_S_contig12792.2308.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12792.2308.1
Unique Nameprot_Ecto-sp13_S_contig12792.2308.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length82
Homology
BLAST of mRNA_Ecto-sp13_S_contig12792.2308.1 vs. uniprot
Match: A0A6H5JZG3_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZG3_9PHAE)

HSP 1 Score: 102 bits (253), Expect = 1.970e-23
Identity = 47/60 (78.33%), Postives = 52/60 (86.67%), Query Frame = 0
Query:   24 IEGEMDPRPATR-MRKSCCACGRKKKKCDGFMPCRRCVDSGSRCVYEKRRCHLPLAHHEQ 82
            ++G M+P PAT  MR+SC  CGRKK+KCDG MPCRRCVDSGSRCVYEKRRCHLP AHHEQ
Sbjct:    1 MKGGMEPTPATLGMRRSCSECGRKKRKCDGLMPCRRCVDSGSRCVYEKRRCHLPRAHHEQ 60          
BLAST of mRNA_Ecto-sp13_S_contig12792.2308.1 vs. uniprot
Match: D8LU21_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU21_ECTSI)

HSP 1 Score: 68.9 bits (167), Expect = 8.530e-12
Identity = 29/41 (70.73%), Postives = 33/41 (80.49%), Query Frame = 0
Query:   36 MRKSCCACGRKKKKCDGFMPCRRCVDSGSRCVYEKRRCHLP 76
            MRKSCCACGRKK+KCDG MPC RC+ +G RC Y KR+ H P
Sbjct:   18 MRKSCCACGRKKRKCDGLMPCSRCLGAGVRCTYRKRKPHQP 58          
BLAST of mRNA_Ecto-sp13_S_contig12792.2308.1 vs. uniprot
Match: A0A6H5JBJ1_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBJ1_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 1.420e-10
Identity = 27/46 (58.70%), Postives = 33/46 (71.74%), Query Frame = 0
Query:   36 MRKSCCACGRKKKKCDGFMPCRRCVDSGSRCVYEKRRCHLPLAHHE 81
            MR+SCC CGRKK+KCDG  PC RC+ SG +C Y KR+ H P   H+
Sbjct:   18 MRRSCCECGRKKRKCDGMAPCSRCLRSGVQCTYSKRKPHQPQTQHQ 63          
BLAST of mRNA_Ecto-sp13_S_contig12792.2308.1 vs. uniprot
Match: A0A6H5K8E7_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8E7_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 4.970e-10
Identity = 28/41 (68.29%), Postives = 32/41 (78.05%), Query Frame = 0
Query:   36 MRKSCCACGRKKKKCDGFMPCRRCVDSGSRCVYEKRRCHLP 76
            MRKSC ACGRKK+KCDG MPC RC+ +G RC Y KR+ H P
Sbjct:   18 MRKSCGACGRKKRKCDGLMPCSRCLRAGVRCTYSKRKPHQP 58          
BLAST of mRNA_Ecto-sp13_S_contig12792.2308.1 vs. uniprot
Match: A0A6H5JYW4_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYW4_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 6.770e-10
Identity = 29/47 (61.70%), Postives = 33/47 (70.21%), Query Frame = 0
Query:   36 MRKSCCACGRKKKKCDGFMPCRRCVDSGSRCVYEKRRCHLPLAHHEQ 82
            MR+SC  CGRKKK+CDG  PCRRCV SG +C Y  RR HL   H +Q
Sbjct:   29 MRRSCTECGRKKKRCDGQQPCRRCVGSGGQCAYIMRRWHLLKPHQQQ 75          
BLAST of mRNA_Ecto-sp13_S_contig12792.2308.1 vs. uniprot
Match: D8LU16_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU16_ECTSI)

HSP 1 Score: 60.8 bits (146), Expect = 5.970e-9
Identity = 28/44 (63.64%), Postives = 32/44 (72.73%), Query Frame = 0
Query:   36 MRKSCCACGRKKKKCDGFMPCRRCVDSGSRCVYEKRRCHLPLAH 79
            +R+SC  CGRKKK+CDG  PCRRCV SGS+C Y KRR  L   H
Sbjct:   28 IRRSCSECGRKKKRCDGQRPCRRCVRSGSQCTYSKRRRRLLQTH 71          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12792.2308.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5JZG3_9PHAE1.970e-2378.33Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D8LU21_ECTSI8.530e-1270.73Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A6H5JBJ1_9PHAE1.420e-1058.70Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A6H5K8E7_9PHAE4.970e-1068.29Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A6H5JYW4_9PHAE6.770e-1061.70Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D8LU16_ECTSI5.970e-963.64Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilyGENE3D4.10.240.10coord: 32..81
e-value: 2.4E-6
score: 29.4
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilySUPERFAMILY57701Zn2/Cys6 DNA-binding domaincoord: 30..72
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS50048ZN2_CY6_FUNGAL_2coord: 39..68
score: 9.666

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12792contigEcto-sp13_S_contig12792:3284..3843 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12792.2308.1mRNA_Ecto-sp13_S_contig12792.2308.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12792 3282..3843 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12792.2308.1 ID=prot_Ecto-sp13_S_contig12792.2308.1|Name=mRNA_Ecto-sp13_S_contig12792.2308.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=82bp
VLKHGGIYERAEHHAEAARPYWVIEGEMDPRPATRMRKSCCACGRKKKKC
DGFMPCRRCVDSGSRCVYEKRRCHLPLAHHEQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036864Zn2-C6_fun-type_DNA-bd_sf
IPR001138Zn2-C6_fun-type_DNA-bd