mRNA_Ecto-sp13_S_contig1277.2293.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1277.2293.1 vs. uniprot
Match: A0A6H5L6C5_9PHAE (WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6C5_9PHAE) HSP 1 Score: 1216 bits (3145), Expect = 0.000e+0 Identity = 758/989 (76.64%), Postives = 806/989 (81.50%), Query Frame = 1
Query: 1 MAPAGDDDEKLPTTKEAEDGAPPESEEDYVEAVTRHAKYLGMDPERDGAYMWIAEEALNAEVPEGWVTGEGEGEYEGLVYYYNEATGESTWDHPLDEYYREKFKRKKARRAAREKEDKGNRQDSKSRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXEKDGSSNGVANGDQGSQSSGHRDSAKRSKTRKYSRRHMDDGERXXXXSTSSRNQRTDNNGDGRDERRSSKHRRNASNRHSDSGRAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGESDRSKLDEPPEEREIQ-QESPSKSPGPDKHRSRSRERGARDEKRESFEPDRKERTRGSRQEVSMQLEEANRGGRTTVATDSGDLAAAADNWRTKSIVGGTTYSHNEKSGHHDGNRSAADSRNGNAGSEARRGGFREDTDRESGHRTANTTVERAESVVNVLEVQSNTVSVQDDPVNKVDMPAVHHNVHGRSATQASPAAWKNNDMEEIDFEDELRDMEEGDGDPNVRHESPTKMEAPDAEPQRRSSSTIPGVGSDTKNQGEPLSSPPMSKVAAIAVDDKARRSRSRDHPNKACKANKLGNEDEPHSRRGSSGERGVKSRESGLPSAAGTADRDLNDWPEVASNPAEEDTSGGSGKEQKGKRYSDAHGTRTVRESRAETGRRGRERDDQPDVVLANAADRNRSHGEDSDDHWRGNAGTRGYDRNVERTSERESRRVRHGGGIERDPDSGMASPHRGDRTDRNDRQGGHSGRRSTARGSTASPRRPSGSRRGDNGEDQFSVGDR-GHQYSSFGDVEGQRWGGGERVKAMQRDRRDEDMQQMTREKDTVERQLQQQQQEAAEKARELETKVLKLEASLASSTSREDLLRRELADAARREGFAQEKHERALSEQERKAASLKEKLAEAASKTSEISVAGVAEQEKEEGLRLEVKNALKRAEAAEGALARKEEAEKVSAERESEVPRLQLLLA 2961
MAPAGDDDE+LPTTK AEDGAPPESEEDYVEAVTRHAKYLGMDPERDG YMWIAEEALNA+VPEGWVTGEGEGEYEGLVYYYNEATGESTWDHPLDEYYREKFKRKKARRAARE +DKGNRQDSKSR XXXXXXXXX S EKDGSSNGVANGDQGSQSSG RD+AKRSKTRK SRRH DDGER STS +QRTD+NGDGRDERRSSKHRRNASN HSDSGRAH XXXXXXXXXXXXXXXXXXXXX GES RSKLDEPPE+RE Q +ESPSKSP PDKH SRS+ERG RDE RESFEPDRKER RGSRQEVSMQLEE NRGGRTTVAT SGDLAAAADNWRTKSIVGG+TYSHNEK HHD NRSAADSR GNAGS+ARRGGFREDTDRESGHRTANTTVERAESVVN E++SNT+ VQ DP NKVDMPAVH +V GRSATQAS AAWKNNDMEEIDFEDELRDMEEGDG PNVRH+SPT+MEAPD EPQ RS S + VGSDTKNQGEPL SPPM K AAIA DDKAR+SRSRDHPNKA K NKLGNEDEPHSRR +SGERGVKSRE+GLP+ AGTAD DL+DWPEVASNPA+E G SG EQKGKRYS+AHGT+TVRESR ETGRRGRERDDQPDVV AN DRNR HGEDSDDH RG T+GYDR+VERTSERESRR+RHGGGI+RD DSGMASP R DRTDRNDRQGGHSGRRSTA+GSTASPR+PSG+ GD G DQ+S GDR HQYSSFGDVEGQRWGGGERV AMQRDRRDED+Q MTREKD +ERQLQQQQ EAAEKARELETKV L S ++++ RR + +H R+ + ++SVAGVA +EKEEGLRLE+KNALKRAEAAEGALARKEEAEKV AERESEVPRLQLLLA
Sbjct: 1 MAPAGDDDEQLPTTKGAEDGAPPESEEDYVEAVTRHAKYLGMDPERDGTYMWIAEEALNAKVPEGWVTGEGEGEYEGLVYYYNEATGESTWDHPLDEYYREKFKRKKARRAARENDDKGNRQDSKSRXXXXXXXXXXSTCSRRHRSGDDTANDERSESRSRREHTKEKDGSSNGVANGDQGSQSSGRRDNAKRSKTRKVSRRHRDDGERSRHRSTSXXSQRTDDNGDGRDERRSSKHRRNASNGHSDSGRAHRSEEXXXXXXXXXXXXXXXXXXXXXESSSGRHQCRTRDKTRRSSSGDGESVRSKLDEPPEKREKQVEESPSKSPRPDKHHSRSQERGRRDENRESFEPDRKERGRGSRQEVSMQLEETNRGGRTTVATVSGDLAAAADNWRTKSIVGGSTYSHNEKKSHHDANRSAADSRKGNAGSQARRGGFREDTDRESGHRTANTTVERAESVVN--EIKSNTLCVQKDPGNKVDMPAVHRSVDGRSATQASTAAWKNNDMEEIDFEDELRDMEEGDGGPNVRHDSPTEMEAPDTEPQGRSPSAVSEVGSDTKNQGEPLPSPPMFKAAAIAGDDKARQSRSRDHPNKAGKGNKLGNEDEPHSRRDTSGERGVKSRENGLPATAGTADPDLDDWPEVASNPAKERAWGDSGTEQKGKRYSNAHGTQTVRESRVETGRRGRERDDQPDVVFANGVDRNRIHGEDSDDHRRGTGATQGYDRHVERTSERESRRLRHGGGIQRDRDSGMASPRREDRTDRNDRQGGHSGRRSTAKGSTASPRQPSGNHGGDCGADQYSSGDRWDHQYSSFGDVEGQRWGGGERVSAMQRDRRDEDVQPMTREKDKLERQLQQQQHEAAEKARELETKV---HVGLGCGWSFSEIIKH-----LRRHLAVEPEHNRSFTHH--------------LWHIFQMSVAGVAGKEKEEGLRLELKNALKRAEAAEGALARKEEAEKVPAERESEVPRLQLLLA 965
BLAST of mRNA_Ecto-sp13_S_contig1277.2293.1 vs. uniprot
Match: D7G7M1_ECTSI (WW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7M1_ECTSI) HSP 1 Score: 989 bits (2557), Expect = 0.000e+0 Identity = 681/988 (68.93%), Postives = 712/988 (72.06%), Query Frame = 1
Query: 1 MAPAGDDDEKLPTTKEAEDGAPPESEEDYVEAVTRHAKYLGMDPERDGAYMWIAEEALNAEVPEGWVTGEGEGEYEGLVYYYNEATGESTWDHPLDEYYREKFKRKKARRAAREKEDKGNRQDSKSRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXEKDGSSNGVANGDQGSQSSGHRDSAKRSKTRKYSRRHMDDGERXXXXSTSSRNQRTDNNGDGRDERRSSKHRRNASNRHSDSGRAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGESDRSKLDEPPEEREIQQESPSKSPGPDKHRSRSRERGARDEKRESFEPDRKERTRGSRQEVSMQLEEANRGGRTTVATDSGDLAAAADNWRTKSIVGGTTYSHNEKSGHHDGNRSAADSRNGNAGSEARRGGFREDTDRESGHRTANTTVERAESVVNVLEVQSNTVSVQDDPVNKVDMPAVHHNVHGRSATQASPAAWKNNDMEEIDFEDELRDMEEGDGDPNVRHESPTKMEAPDAEPQRRSSSTIPGVGSDTKNQGEPLSSPPMSKVAAIAVDDKARRSRSRDHPNKACKANKLGNEDEPHSRRGSSGERGVKSRESGLPSAAGTADRDLNDWPEVASNPAEEDTSGGSGKEQKGKRYSDAHGTRTVRESRAETGRRGRERDDQPDVVLANAADRNRSHGEDSDDHWRGNAGTRGYDRNVERTSERESRRVRHGGGIERDPDSGMASPHRGDRTDRNDRQGGHSGRRSTARGSTASPRRPSGSRRGDNGEDQFSVGDR-GHQYSSFGDVEGQRWGGGERVKAMQRDRRDEDMQQMTREKDTVERQLQQQQQEAAEKARELETKVLKLEASLASSTSREDLLRRELADAARREGFAQEKHERALSEQERKAASLKEKLAEAASKTSEISVAGVAEQEKEEGLRLEVKNALKRAEAAEGALARKEEAEKVSAERESEVPRLQLLLA 2961
MAPAGDDDE+LPTTK AEDGAPPESEEDYVEAVTRHAKYLGMDPERDGAYMWIAEEAL+AEVPEGWVTGEGEGEYEGLVYYYNEATGESTWDHPLDEYYREK KRKKARRAAREKE+KGNRQDSKSRAXXXXXXXXXXX XXXXXX EK GSSNGVANGDQGSQSSGHRD+AKRSKTRK SRR XXXXSTSSR QR DN GDGR SGRAH XXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXX GESDRSK DEPPE RE Q+D N+VDMPAVHH+V GRS+TQASPAAWKNNDMEEIDFEDELRDMEEGDGDPNVRHESPT+MEAPDAEPQ RSS + GVG DTKNQGEPLSSPPMSK AAIA+DDKARRS RDHPNKA KANKLGNEDE HSRR +SGERG+ SRESGLPSAAG ADRDL+DWPEVA NPA+ED SG S KEQKGK+YS AHGTRT RESRAETGRRGRERDDQPDVV ANAADRNRS+GEDSDDHWRGN TRGYDRNVERTSERESRR+RHGGGIERD DSGMASP RGDRTDRND QGGHSGRR TA+G+TA PRRPSGS GD+G DQ+S GDR HQYSSFGD+EGQRWGGGERV AMQR RRDEDMQQMTREKD VERQLQQQQQ+AA+KARELE KVLKLEASLASSTSREDLLRRELADAARREG AQEKH RALSEQER A SLKEKLAEAASKT E+SVAGVA +EKEEGLRLE+KNALK+AE AEGALARK SAERES+VPRL+LLLA
Sbjct: 1 MAPAGDDDEQLPTTKGAEDGAPPESEEDYVEAVTRHAKYLGMDPERDGAYMWIAEEALSAEVPEGWVTGEGEGEYEGLVYYYNEATGESTWDHPLDEYYREKLKRKKARRAAREKEEKGNRQDSKSRAXXXXXXXXXXXSSRRHRSGDDMENDERSEXXXXXXXTTEKHGSSNGVANGDQGSQSSGHRDNAKRSKTRKDSRRXXXXXXXXXXXSTSSRTQRDDN-GDGRXXXXXXXXXXXXXXXXXXSGRAHRXXXXXXXXXXKEEGRRRRGSXXXXXXXXXXXXXXXXXXXXXXXXGGGESDRSKPDEPPEGRET----------------------------------------------------------------------------------------------------------------------------------------------------------QEDRGNRVDMPAVHHSVDGRSSTQASPAAWKNNDMEEIDFEDELRDMEEGDGDPNVRHESPTEMEAPDAEPQGRSSPAVSGVGIDTKNQGEPLSSPPMSKAAAIAMDDKARRSSPRDHPNKASKANKLGNEDETHSRRDTSGERGINSRESGLPSAAGKADRDLDDWPEVAGNPAKEDASGDSAKEQKGKQYSSAHGTRTERESRAETGRRGRERDDQPDVVFANAADRNRSYGEDSDDHWRGNGATRGYDRNVERTSERESRRLRHGGGIERDRDSGMASPRRGDRTDRNDGQGGHSGRRPTAKGNTAGPRRPSGSLGGDHGADQYSSGDRWDHQYSSFGDIEGQRWGGGERVTAMQRHRRDEDMQQMTREKDKVERQLQQQQQDAAKKARELENKVLKLEASLASSTSREDLLRRELADAARREGVAQEKHARALSEQERNATSLKEKLAEAASKTREMSVAGVAGKEKEEGLRLELKNALKKAEDAEGALARKXXXXXXSAERESDVPRLRLLLA 833
BLAST of mRNA_Ecto-sp13_S_contig1277.2293.1 vs. uniprot
Match: A0A836CDQ8_9STRA (WW domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDQ8_9STRA) HSP 1 Score: 112 bits (281), Expect = 1.730e-21 Identity = 47/75 (62.67%), Postives = 65/75 (86.67%), Query Frame = 1
Query: 85 YVEAVTRHAKYLGMDPERDGAYMWIAEEALNAEVPEGWVTGEGEGEYEGLVYYYNEATGESTWDHPLDEYYREKF 309
+ E+V RHAK+LG+DP D Y+W+A EAL+A++PEGWV+GEGEGEYEGL++Y+NEAT STW+HPLD++Y++ F
Sbjct: 66 HYESVLRHAKFLGIDPVEDKEYLWLAAEALDADLPEGWVSGEGEGEYEGLLFYFNEATETSTWEHPLDQHYKKVF 140
BLAST of mRNA_Ecto-sp13_S_contig1277.2293.1 vs. uniprot
Match: L1JFH0_GUITC (WW domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JFH0_GUITC) HSP 1 Score: 85.1 bits (209), Expect = 6.780e-16 Identity = 45/90 (50.00%), Postives = 55/90 (61.11%), Query Frame = 1
Query: 67 PESEEDYVEAVTRHAKYLGMDPERDGAYMWIAEEALNAEVPEGWV---TGEGEGEYEGLVYYYNEATGESTWDHPLDEYYREKFKRKKAR 327
PE E + + +AK+LGMDP+ D A WIA E L A +PE W TG+ E +YY+N ATGES WDHP DEYYR FK +K R
Sbjct: 25 PEDYEPTEDEILEYAKWLGMDPDEDKALFWIAREGLKAPLPENWKPCKTGDDE------IYYFNFATGESVWDHPCDEYYRNLFKDEKDR 108
BLAST of mRNA_Ecto-sp13_S_contig1277.2293.1 vs. uniprot
Match: L1IF62_GUITC (WW domain-containing protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IF62_GUITC) HSP 1 Score: 76.3 bits (186), Expect = 3.510e-13 Identity = 36/74 (48.65%), Postives = 48/74 (64.86%), Query Frame = 1
Query: 88 VEAVTRHAKYLGMDPERDGAYMWIAEEALNAEVPEGWVTGEGEGEYEGLVYYYNEATGESTWDHPLDEYYREKF 309
+ + +A+Y+GMDP D +WIAEEAL A +PEGW + G V+YYN +G S+W+HPLDEYYR F
Sbjct: 20 AQEIVDYARYIGMDPIGDVNLLWIAEEALCAALPEGWSE---HTDANGNVFYYNSVSGVSSWEHPLDEYYRSLF 90
BLAST of mRNA_Ecto-sp13_S_contig1277.2293.1 vs. uniprot
Match: A0A7S0VXG9_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VXG9_9CRYP) HSP 1 Score: 76.6 bits (187), Expect = 4.390e-13 Identity = 36/74 (48.65%), Postives = 48/74 (64.86%), Query Frame = 1
Query: 88 VEAVTRHAKYLGMDPERDGAYMWIAEEALNAEVPEGWVTGEGEGEYEGLVYYYNEATGESTWDHPLDEYYREKF 309
+ + +A+Y+G+DP D +WIAEEAL A +PEGW + G V+YYN TG S+W+HPLDEYYR F
Sbjct: 9 AQEIVDYARYIGIDPIADVNLLWIAEEALCASLPEGWTEHH---DAAGNVFYYNTITGVSSWEHPLDEYYRSLF 79
BLAST of mRNA_Ecto-sp13_S_contig1277.2293.1 vs. uniprot
Match: A0A7S1E7J0_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1E7J0_HEMAN) HSP 1 Score: 77.8 bits (190), Expect = 6.550e-13 Identity = 41/81 (50.62%), Postives = 49/81 (60.49%), Query Frame = 1
Query: 67 PESEEDYVEAVTRHAKYLGMDPERDGAYMWIAEEALNAEVPEGWV---TGEGEGEYEGLVYYYNEATGESTWDHPLDEYYR 300
P++ E E + +AK+LGMD E D WIA E L A +PE W TGE E +YY+N ATGES WDHP DEYYR
Sbjct: 55 PDNYEPTQEEILEYAKWLGMDLENDKDLFWIAREGLKAPLPENWKPCKTGEDE------IYYFNFATGESVWDHPCDEYYR 129
BLAST of mRNA_Ecto-sp13_S_contig1277.2293.1 vs. uniprot
Match: D7FVQ3_ECTSI (WW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVQ3_ECTSI) HSP 1 Score: 77.4 bits (189), Expect = 6.580e-13 Identity = 44/104 (42.31%), Postives = 62/104 (59.62%), Query Frame = 1
Query: 52 EDGAPPESEEDYVE------------AVTRHAKYLGMDPERDGAYMWIAEEALNAEVPEGWVTGEGEGEYEGLVYYYNEATGESTWDHPLDEYYREKFKRKKAR 327
EDG+P ED E V HA LGM D ++WIAEE+L A +PEGW+ + + E G YYYN+A+G+S+W+HP D +Y+E +++KKAR
Sbjct: 34 EDGSPDHLREDNTEEPKSVPADVFKQGVQEHAIMLGMLLPEDENFLWIAEESLLAPLPEGWL--QLKDEQSGHPYYYNQASGDSSWEHPRDSFYKEIYRQKKAR 135
BLAST of mRNA_Ecto-sp13_S_contig1277.2293.1 vs. uniprot
Match: A0A6G0XDS6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XDS6_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 1.130e-12 Identity = 43/89 (48.31%), Postives = 56/89 (62.92%), Query Frame = 1
Query: 85 YVEAVTRHAKYLGMDPERDGAYMWIAEEALNAEVPEGW---VTGEGEGEYEGLVYYYNEATGESTWDHPLDEYYREKFKRKKARRAARE 342
++E V HAKYLGM+P+RD ++WIA E+L A VP GW VT EG YYYN+ TGES W+HP D Y + F++ K + A E
Sbjct: 110 FMEGVKEHAKYLGMNPQRDAEFLWIARESLVAPVPSGWHQVVT------KEGAPYYYNDHTGESRWEHPCDRVYMDLFQQVKRMKEAGE 192
BLAST of mRNA_Ecto-sp13_S_contig1277.2293.1 vs. uniprot
Match: A0A7S3G3G0_9EUKA (Hypothetical protein n=2 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3G3G0_9EUKA) HSP 1 Score: 80.9 bits (198), Expect = 2.770e-12 Identity = 43/78 (55.13%), Postives = 51/78 (65.38%), Query Frame = 1
Query: 97 VTRHAKYLGMDPERDGAYMWIAEEALNAEVPEGWVTGEGEGEY---EGLVYYYNEATGESTWDHPLDEYYREKFKRKK 321
V AKYLGMD ERD +WIAEE L AE+P+GW GEY +G YYYN T +S W+HPLD+ YRE +KR K
Sbjct: 45 VLNFAKYLGMDVERDRDLLWIAEEGLIAELPDGW------GEYTDEKGRPYYYNHRTDKSQWEHPLDKEYRELYKRMK 116 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1277.2293.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1277.2293.1 >prot_Ecto-sp13_S_contig1277.2293.1 ID=prot_Ecto-sp13_S_contig1277.2293.1|Name=mRNA_Ecto-sp13_S_contig1277.2293.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=987bp MAPAGDDDEKLPTTKEAEDGAPPESEEDYVEAVTRHAKYLGMDPERDGAYback to top mRNA from alignment at Ecto-sp13_S_contig1277:11769..18058+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1277.2293.1 ID=mRNA_Ecto-sp13_S_contig1277.2293.1|Name=mRNA_Ecto-sp13_S_contig1277.2293.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6290bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1277:11769..18058+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1277:11769..18058+ >mRNA_Ecto-sp13_S_contig1277.2293.1 ID=mRNA_Ecto-sp13_S_contig1277.2293.1|Name=mRNA_Ecto-sp13_S_contig1277.2293.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2961bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1277:11769..18058+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |