prot_Ecto-sp13_S_contig10208.229.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10208.229.1
Unique Nameprot_Ecto-sp13_S_contig10208.229.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length341
Homology
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BLAST of mRNA_Ecto-sp13_S_contig10208.229.1 vs. uniprot
Match: D8LT37_ECTSI (C2H2 zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT37_ECTSI)

HSP 1 Score: 598 bits (1541), Expect = 5.070e-211
Identity = 318/340 (93.53%), Postives = 326/340 (95.88%), Query Frame = 0 
Query:    1 VSELLRLISEANLDAFSRHSLEDRANAARNLQAAEVRRMLDLKLSHAAAVNGGACKDEGLKTLNEREATAWAAKLRLKAALNMDRHYASLEPGGLPASLRRRNPTSSHPSDFLDDGTPATPQGAMQTFGRACPPEDNETGAIRHWKRGATETEEVLDLRRDVREWQSSCGRRARFSYLCERWVGVASDIEEKQRQKRMIEAAEGEKRMKERHAAKLLRKRQLAELRANAGSRATGEERRKVERDKEAEERKRLEGEELERMSREEGAQLAGGDRYWGLIRELHRLRAIEEERRRAWEVRIRATKEKMVAVRCISELSDFTHATPPIDPELQRQIDRLLEM 340
            VSELLRLISEANLDAFSRHSLEDRA AA+NLQ  +VRRMLDLKLSH+AAVN GACKDEGLK LNEREATAWAAKL+LKAALNMDRHYASLEPGGLPASLRRRNPTSS PSDFLDDGTPATPQGAMQTFGRACPPEDNE+GAIR WKRGA ETEEVLDLRRDVREWQSSCGRRARFS LCERWVGVASDIEEKQRQKRMIEAAE EKRM+ER AAKLLRKRQLAELRANAGSRATGEERRKVERDKEAEERKRLEGEELERMSREE AQLAGGDRYWGLIREL RLR IEEERRRAWEVRIRATKEKMVAVRCISELSDFTHATPPIDPELQ+QIDRLLE+
Sbjct:  230 VSELLRLISEANLDAFSRHSLEDRAMAAQNLQVVDVRRMLDLKLSHSAAVNSGACKDEGLKRLNEREATAWAAKLKLKAALNMDRHYASLEPGGLPASLRRRNPTSSQPSDFLDDGTPATPQGAMQTFGRACPPEDNESGAIRLWKRGAKETEEVLDLRRDVREWQSSCGRRARFSDLCERWVGVASDIEEKQRQKRMIEAAEREKRMRERQAAKLLRKRQLAELRANAGSRATGEERRKVERDKEAEERKRLEGEELERMSREEAAQLAGGDRYWGLIRELQRLRVIEEERRRAWEVRIRATKEKMVAVRCISELSDFTHATPPIDPELQQQIDRLLEI 569
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10208.229.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LT37_ECTSI5.070e-21193.53C2H2 zinc finger protein n=1 Tax=Ectocarpus silicu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 199..219
NoneNo IPR availableCOILSCoilCoilcoord: 244..264

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10208contigEcto-sp13_S_contig10208:18..3642 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10208.229.1mRNA_Ecto-sp13_S_contig10208.229.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10208 18..3642 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10208.229.1 ID=prot_Ecto-sp13_S_contig10208.229.1|Name=mRNA_Ecto-sp13_S_contig10208.229.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=341bp
VSELLRLISEANLDAFSRHSLEDRANAARNLQAAEVRRMLDLKLSHAAAV
NGGACKDEGLKTLNEREATAWAAKLRLKAALNMDRHYASLEPGGLPASLR
RRNPTSSHPSDFLDDGTPATPQGAMQTFGRACPPEDNETGAIRHWKRGAT
ETEEVLDLRRDVREWQSSCGRRARFSYLCERWVGVASDIEEKQRQKRMIE
AAEGEKRMKERHAAKLLRKRQLAELRANAGSRATGEERRKVERDKEAEER
KRLEGEELERMSREEGAQLAGGDRYWGLIRELHRLRAIEEERRRAWEVRI
RATKEKMVAVRCISELSDFTHATPPIDPELQRQIDRLLEM*
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