prot_Ecto-sp13_S_contig12778.2297.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12778.2297.1
Unique Nameprot_Ecto-sp13_S_contig12778.2297.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length273
Homology
BLAST of mRNA_Ecto-sp13_S_contig12778.2297.1 vs. uniprot
Match: D8LNM4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNM4_ECTSI)

HSP 1 Score: 486 bits (1250), Expect = 1.600e-172
Identity = 247/272 (90.81%), Postives = 262/272 (96.32%), Query Frame = 0
Query:    1 MTSSSLGGYGSTEYSSQAAQAALYAEMFSLKCNAGFFVVGLQEGEAVCTPIRVISTLITMSVASAWFSRRKSIKKLLLFFSHWLSGLLHQLIFMTEATMISVCWAGDSLTALIKTLKFFELASSNMLAITNLAICINLALIVMSHRTLSRVRSASTPTLILVFLGLSLGAAAISVPFWTEMVVSGTAFWVRSDEQVARNWIVVSGFYIEFFVGICMLIVVVWLLIFRSTEVKESWKMHARIRYYFGLTLIATGVNLALGICGTIYVVGGRKE 272
            MTSSSLGGYGSTEYSSQAAQAALYAEMFSLKCNAGFFVVGLQEGEAVCTPIRVISTLITMSVASAWFSRRKSIKKLLLFFSHWLSGLLHQL+FMTEATM+SVCWAGDSLT LIKTLKFFELA+SNMLAITNLAIC+NLALIVMSHRTLSRVRSASTP LILVFL LSLG AAISVPFWTEMVVSGTAFWV++ EQ A +WIVV+GF++EFFVGICML++VVWL+IFR TE+K+SWKMHARIRYYFGLTLIATGVNLALGICGTIYVVG  KE
Sbjct:    1 MTSSSLGGYGSTEYSSQAAQAALYAEMFSLKCNAGFFVVGLQEGEAVCTPIRVISTLITMSVASAWFSRRKSIKKLLLFFSHWLSGLLHQLVFMTEATMVSVCWAGDSLTKLIKTLKFFELAASNMLAITNLAICVNLALIVMSHRTLSRVRSASTPALILVFLALSLGVAAISVPFWTEMVVSGTAFWVQTHEQAAHDWIVVAGFFVEFFVGICMLVIVVWLVIFRRTEIKQSWKMHARIRYYFGLTLIATGVNLALGICGTIYVVGDMKE 272          
BLAST of mRNA_Ecto-sp13_S_contig12778.2297.1 vs. uniprot
Match: D7FTK5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK5_ECTSI)

HSP 1 Score: 267 bits (683), Expect = 1.580e-85
Identity = 130/243 (53.50%), Postives = 177/243 (72.84%), Query Frame = 0
Query:   30 LKCNAGFFVVGLQEGEAVCTPIRVISTLITMSVASAWFSRRKSIKKLLLFFSHWLSGLLHQLIFMTEATMISVCWAGDSLTALIKTLKFFELASSNMLAITNLAICINLALIVMSHRTLSRVRSASTPTLILVFLGLSLGAAAISVPFWTEMVVSGTAFWVRSDEQVARNWIVVSGFYIEFFVGICMLIVVVWLLIFRSTEVKESWKMHARIRYYFGLTLIATGVNLALGICGTIYVVGGRKE 272
            L C  GF  +GLQEGE   TPIRV+STL+++SV SAW S  K +K+L LFF+HWLSGL+  L F+ E  M++VCW    L   IK +KF E  SSNM+AIT+LAIC+NLALIV SHRTL+RV+S S+P L+ + L +S+G  +++VP W  + V GT FW+ + +Q + + +VVS F++EF VGICM +++ WLL+FR  EVKE W++ ARIRYYF LTL+ T VN+ +GIC T++V+G   E
Sbjct:    5 LSCETGFTAIGLQEGEDKITPIRVLSTLVSVSVVSAWCSWTK-VKRLSLFFAHWLSGLVWGLCFVVEDMMVTVCWTESDLIGFIKAVKFIEFVSSNMMAITHLAICVNLALIVSSHRTLTRVQSVSSPWLLSLLLAISIGITSVTVPLWETVYVIGTGFWIVNSDQGSYDAVVVSIFFLEFMVGICMFVILAWLLLFRMKEVKECWRIDARIRYYFCLTLLGTAVNIGIGICSTVFVIGDMDE 246          
BLAST of mRNA_Ecto-sp13_S_contig12778.2297.1 vs. uniprot
Match: D8LNM5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNM5_ECTSI)

HSP 1 Score: 231 bits (588), Expect = 3.120e-73
Identity = 114/178 (64.04%), Postives = 140/178 (78.65%), Query Frame = 0
Query:   96 EATMISVCWAGDSLTALIKTLKFFELASSNMLAITNLAICINLALIVMSHRTLSR-VRSASTPTLILVFLGLSLGAAAISVPFWTEMVVSGTAFWVRSDEQVARNWIVVSGFYIEFFVGICMLIVVVWLLIFRSTEVKESWKMHARIRYYFGLTLIATGVNLALGICGTIYVVGGRKE 272
            +ATMISVCW G +L  LIKT KF ELAS NMLA+TNLAIC+NLAL+VMSH      V S S+P LI+V L +S+GAAA + PFW  +++SGT F+  ++ Q   +WI +S FY+EFFVGICM ++V WLL+FR TE+KE WKMHARIRYYFGLTLIATGVNL LGICG IY++G R+E
Sbjct:    2 QATMISVCWTGANLIKLIKTFKFLELASVNMLAMTNLAICMNLALVVMSHGDQQPGVNSLSSPLLIVVSLVISIGAAAAAAPFWEFIILSGTGFFPETENQRGSDWITISRFYLEFFVGICMFVIVAWLLLFRMTEIKECWKMHARIRYYFGLTLIATGVNLILGICGVIYLIGDREE 179          
BLAST of mRNA_Ecto-sp13_S_contig12778.2297.1 vs. uniprot
Match: D8LNN1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNN1_ECTSI)

HSP 1 Score: 233 bits (594), Expect = 1.670e-72
Identity = 109/174 (62.64%), Postives = 140/174 (80.46%), Query Frame = 0
Query:   99 MISVCWAGDSLTALIKTLKFFELASSNMLAITNLAICINLALIVMSHRTLSRVRSASTPTLILVFLGLSLGAAAISVPFWTEMVVSGTAFWVRSDEQVARNWIVVSGFYIEFFVGICMLIVVVWLLIFRSTEVKESWKMHARIRYYFGLTLIATGVNLALGICGTIYVVGGRKE 272
            M+ VCWAG ++T  +K LKF EL +SNMLAITNLAIC NLAL++MSHRTL+RV+S S+P+L+ + L +S+  A  + PFW   VVSGT F VR+++Q + +W+ VS F++EF VGICM ++V WLL+FR  EVKE WK+HARIRYYFGLTLI T VNLALG+CGTIYVVGGR++
Sbjct:    1 MVLVCWAGSNVTGFVKALKFLELVASNMLAITNLAICANLALVIMSHRTLARVKSFSSPSLVFLSLAVSIAVAVAAAPFWQTTVVSGTGFAVRNEDQRSGDWLAVSRFFLEFLVGICMFVIVAWLLLFRINEVKECWKVHARIRYYFGLTLIGTTVNLALGVCGTIYVVGGREK 174          
BLAST of mRNA_Ecto-sp13_S_contig12778.2297.1 vs. uniprot
Match: A0A6H5JZY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZY2_9PHAE)

HSP 1 Score: 223 bits (569), Expect = 1.840e-69
Identity = 123/236 (52.12%), Postives = 150/236 (63.56%), Query Frame = 0
Query:   82 HWLSGLLHQLIFMTEATMISVCWAGDSLTALIKTLKFFELASSNMLAITNLAICINLALIVMS-----------HRTLSR----------------------------------VRSASTPTLILVFLGLSLGAAAISVPFWTEMVVSGTAFWVRSDEQVARNWIVVSGFYIEFFVGICMLIVVVWLLIFRSTEVKESWKMHARIRYYFGLTLIATGVNLALGICGTIYVVGGRKE 272
            H+  GLL+QL+ + +ATMISVCWAG +L  LIKT KF ELAS NMLA TNLAICINLAL+VMS           H   S                                   V S S+P LI+V L +S+GAAA + PFW  +++SGT F+  ++ Q   +WI VS FY+EFFVGICM ++V WLL+FR TE+KE WK HARIRYYFGLTLIATGVNL LGICG IY++G R+E
Sbjct:    7 HFSCGLLYQLLILMQATMISVCWAGANLIKLIKTFKFLELASVNMLATTNLAICINLALVVMSESINNTSPSAPHGICSLLPLSGTSVCGLLSLVLPTVGDTAQLQSHGDQQPGVNSLSSPLLIMVSLVISIGAAAAAAPFWDFIILSGTGFFPETENQRGSDWITVSRFYLEFFVGICMFVIVAWLLLFRMTEIKECWKTHARIRYYFGLTLIATGVNLILGICGVIYLIGDREE 242          
BLAST of mRNA_Ecto-sp13_S_contig12778.2297.1 vs. uniprot
Match: A0A6H5K8K6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K6_9PHAE)

HSP 1 Score: 221 bits (563), Expect = 4.870e-68
Identity = 112/173 (64.74%), Postives = 132/173 (76.30%), Query Frame = 0
Query:   94 MTEATMISVCWAGDSLTALIKTLKFFELASSNMLAITNLAICINLALIVMSHRTLSRVRSASTPTLILVFLGLSLGAAAISVPFWTEMVVSGTAFWVRSDEQVARNWIVVSGFYIEFFVGICMLIVVVWLLIFRSTEVKESWKMHARIRYYFGLTLIATGVNLALGICGTIYV 266
            MT+ TMISVCW G+ L   IK LK+ E  SSNMLAITNLAICINLAL+V SHRTLSRV S STP L+L+FL +S+ AAA SVPFW+  VVSGTAFWV + ++   +WI+VS   +EF VGICM I+V WL+ FR   +KE WK+HARIRYYF LT+I T VNLALGI G  YV
Sbjct:    3 MTQGTMISVCWVGERLEGFIKALKYLEQTSSNMLAITNLAICINLALVVNSHRTLSRVNSVSTPALVLLFLAISVVAAAASVPFWSITVVSGTAFWVTNADKAKADWIIVSIIILEFVVGICMFIIVSWLMAFRMRAIKECWKLHARIRYYFVLTVIGTAVNLALGISGFSYV 175          
BLAST of mRNA_Ecto-sp13_S_contig12778.2297.1 vs. uniprot
Match: D8LNN2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNN2_ECTSI)

HSP 1 Score: 217 bits (553), Expect = 5.330e-68
Identity = 110/168 (65.48%), Postives = 130/168 (77.38%), Query Frame = 0
Query:   99 MISVCWAGDSLTALIKTLKFFELASSNMLAITNLAICINLALIVMSHRTLSRVRSASTPTLILVFLGLSLGAAAISVPFWTEMVVSGTAFWVRSDEQVARNWIVVSGFYIEFFVGICMLIVVVWLLIFRSTEVKESWKMHARIRYYFGLTLIATGVNLALGICGTIYV 266
            MISVCW G+ L   IK LK+ E  SSNMLAITNLAICINLAL+V SHRTLSRV+S STP L+L+FL +S+ AAA SVPFW+  VVSGTAFWV + ++   +WI+VS   +EF VGICM ++V WL+ FR   +KE WK+HARIRYYF LTLIAT VNLALGI G  YV
Sbjct:    1 MISVCWVGERLEGFIKALKYLEQTSSNMLAITNLAICINLALVVNSHRTLSRVKSVSTPALVLLFLAISVIAAAASVPFWSITVVSGTAFWVTNADKAKADWIIVSIIILEFVVGICMFVIVSWLMAFRMQAIKECWKIHARIRYYFVLTLIATAVNLALGISGLSYV 168          
BLAST of mRNA_Ecto-sp13_S_contig12778.2297.1 vs. uniprot
Match: A0A6H5KRY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRY2_9PHAE)

HSP 1 Score: 216 bits (549), Expect = 2.530e-67
Identity = 108/170 (63.53%), Postives = 135/170 (79.41%), Query Frame = 0
Query:   99 MISVCWAGDSLTALIKTLKFFELASSNMLAITNLAICINLALIVMSHRTLSRVRSASTPTLILVFLGLSLGAAAISVPFWTEMVVSGTAFWVRSDEQVARNWIVVSGFYIEFFVGICMLIVVVWLLIFRSTEVKESWKMHARIRYYFGLTLIATGVNLALGICGTIYVVG 268
            MISVCWAG +L+ LIK LKF ELAS+NMLA+TNLAIC+NLAL+VMSHRTLSRV S S+P +I + L L++G AA +VP W  ++++GT F   S+++   +W VVS F  EF VGICM+ +V WLL+FR  E+KE WK+H RIRYYFGLTLIATGVNL LGI GT+Y+VG
Sbjct:    1 MISVCWAGGNLSNLIKFLKFLELASANMLAVTNLAICVNLALVVMSHRTLSRVSSLSSPRVIWLSLVLAVGGAAAAVPSWKTIILTGTYFSPYSEDKQDLDWSVVSRFLFEFIVGICMIAIVAWLLLFRMKEIKECWKVHTRIRYYFGLTLIATGVNLVLGIFGTVYIVG 170          
BLAST of mRNA_Ecto-sp13_S_contig12778.2297.1 vs. uniprot
Match: D7FTK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK4_ECTSI)

HSP 1 Score: 216 bits (550), Expect = 4.580e-66
Identity = 100/188 (53.19%), Postives = 146/188 (77.66%), Query Frame = 0
Query:   85 SGLLHQLIFMTEATMISVCWAGDSLTALIKTLKFFELASSNMLAITNLAICINLALIVMSHRTLSRVRSASTPTLILVFLGLSLGAAAISVPFWTEMVVSGTAFWVRSDEQVARNWIVVSGFYIEFFVGICMLIVVVWLLIFRSTEVKESWKMHARIRYYFGLTLIATGVNLALGICGTIYVVGGRKE 272
            +G++  L ++ E  M++VCWAG +L  LIKT+KF ELASS+MLA+T+LAIC+NLALIV SHRTL RV+S S+P L+ + L +S+G  A +VP W  ++V GT+FW+ + +Q   + +VVS F++EF VG+CM ++V WLL+FR  EVKE W++HARIRYY  LT++ TG++L++GIC T++V+GG K+
Sbjct:   10 TGIIWSLCWLVEDMMVTVCWAGKNLEDLIKTVKFVELASSHMLALTHLAICVNLALIVSSHRTLKRVQSVSSPGLLTLMLAISMGMTAATVPLWETVIVVGTSFWIVNSDQGKYDAVVVSIFFLEFIVGLCMFVIVAWLLLFRLKEVKECWRIHARIRYYLCLTVLGTGISLSIGICSTVFVLGGLKQ 197          
BLAST of mRNA_Ecto-sp13_S_contig12778.2297.1 vs. uniprot
Match: D8LNP0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNP0_ECTSI)

HSP 1 Score: 211 bits (538), Expect = 7.820e-65
Identity = 104/169 (61.54%), Postives = 129/169 (76.33%), Query Frame = 0
Query:   99 MISVCWAGDSLTALIKTLKFFELASSNMLAITNLAICINLALIVMSHRTLSRVRSASTPTLILVFLGLSLGAAAISVPFWTEMVVSGTAFWVRSDEQVARNWIVVSGFYIEFFVGICMLIVVVWLLIFRSTEVKESWKMHARIRYYFGLTLIATGVNLALGICGTIYVV 267
            MISVCWAG++L   IKTLKF EL +SNMLAITNLAIC+NL+LIVMS R  S V+S ST  L+L+FL LS G AAI+VPFW   V+SGT FW   + +    ++++S F +EF VGICM ++V WLL+FR TE+KE W MHA +RYYFGLTL+ T  NL LG+CGTIYV+
Sbjct:    1 MISVCWAGENLATFIKTLKFLELFASNMLAITNLAICVNLSLIVMSRRPQSHVKSISTHKLVLLFLALSAGLAAIAVPFWGLTVLSGTGFWELGENKRDHEFVMISTFMVEFLVGICMFVIVSWLLLFRMTEIKECWMMHACLRYYFGLTLLGTVGNLTLGVCGTIYVI 169          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12778.2297.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
D8LNM4_ECTSI1.600e-17290.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FTK5_ECTSI1.580e-8553.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LNM5_ECTSI3.120e-7364.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LNN1_ECTSI1.670e-7262.64Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JZY2_9PHAE1.840e-6952.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8K6_9PHAE4.870e-6864.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNN2_ECTSI5.330e-6865.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KRY2_9PHAE2.530e-6763.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTK4_ECTSI4.580e-6653.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LNP0_ECTSI7.820e-6561.54Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 225..243
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 143..153
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 76..102
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..75
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 154..179
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 122..142
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 103..121
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 180..198
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 244..267
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 268..272
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 199..224
NoneNo IPR availableTMHMMTMhelixcoord: 202..224
NoneNo IPR availableTMHMMTMhelixcoord: 245..267
NoneNo IPR availableTMHMMTMhelixcoord: 118..140
NoneNo IPR availableTMHMMTMhelixcoord: 76..98
NoneNo IPR availableTMHMMTMhelixcoord: 160..182

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12778contigEcto-sp13_S_contig12778:588..4855 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12778.2297.1mRNA_Ecto-sp13_S_contig12778.2297.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12778 588..4855 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12778.2297.1 ID=prot_Ecto-sp13_S_contig12778.2297.1|Name=mRNA_Ecto-sp13_S_contig12778.2297.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=273bp
MTSSSLGGYGSTEYSSQAAQAALYAEMFSLKCNAGFFVVGLQEGEAVCTP
IRVISTLITMSVASAWFSRRKSIKKLLLFFSHWLSGLLHQLIFMTEATMI
SVCWAGDSLTALIKTLKFFELASSNMLAITNLAICINLALIVMSHRTLSR
VRSASTPTLILVFLGLSLGAAAISVPFWTEMVVSGTAFWVRSDEQVARNW
IVVSGFYIEFFVGICMLIVVVWLLIFRSTEVKESWKMHARIRYYFGLTLI
ATGVNLALGICGTIYVVGGRKE*
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