mRNA_Ecto-sp13_S_contig12783.2302.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig12783.2302.1 vs. uniprot
Match: D7FVB5_ECTSI (Protein phosphatase type 2A regulator/ signal transducer n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVB5_ECTSI) HSP 1 Score: 1310 bits (3391), Expect = 0.000e+0 Identity = 694/742 (93.53%), Postives = 709/742 (95.55%), Query Frame = 2
Query: 215 MPPLPAKKSPGTSDAASSNLAKQPPALSPRAVSSLKPDTDDGATFESFLSYKPSQGEDTLAVYEAVNDPSKWLLKNKETGQEVEATAFADTLLARRPAPQWATVSPRLGSHSQGSRGWPRLQRQKAPAFQRPTLLPPSNGDIAFFPPASAGPLTPPFLQLGFSSLSGRSSPLRFGARSPVSGQSFSRPRSGSNSHGRSNSDSTASSAILSVDASPSFKLRNMSTTQLLPRLHHGGVRAMSFSPSGAFLATCGMDRRCCVFRVQRRRQTTALRAGSPNAAAAAVSLSVDRGMSRQPNSDSVEGRLIDDQPLRVLTGHVDSVVALAWAGGDNALLTGSSDGTVRCWHPLEGNECSEVYEHGGGVTSVAWEPGGEARGGRFLTGCMDARIRLFSLHSPEVEQSVLSERAVTAVAFCPGGQRFAAGGIAGNVEFYRMDNMSLELTVECRRHGFRHSAAQRTRLATSPVRRLSVGTGDGRSNGAGGDRVXXXXXXXXXXXXXXXXXXXXXNTLGSRAGARVPGTVEERVTGLCFRPPTKGPAEQAGDCSDSDGEEHRLSGASRSTGGKMGEYSQEVAPSPRVGGEIVAPQADEKDANRSGNLWVERLEADLLVSTNDNRLRILVSGERGVTVGFKLKGHSTEGELGRHTAARYSDDGNFIVSGATDGSVHVWSTPTTPPGTKSVTWSSGREGHERAQVCDKRVGVPVAFFAPASVAKNLGGTSSRVIVTGDNEGNCKIFCERLANRE 2440
MPPLPAKKSPGTSDAA+SNLAKQPPA SPRAVSSLKPDT DGATFES+LSYKPS GEDTLAVYEAV+DPSKWLLKNKETGQEVEATAFADTLLARRPAPQWATVSPRLGSHS GSRGWPRLQR KAPAFQRPTLLPPSNGD+A+FP A AGPLTPP LQLGFSSLSGR+SPLRFGARSPVSGQSFSRPR GSNSHGRSNSDST SS ILSVDA P+FKLRNMSTTQLLPRLH GGVRAMSFSPSGAFLATCGMDRRCCVFRVQ+RRQT AL GSPNAAA AV L VDRGMSRQP+S VEGRL+DDQPLRVLTGHVDSVVALAWAGGDNALLTGSSDGTVRCWHPLEGNECSEVYEHGGGVTSVAWEPGGEA GGRFLTGCMDARIRLFSL SPEVEQSVLSERAVTAVAFCPGGQ FAAGGIAGNVEFYRM+NMSLELTVECRRHGFRHSAAQRTRLATSPVRRLSVGTGDGRSNGAGGDRVXXXXXXXXXXXXXXXXXXXXXNTLGSRAGARVPGTVEERVTGLCFRPPTKGPAE AGDCSDSDGEEHRLSGASRSTGGKMGE SQEVAPSPR GGE+VAPQADEKDAN SGNLWVERLEADLLVSTNDNR RILVSGERGVTVGFKLKGHSTEGELGRHTAARYSDDGN IVSGATDGSVHVW TPTTPPGTKSVTWSSGREGHERA+VCDKRVGVPVAFFAPASVAKNLGGTSSRVIVTGDNEGNCKIFCE+ A+ E
Sbjct: 1 MPPLPAKKSPGTSDAAASNLAKQPPAESPRAVSSLKPDTSDGATFESYLSYKPSHGEDTLAVYEAVSDPSKWLLKNKETGQEVEATAFADTLLARRPAPQWATVSPRLGSHSHGSRGWPRLQRHKAPAFQRPTLLPPSNGDVAYFPLAPAGPLTPPSLQLGFSSLSGRASPLRFGARSPVSGQSFSRPRCGSNSHGRSNSDSTTSSVILSVDAPPTFKLRNMSTTQLLPRLHPGGVRAMSFSPSGAFLATCGMDRRCCVFRVQKRRQTLALGEGSPNAAAVAVGLPVDRGMSRQPSSVCVEGRLVDDQPLRVLTGHVDSVVALAWAGGDNALLTGSSDGTVRCWHPLEGNECSEVYEHGGGVTSVAWEPGGEAHGGRFLTGCMDARIRLFSLDSPEVEQSVLSERAVTAVAFCPGGQSFAAGGIAGNVEFYRMENMSLELTVECRRHGFRHSAAQRTRLATSPVRRLSVGTGDGRSNGAGGDRVXXXXXXXXXXXXXXXXXXXXXNTLGSRAGARVPGTVEERVTGLCFRPPTKGPAELAGDCSDSDGEEHRLSGASRSTGGKMGENSQEVAPSPRAGGEVVAPQADEKDANGSGNLWVERLEADLLVSTNDNRSRILVSGERGVTVGFKLKGHSTEGELGRHTAARYSDDGNLIVSGATDGSVHVWPTPTTPPGTKSVTWSSGREGHERARVCDKRVGVPVAFFAPASVAKNLGGTSSRVIVTGDNEGNCKIFCEQRADGE 742
BLAST of mRNA_Ecto-sp13_S_contig12783.2302.1 vs. uniprot
Match: A0A196S6S1_BLAHN (Uncharacterized protein n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196S6S1_BLAHN) HSP 1 Score: 104 bits (259), Expect = 9.760e-20 Identity = 72/220 (32.73%), Postives = 109/220 (49.55%), Query Frame = 2
Query: 902 RLHHGGVRAMSFSPSGAFLATCGMDRRCCVFRVQRRRQTTALRAGSPNAAAAAVSLSVDRGMSRQPNSDSVEGRLIDDQPLRVLTGHVDSVVALAWAGGDNALLTGSSDGTVRCWHPLEGNECSEVYEHGGGVTSVAWEPGGEARGGRFLTGCMDARIRLFSLHSPEVEQSVLSERAVTAVAFCPGGQRFAAGGIAGNVEFYRMDNMSLELTVECR-RHG 1558
R H + M FS +LAT G D +++V R ++++ ++++ R+ +DQP+R TGH +V AW+ + LL+ S D TVR WHP N C +++H VTSV + P EA F++GCMD ++R++S+ V + + +T V FCPGG+ AAG G V FY D + +ECR RHG
Sbjct: 64 RHHQNAIWTMKFSCDRKYLATGGEDGVVNIWKV--------------------------RKVTKEEWKENMDVRIFEDQPVRSYTGHTSHIVDFAWSK-NGFLLSASLDCTVRLWHPDYDN-CLCIFKHKDMVTSVDFYPEEEAY---FISGCMDRKLRVWSIPQGCVLKWTQAPSVITTVTFCPGGRLCAAGLSDGQVIFYYSDGLRYFTQMECRNRHG 252
BLAST of mRNA_Ecto-sp13_S_contig12783.2302.1 vs. uniprot
Match: A0A6P5ZYP4_DURZI (WD repeat-containing protein 44-like isoform X1 n=3 Tax=Durio zibethinus TaxID=66656 RepID=A0A6P5ZYP4_DURZI) HSP 1 Score: 78.6 bits (192), Expect = 5.410e-11 Identity = 75/271 (27.68%), Postives = 121/271 (44.65%), Query Frame = 2
Query: 908 HHGGVRAMSFSPSGAFLATCGMDRRCCVFRV--QRRRQTTALRAGSP-------NAAAAAVSLSVDRGMSRQPNS-----DSV------EGRLIDDQPLRVLTGHVDSVVALAWAGGDNALLTGSSDGTVRCWHPLEGNECSEVYEHGGGVTSVAWEPGGEARGGRFLTGCMDARIRLFSLHSPEVEQSVLSERAVTAVAFCPGGQRFAAGGIAGNVEFYRMDNMSLELTVE-----------CRRHGFRHSAAQRTRL----ATSPVRRL 1615
H G + M FSP G +LA+ G D V++V R + + +P N + V L D+ + NS DS + I D+P+ GH V+ L+W+ + +L+ S D TVR W + +EC +V+ H VT V + P + F++G +D ++R++++H +V VTAV + P G+ G + G+ FY + L+L + CR GF+ S + +L A S VR L
Sbjct: 277 HEGSILTMKFSPDGQYLASAGEDGIVRVWQVVESERSGNSDIHDVNPSYFYFTVNNFSELVPLHADKDKKGKSNSVKKSSDSTCVIFPQKVFRILDKPIHEFRGHCGEVLDLSWSKNKH-ILSSSVDKTVRLWQ-VGYDECQKVFSHNNYVTCVQFNPVDDDY---FISGSIDGKVRIWTIHDCQVVDWTDVTDIVTAVCYRPDGKGAIIGSMTGSCRFYDASDNHLQLNAQICLQSKKKSPCCRITGFQFSPGEPDKLMVTSADSQVRIL 542
BLAST of mRNA_Ecto-sp13_S_contig12783.2302.1 vs. uniprot
Match: A0A8B8QXD0_9MYRT (uncharacterized protein LOC115755639 isoform X1 n=2 Tax=Rhodamnia argentea TaxID=178133 RepID=A0A8B8QXD0_9MYRT) HSP 1 Score: 77.0 bits (188), Expect = 1.820e-10 Identity = 62/237 (26.16%), Postives = 104/237 (43.88%), Query Frame = 2
Query: 908 HHGGVRAMSFSPSGAFLATCGMDRRCCVFRVQRRRQTTAL--------------RAGSPNAAAAAVSLSVDRGMSRQPNSDSVEGRL---------------IDDQPLRVLTGHVDSVVALAWAGGDNALLTGSSDGTVRCWHPLEGNECSEVYEHGGGVTSVAWEPGGEARGGRFLTGCMDARIRLFSLHSPEVEQSVLSERAVTAVAFCPGGQRFAAGGIAGNVEFYRMDNMSLE 1531
H+G + ++ FS G +LA+ G DR ++RV + L GSP +S +VD + R+ S R + ++P+ GH+D V+ L+W+ + LL+ S D TVR WH L C +V+ H VT + + P + F++G +DA++R++S+ +V VTA + P GQ G G+ Y + + L+
Sbjct: 422 HNGSIWSIKFSLDGRYLASAGEDRVIHIWRVSESERKGELVEKPEEGNFSLLFTATGSPERTT--LSPTVDNYLERKRRGRSSVSRKSVNVDHMLVPETMFSLTEKPICSFRGHLDDVLDLSWSKSQH-LLSSSMDKTVRLWH-LCSKSCLKVFSHSDYVTCIQFNPVDDRY---FISGSLDAKVRIWSIPDHQVVDWNDLHEMVTAACYTPDGQGALVGSYKGSCHLYDISDNKLQ 651
BLAST of mRNA_Ecto-sp13_S_contig12783.2302.1 vs. uniprot
Match: A0A1Q3CUH6_CEPFO (WD40 domain-containing protein n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3CUH6_CEPFO) HSP 1 Score: 77.0 bits (188), Expect = 1.890e-10 Identity = 62/233 (26.61%), Postives = 104/233 (44.64%), Query Frame = 2
Query: 908 HHGGVRAMSFSPSGAFLATCGMDRRCCVFRVQRRRQTTALRAGSPNAAAAAVSLSVDR-----GMSRQPNSDSVEGR---------------------LIDDQPLRVLTGHVDSVVALAWAGGDNALLTGSSDGTVRCWHPLEGNECSEVYEHGGGVTSVAWEPGGEARGGRFLTGCMDARIRLFSLHSPEVEQSVLSERAVTAVAFCPGGQRFAAGGIAGNVEFYRMDNMSL 1528
H G + + FS G FLA+ G D+ V+ VQ + ++ G+ ++S S DR +S P+ +G+ L+ ++P+ TGH+D V+ L+W+ LL+ S D TVR W +E C +++ H VT + + P + F++G +DA+IR++S+ +V VTA + P GQ G G Y ++ L
Sbjct: 391 HQGSIWTIKFSSDGRFLASAGEDKVIHVWEVQEC-EILSMNEGNLTPIHPSMSSSPDRPPVLGDISPMPSEKKKKGKGSSSRRANSIPDYVHVPETVCLLSEKPVCSFTGHLDDVLDLSWSRSQ-LLLSSSMDKTVRLWD-METKSCLKLFAHNDYVTCIHFNPMDDDY---FISGSLDAKIRIWSIPERQVVNWADLHEMVTAACYTPDGQGAVIGSHKGGCRMYCTEDCKL 617
BLAST of mRNA_Ecto-sp13_S_contig12783.2302.1 vs. uniprot
Match: A0A2G5C849_AQUCA (Uncharacterized protein n=1 Tax=Aquilegia coerulea TaxID=218851 RepID=A0A2G5C849_AQUCA) HSP 1 Score: 75.9 bits (185), Expect = 3.880e-10 Identity = 64/238 (26.89%), Postives = 103/238 (43.28%), Query Frame = 2
Query: 908 HHGGVRAMSFSPSGAFLATCGMDRRCCVFRV----QRRRQTTALRA----GSPNA--------AAAAVSLSVDRGMSRQPNSDSVEGR---------------LIDDQPLRVLTGHVDSVVALAWAGGDNALLTGSSDGTVRCWHPLEGNECSEVYEHGGGVTSVAWEPGGEARGGRFLTGCMDARIRLFSLHSPEVEQSVLSERAVTAVAFCPGGQRFAAGGIAGNVEFYRMDNMSL 1528
H G + + FS G +LA+ G D CV V + R+ L G+PN +A V ++D + ++ + R + ++PLR GH+D V+ L+W+ + LL+ S D TVR WH + N C +V+ H VT + + P + F++G +DA++R++S+ +V VTA + P GQ G GN Y L
Sbjct: 330 HSGSIWCIKFSLDGRYLASAGED---CVIHVWQVVESERKGDLLMEKQDDGNPNLYFAVNGSPESALVLSNIDSHLEKKRRGRTSISRKSISLEHIVVPESVFALSEKPLRSFRGHLDDVLDLSWSKSQH-LLSSSMDKTVRLWH-MASNSCLKVFSHSDYVTCIQFNPVDDRY---FISGSLDAKVRIWSIPDRQVVDWNDLHEMVTAACYTPDGQGALVGTYKGNCYLYNTSENKL 559
BLAST of mRNA_Ecto-sp13_S_contig12783.2302.1 vs. uniprot
Match: F6H267_VITVI (Uncharacterized protein n=3 Tax=Vitis TaxID=3603 RepID=F6H267_VITVI) HSP 1 Score: 75.1 bits (183), Expect = 7.010e-10 Identity = 57/240 (23.75%), Postives = 100/240 (41.67%), Query Frame = 2
Query: 908 HHGGVRAMSFSPSGAFLATCGMDRRCCVFRVQRRRQTTA------------------LRAGSPNAAAAAVSLSVDRGMSRQPNSDSVEGRLID--------------DQPLRVLTGHVDSVVALAWAGGDNALLTGSSDGTVRCWHPLEGNECSEVYEHGGGVTSVAWEPGGEARGGRFLTGCMDARIRLFSLHSPEVEQSVLSERAVTAVAFCPGGQRFAAGGIAGNVEFYRMDNMSLE 1531
H+G + ++ FS G +LA+ G D CV V + +T + +GSP + + ++ + ++ SV + + ++P GH D V+ L+W+ LL+ S D TVR WH L C +++ H VT + + P + F++G +DA++R++S+ +V VTA + P GQ G G+ Y L+
Sbjct: 402 HNGSIWSIKFSLDGRYLASAGED---CVIHVWQVVETERKGDLLTEKPEDGNLNLLFVASGSPEPTSMSPNVDNNSSEKKRRGRSSVSRKSVSLDHIKVPETVFGLSEKPFCSFQGHGDDVLDLSWSSKSQQLLSSSMDKTVRLWH-LSSKSCLKIFSHSDYVTCIQFNPVDDRY---FISGSLDAKVRIWSIPDRQVVDWNDLHEMVTAACYTPDGQGALVGSYKGSCRLYNTSENKLQ 634
BLAST of mRNA_Ecto-sp13_S_contig12783.2302.1 vs. uniprot
Match: A0A5B7B042_DAVIN (Putative WD repeat-containing protein 44 (Fragment) n=1 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B7B042_DAVIN) HSP 1 Score: 72.4 bits (176), Expect = 8.260e-10 Identity = 40/135 (29.63%), Postives = 67/135 (49.63%), Query Frame = 2
Query: 1127 IDDQPLRVLTGHVDSVVALAWAGGDNALLTGSSDGTVRCWHPLEGNECSEVYEHGGGVTSVAWEPGGEARGGRFLTGCMDARIRLFSLHSPEVEQSVLSERAVTAVAFCPGGQRFAAGGIAGNVEFYRMDNMSLE 1531
+ ++P+ GH+D V+ L+W+ + LL+ S D TVR WH L C +++ H VT + + P + F++G +DA++R++S+ +V VTA + P GQ G GN Y L+
Sbjct: 159 LSEKPICSFQGHLDDVLDLSWSKSQH-LLSSSMDKTVRLWH-LSSKSCLKIFSHSDYVTCIQFNPVDDKY---FISGSLDAKVRIWSIPDHQVVDWNDLHEMVTAACYTPDGQGALVGSYKGNCRLYNTSENKLQ 288
BLAST of mRNA_Ecto-sp13_S_contig12783.2302.1 vs. uniprot
Match: M5WQ47_PRUPE (Uncharacterized protein n=2 Tax=Prunus persica TaxID=3760 RepID=M5WQ47_PRUPE) HSP 1 Score: 73.6 bits (179), Expect = 2.040e-9 Identity = 60/237 (25.32%), Postives = 103/237 (43.46%), Query Frame = 2
Query: 908 HHGGVRAMSFSPSGAFLATCGMDRRCCVFRVQRRRQTTALRA--------------GSPNAAAAAVSLSVDRGMSRQPNSDSVEGR---------------LIDDQPLRVLTGHVDSVVALAWAGGDNALLTGSSDGTVRCWHPLEGNECSEVYEHGGGVTSVAWEPGGEARGGRFLTGCMDARIRLFSLHSPEVEQSVLSERAVTAVAFCPGGQRFAAGGIAGNVEFYRMDNMSLE 1531
H+G + ++ FS G +LA+ G D V++V + L GSP ++ VS +VD + ++ S R + ++P+ GH+D V+ L+W+ + LL+ S D TVR WH L C +++ H VT + + P + F++G +DA++R++S+ +V VTA + P GQ G G+ Y L+
Sbjct: 371 HNGSIWSIKFSLDGKYLASAGEDCVIHVWKVMESERKGDLLMEKSEDSNFNLLFSNGSPEPSS--VSPNVDNHVEKKRRGRSSISRKSVSSDHYVIPETVFALSEKPISSFQGHLDDVLDLSWSKSQH-LLSSSMDKTVRLWH-LSTKTCLKIFSHSDYVTCIQFNPVDDRY---FISGSLDAKVRIWSIPDRQVVDWNDLHEMVTAACYTPDGQGALVGSYKGSCRLYNTSENKLQ 600
BLAST of mRNA_Ecto-sp13_S_contig12783.2302.1 vs. uniprot
Match: A0A1D6IU83_MAIZE (Transducin/WD40 repeat-like superfamily protein n=4 Tax=Zea mays TaxID=4577 RepID=A0A1D6IU83_MAIZE) HSP 1 Score: 73.6 bits (179), Expect = 2.080e-9 Identity = 68/242 (28.10%), Postives = 104/242 (42.98%), Query Frame = 2
Query: 908 HHGGVRAMSFSPSGAFLATCGMDRRCCVFRVQRRRQTTAL--------RAG------SPNAAAAAVSLSVDR--GMSRQPNSDSVEGR--------------LIDDQPLRVLTGHVDSVVALAWAGGDNALLTGSSDGTVRCWHPLEGNECSEVYEHGGGVTSVAWEPGGEARGGRFLTGCMDARIRLFSLHSPEVEQSVLSERAVTAVAFCPGGQRFAAGGIAGNVEFYRMDNMSLELTVE 1543
H G + ++ FS G LA+ G D V RV + +T+A ++G SP AA A S + M ++P GR + +QP VL GH D V+ L W+ D LL+ S D TVR W E C + + H VT + + P + F++G +DA++RL+S+ +V VTA ++ P GQ G G+ Y+ + L +
Sbjct: 415 HEGSIWSIKFSADGRRLASAGED---SVVRVWQVVETSAPPCSLAMDGKSGPLAPLPSPGAADGASSTTTPALASMPKKPAKGKSGGRDALPEHLVVPDKVFALAEQPACVLEGHQDDVLDLTWSKSDQ-LLSSSMDKTVRLWD-TESQACLKTFAHSDYVTCIQFNPVDDRY---FISGSLDAKVRLWSIPDRQVVDWTDLNEMVTAASYTPDGQGAIIGSHKGSCRLYKTADCKLSAEAQ 648 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12783.2302.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig12783.2302.1 >prot_Ecto-sp13_S_contig12783.2302.1 ID=prot_Ecto-sp13_S_contig12783.2302.1|Name=mRNA_Ecto-sp13_S_contig12783.2302.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=744bp MPPLPAKKSPGTSDAASSNLAKQPPALSPRAVSSLKPDTDDGATFESFLSback to top mRNA from alignment at Ecto-sp13_S_contig12783:1357..4916- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig12783.2302.1 ID=mRNA_Ecto-sp13_S_contig12783.2302.1|Name=mRNA_Ecto-sp13_S_contig12783.2302.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3560bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12783:1357..4916- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12783:1357..4916- >mRNA_Ecto-sp13_S_contig12783.2302.1 ID=mRNA_Ecto-sp13_S_contig12783.2302.1|Name=mRNA_Ecto-sp13_S_contig12783.2302.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2232bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12783:1357..4916- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |