prot_Ecto-sp13_S_contig1278.2298.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1278.2298.1
Unique Nameprot_Ecto-sp13_S_contig1278.2298.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length288
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1278.2298.1 vs. uniprot
Match: D8LJT8_ECTSI (Similar to regulator of G-protein signaling 7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJT8_ECTSI)

HSP 1 Score: 421 bits (1082), Expect = 1.500e-144
Identity = 217/233 (93.13%), Postives = 218/233 (93.56%), Query Frame = 0 
Query:   55 FQRLMKATLRTHLTLEFVLRLPAGKEAFLRHLKDEYAEENFYFWQSSDQFASSIPTLAKAQTLYDGYIREGAPKQARSFATFFDVNISASTRKGIREKWQAVQNGEAPLTRKLFSKAQDEVFHLMYRDNFGRFQKSAKSMEDFVNCMFKEVDRSHDGTISLSEYMEWATKNRDVMRFMRATGGEVAVIRRLSSSRNPSGAKTSLVAIEVRCCSFAVDGTRSLAGLPSMLSLLR 287
            FQRLMKATLRTHLTLEFVLRLPAGKEAFLRHLKDEYAEENFYFWQSSDQFASSIPTLAKAQTLYDGYIREGAPKQ         VNISASTRKGIREKWQAVQ+GEAPLTRKLFSKAQDEVFHLMYRDNFGRFQKSAKSMEDFVNCMFKEVDRSHDGTISLSEYMEWATKNRDVMRFMRATGGEVAVIRRLSSSRNP GAKTSLVAIEVR C FAV GTRSLA L SMLSLLR
Sbjct:  189 FQRLMKATLRTHLTLEFVLRLPAGKEAFLRHLKDEYAEENFYFWQSSDQFASSIPTLAKAQTLYDGYIREGAPKQ---------VNISASTRKGIREKWQAVQHGEAPLTRKLFSKAQDEVFHLMYRDNFGRFQKSAKSMEDFVNCMFKEVDRSHDGTISLSEYMEWATKNRDVMRFMRATGGEVAVIRRLSSSRNPLGAKTSLVAIEVRFCCFAVGGTRSLAALSSMLSLLR 412
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BLAST of mRNA_Ecto-sp13_S_contig1278.2298.1 vs. uniprot
Match: A0A7S2FIR4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FIR4_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 1.830e-9
Identity = 33/109 (30.28%), Postives = 62/109 (56.88%), Query Frame = 0 
Query:  128 KQARSFATFFDVNISASTRKGIREKWQAVQNGEAPLTRKLFSKAQDEVFHLMYRDNFGRFQKSAKSMEDFVNCMFKEVDRSHDGTISLSEYMEWATKNRDVMRFMRATG 236
            +Q R  A F   + +A+      E   A + G  P  + +F++A++EV+ L+ +DNF RFQK+  S+++ V+  F  +D ++ G I + E+  WA +N D +  +++ G
Sbjct:   40 QQERIVAAFAKADETATAAXXXXED-AAAKTGLVP--KDVFAEAKEEVYELLEKDNFARFQKTRGSVDEMVDNFFHHIDENNSGAIDMEEFKTWAHRNPDSLNLLQSLG 145
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BLAST of mRNA_Ecto-sp13_S_contig1278.2298.1 vs. uniprot
Match: A0A2R5GPC7_9STRA (cAMP-dependent protein kinase regulatory subunit n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GPC7_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 2.710e-7
Identity = 52/153 (33.99%), Postives = 71/153 (46.41%), Query Frame = 0 
Query:   63 LRTHLTLEFVLRLPAGKEAFLRHLKDEYAEENFYFWQSSDQF-------------------ASSIPTLAK------AQTLYDGYIREGAPKQARSFATFFDVNISASTRKGIREKWQAVQNGEAPLTRKLFSKAQDEVFHLMYRDNFGRFQKS 190
            L T  TLE VLR   G+EAF +H+  E+A EN  FW + ++                    ASSI    +      A  +YD +I + AP Q         VN+ A+    I+ K  A +N +     K+FS A+ EVF LM +D F RFQ S
Sbjct:  407 LGTRATLEDVLRHHLGREAFQKHIAKEFATENVDFWAAVEKLENISRRRVRKSVLGALHVQASSITEKKQGMLREQALQIYDEFIADDAPSQ---------VNLPAAMVAQIKAKMDA-ENYDF----KMFSDAKQEVFSLMSKDTFARFQAS 545
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1278.2298.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LJT8_ECTSI1.500e-14493.13Similar to regulator of G-protein signaling 7 n=1 ... [more]
A0A7S2FIR4_9STRA1.830e-930.28Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A2R5GPC7_9STRA2.710e-733.99cAMP-dependent protein kinase regulatory subunit n... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016137RGS domainPRINTSPR01301RGSPROTEINcoord: 65..86
score: 24.6
coord: 171..190
score: 43.04
coord: 87..105
score: 35.7
IPR016137RGS domainSMARTSM00315RGS_3coord: 68..201
e-value: 2.2E-9
score: 47.2
IPR016137RGS domainPFAMPF00615RGScoord: 70..191
e-value: 1.5E-13
score: 51.1
IPR016137RGS domainPROSITEPS50132RGScoord: 68..190
score: 19.647
NoneNo IPR availableGENE3D1.20.58.1850coord: 57..201
e-value: 1.7E-22
score: 81.6
NoneNo IPR availablePANTHERPTHR10845REGULATOR OF G PROTEIN SIGNALINGcoord: 62..192
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 206..218
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 193..228
score: 10.022
IPR036305RGS domain superfamilySUPERFAMILY48097Regulator of G-protein signaling, RGScoord: 63..191
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 187..233

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1278contigEcto-sp13_S_contig1278:7139..11767 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1278.2298.1mRNA_Ecto-sp13_S_contig1278.2298.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1278 7139..13954 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1278.2298.1 ID=prot_Ecto-sp13_S_contig1278.2298.1|Name=mRNA_Ecto-sp13_S_contig1278.2298.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=288bp
MAWFASRIPFSTKTGMERWTEKRQDPSLWKHNLANISWHFDPIFAHNISR
PRFAFQRLMKATLRTHLTLEFVLRLPAGKEAFLRHLKDEYAEENFYFWQS
SDQFASSIPTLAKAQTLYDGYIREGAPKQARSFATFFDVNISASTRKGIR
EKWQAVQNGEAPLTRKLFSKAQDEVFHLMYRDNFGRFQKSAKSMEDFVNC
MFKEVDRSHDGTISLSEYMEWATKNRDVMRFMRATGGEVAVIRRLSSSRN
PSGAKTSLVAIEVRCCSFAVDGTRSLAGLPSMLSLLR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016137RGS
IPR018247EF_Hand_1_Ca_BS
IPR002048EF_hand_dom
IPR036305RGS_sf
IPR011992EF-hand-dom_pair