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Homology
BLAST of mRNA_Ecto-sp13_S_contig12759.2285.1 vs. uniprot
Match: A0A6H5KUL3_9PHAE (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KUL3_9PHAE) HSP 1 Score: 491 bits (1264), Expect = 5.420e-172 Identity = 245/259 (94.59%), Postives = 254/259 (98.07%), Query Frame = 1
Query: 1 QAEVEKFITADPLTPCVIGFYDEDTDGADVMNYRTAAQRMSQIGVRFGLATEDDILEGLKYKSGRVMAYPAKRFLEDGDRPKQRYPGSGALDPESLQIWVVKVVTPLVGLFTWENGGLYQEIGLPELTAYTKVDLEEDGEHFDAVAATLRKVASAKLPEKRLSYVVANKEDMSSLASRFQFPEPEGEEAPEAVTVGIRTENKFYRMDGKFDEKTVAEFVDAYLNGSLKPTHVEAVDEGMGSAGAGDEIDDEDSDVVVVS 777
AEVEKFITADPLTPCVIGF+DEDTDGADVMNYRTAAQRMSQ GVRFGLATE+DILEGLKYKSGRVMAYPAKRFLEDG RPKQRYPGSGALDPESLQIWVVKVVTPLVGLFTWENGGLYQEIGLPELTAYTKVDLEEDGEHFDAVAATLRKVASA+LPEKRLSYVVANKED+ SLASRFQFPEPEGEEAPEAVTVGIR+ENKFYRMDGKFDEKTVAEFVDAYLNGSLKPTHVEA+DEGMGS+GAGDEIDDEDSDVV ++
Sbjct: 88 MAEVEKFITADPLTPCVIGFFDEDTDGADVMNYRTAAQRMSQTGVRFGLATEEDILEGLKYKSGRVMAYPAKRFLEDGGRPKQRYPGSGALDPESLQIWVVKVVTPLVGLFTWENGGLYQEIGLPELTAYTKVDLEEDGEHFDAVAATLRKVASARLPEKRLSYVVANKEDVVSLASRFQFPEPEGEEAPEAVTVGIRSENKFYRMDGKFDEKTVAEFVDAYLNGSLKPTHVEAMDEGMGSSGAGDEIDDEDSDVVALT 346
BLAST of mRNA_Ecto-sp13_S_contig12759.2285.1 vs. uniprot
Match: A0A7R9UDA9_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UDA9_9STRA) HSP 1 Score: 103 bits (258), Expect = 1.750e-22 Identity = 73/234 (31.20%), Postives = 118/234 (50.43%), Query Frame = 1
Query: 1 QAEVEKFITAD--PLTPCVIGFYDEDTDGADVMNYRTAAQRMSQIGVRFGLATEDDILEGLKYKSGRVMAY-PAKRFLEDGDRPKQRYPGSGALDPESLQIWVVKVVTPLVGLFTWENGGLYQEIGLPELTAYTKVDLEEDGEHFDAVAATLRKVASAKLPEKRLSYVVANKEDMSSLASRFQFPEPEGEEAPEAVTVGIRTENKFYRM--DGKFDEKTVAEFVDAYLNGSLKP 687
+ +E F+ A+ P V+ + ED + AD+ + A+ +Q +F L ++ D++E Y + Y P+ DR + RYPG P SL+ W+ K LVGL +WE LY+++ LP + +TKVD + + + +D A LRKVA + + S+V+AN +D S A F + E + ++ VG+R + Y M DGKF V F+ ++G L P
Sbjct: 74 EEALEAFLAANNNEAYPAVVAYIAEDAE-ADLELFTQVAEE-NQYSYKFALVSDRDMMETRNYDQLAITVYKPSLDVHPKYDRHRSRYPGRDVSLP-SLERWLAKNAVALVGLRSWETASLYEQLNLPMVMLFTKVDRQRNKKQYDYYANRLRKVAQDY--KGKYSFVIANMDDYKSDAQEFGWSEEDIDQVK--ALVGVRDGKERYPMPADGKFSTDAVKAFMQELVDGKLAP 300
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Stop | 0 |
| Start | 0 |
| Seed ortholog score | 486.9 |
| Seed ortholog evalue | 5.9e-135 |
| Seed eggNOG ortholog | 2880.D8LM96 |
| Preferred name | PDIA3 |
| Model size | 777 |
| KEGG ko | ko:K08056 |
| KEGG Pathway | ko04141,ko04612,map04141,map04612 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000003,GO:0001666,GO:0001669,GO:0002376,GO:0002474,GO:0002478,GO:0002479,GO:0002931,GO:0003006,GO:0003674,GO:0003756,GO:0003810,GO:0003824,GO:0004175,GO:0004197,GO:0004620,GO:0004629,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005740,GO:0005758,GO:0005768,GO:0005783,GO:0005788,GO:0005789,GO:0005790,GO:0005886,GO:0006457,GO:0006464,GO:0006508,GO:0006807,GO:0006950,GO:0007154,GO:0007275,GO:0007423,GO:0007548,GO:0007584,GO:0007610,GO:0007623,GO:0008081,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0008360,GO:0009605,GO:0009628,GO:0009636,GO:0009653,GO:0009719,GO:0009725,GO:0009887,GO:0009966,GO:0009967,GO:0009986,GO:0009987,GO:0009991,GO:0010008,GO:0010033,GO:0010171,GO:0010646,GO:0010647,GO:0010941,GO:0010942,GO:0012505,GO:0014070,GO:0015036,GO:0015037,GO:0016020,GO:0016021,GO:0016298,GO:0016324,GO:0016491,GO:0016667,GO:0016671,GO:0016740,GO:0016746,GO:0016755,GO:0016787,GO:0016788,GO:0016853,GO:0016860,GO:0016864,GO:0018149,GO:0018991,GO:0019098,GO:0019153,GO:0019538,GO:0019882,GO:0019884,GO:0022414,GO:0022603,GO:0022604,GO:0023051,GO:0023056,GO:0030139,GO:0030141,GO:0030176,GO:0030539,GO:0031090,GO:0031224,GO:0031227,GO:0031410,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0031967,GO:0031970,GO:0031974,GO:0031975,GO:0031982,GO:0031984,GO:0032501,GO:0032502,GO:0032504,GO:0032991,GO:0033273,GO:0033280,GO:0033554,GO:0033594,GO:0033595,GO:0033993,GO:0034975,GO:0034976,GO:0035112,GO:0036211,GO:0036293,GO:0036296,GO:0040002,GO:0040019,GO:0042175,GO:0042221,GO:0042287,GO:0042288,GO:0042335,GO:0042493,GO:0042578,GO:0042590,GO:0042802,GO:0042824,GO:0042825,GO:0042981,GO:0043065,GO:0043067,GO:0043068,GO:0043170,GO:0043209,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044321,GO:0044421,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044432,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0045138,GO:0045177,GO:0045335,GO:0045471,GO:0045995,GO:0046661,GO:0046677,GO:0048002,GO:0048511,GO:0048513,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0048608,GO:0048609,GO:0048731,GO:0048806,GO:0048808,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051128,GO:0051239,GO:0051240,GO:0051716,GO:0055037,GO:0055038,GO:0055093,GO:0055114,GO:0061458,GO:0065007,GO:0065008,GO:0070011,GO:0070013,GO:0070482,GO:0070848,GO:0070887,GO:0071295,GO:0071305,GO:0071310,GO:0071363,GO:0071396,GO:0071407,GO:0071495,GO:0071496,GO:0071559,GO:0071560,GO:0071704,GO:0071944,GO:0080058,GO:0080184,GO:0090596,GO:0090597,GO:0090598,GO:0097223,GO:0097305,GO:0097327,GO:0097708,GO:0098588,GO:0098590,GO:0098796,GO:0098805,GO:0098827,GO:0099503,GO:0140096,GO:1901423,GO:1901564,GO:1901654,GO:1901700,GO:1901701,GO:1903332,GO:1903334,GO:1904147,GO:1904148,GO:2000026,GO:2001233,GO:2001235,GO:2001236,GO:2001238 |
| Exons | 6 |
| EggNOG free text desc. | intramolecular oxidoreductase activity, transposing S-S bonds |
| EggNOG OGs | COG0526@1,KOG0190@2759 |
| Ec32 ortholog description | Protein Disulfide Isomerase (putive Transglutaminase bifunctional protein) |
| Ec32 ortholog | Ec-05_001990.1 |
| EC | 5.3.4.1 |
| Cds size | 777 |
| COG Functional cat. | CO |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko01000,ko03110,ko04131,ko04147 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1681462682.4077504-CDS-Ecto-sp13_S_contig12759:878..962 | 1681462682.4077504-CDS-Ecto-sp13_S_contig12759:878..962 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig12759 879..962 + |
| 1681462682.417953-CDS-Ecto-sp13_S_contig12759:1597..1772 | 1681462682.417953-CDS-Ecto-sp13_S_contig12759:1597..1772 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig12759 1598..1772 + |
| 1681462682.4281976-CDS-Ecto-sp13_S_contig12759:2125..2262 | 1681462682.4281976-CDS-Ecto-sp13_S_contig12759:2125..2262 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig12759 2126..2262 + |
| 1681462682.4378574-CDS-Ecto-sp13_S_contig12759:2515..2659 | 1681462682.4378574-CDS-Ecto-sp13_S_contig12759:2515..2659 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig12759 2516..2659 + |
| 1681462682.448343-CDS-Ecto-sp13_S_contig12759:3555..3699 | 1681462682.448343-CDS-Ecto-sp13_S_contig12759:3555..3699 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig12759 3556..3699 + |
| 1681462682.4594324-CDS-Ecto-sp13_S_contig12759:4407..4500 | 1681462682.4594324-CDS-Ecto-sp13_S_contig12759:4407..4500 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig12759 4408..4500 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig12759.2285.1 >prot_Ecto-sp13_S_contig12759.2285.1 ID=prot_Ecto-sp13_S_contig12759.2285.1|Name=mRNA_Ecto-sp13_S_contig12759.2285.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=259bp
QAEVEKFITADPLTPCVIGFYDEDTDGADVMNYRTAAQRMSQIGVRFGLA TEDDILEGLKYKSGRVMAYPAKRFLEDGDRPKQRYPGSGALDPESLQIWV VKVVTPLVGLFTWENGGLYQEIGLPELTAYTKVDLEEDGEHFDAVAATLR KVASAKLPEKRLSYVVANKEDMSSLASRFQFPEPEGEEAPEAVTVGIRTE NKFYRMDGKFDEKTVAEFVDAYLNGSLKPTHVEAVDEGMGSAGAGDEIDD EDSDVVVVS back to topmRNA from alignment at Ecto-sp13_S_contig12759:879..4500+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp13_S_contig12759.2285.1 ID=mRNA_Ecto-sp13_S_contig12759.2285.1|Name=mRNA_Ecto-sp13_S_contig12759.2285.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3622bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12759:879..4500+ (Ectocarpus species13 EcNAP12_S_4_19m) CAGGCTGAAGTGGAGAAGTTCATCACCGCCGACCCGCTAACGCCATGCGT
GATCGGGTTCTACGACGAAGACACGGACGGCGCTGTGAGTACCTCGTCGC
TATCCTTGTGCGCCTGCGCGTTCGCCTTATGTGCTCGTGTGTGTGTGCGT
TTTTATCCTGGGTTCGAGTCGCAGGAATCAGGCCGTGACAGGCGGCGGTT
CTGTTGGTAGTTTGTTGTTTGTCTTGGGGCGGTTTTATTTCCGACGTTGC
TGTGACGAGAGCTCATGCATGATACGAGTCTCAAGGAGCACAACCCAGAC
GCTAGCGGATGTTGTAGGTGCCGACGCCGTTGACCAAAACCGGCCTTGCG
GTGCCCCGTTGGAAAGGTTGGGCGAACGCATGGCAAGCCGTCCAACACCT
TTTCGTTTTTCAAAGGCGTGGGAGGATGGTGGCTTTGGGTGTAAGGTCGT
GGTTTTTCGTGTAACCCCCTGTTCATTACCCTAGGAAAAACCTTGAGGCC
CTACCTCTCTCTCTCTTGTCTCCCTCCAATTTCTGGTTTCGGTTCCATCC
TTTCGTGTTTTTGTTTTTTTCTCTCTTGCGATCAGCTCCAGCTTGCTGAC
GCCGCCGCTCCCGCTCCCACCATCGCAACCCGCTGCCACTTATAGGTCCT
TGCTTGCCTCTTGCTTCACCACATTTCACCTTGTTGCCCTCTGTCGTGGG
CGGTACCTACGTTTGCCAGGACGTCATGAATTACAGGACCGCAGCGCAGA
GAATGTCGCAGATTGGAGTCCGGTTCGGTCTCGCGACGGAGGACGACATC
CTAGAGGGGCTCAAGTACAAGTCCGGCCGCGTGATGGCCTACCCCGCGAA
GCGCTTCCTGGAGGACGGCGACCGGCCAAAGCAGCGGTACCCGGGTGAGA
GGGGCGCTGCCGTATTCCCCTTGTCGGGGTTTGGAAGGTCAAGGAAAAGT
TGTTTTTTCCTGTGTCGCATCTGTTATTGTTGTTGTGGTGGTGCTGCTGC
TGCTGTTGCTGCTGCGGTGGTGGTTGTGTTGTCAGCATCGGTGCGGTTGG
CTTGTCATCTATGTCTGTGCTGGGATGTTACCCAGTTGAGTGTCTTCACG
GTGTTGCATTCGCGCTCAAACCAGAGGGTGACGAATCGGATTCCTGTGTT
TTGAGGATAAACAGCAAATATTGGTGCGCGAACAGACCAACATCTCAGAC
ACTGTCCCTAAGGCCTCCGCACGTCTCATCGGATTTGTTTTTTACAGGCA
GCGGCGCTCTCGACCCAGAGTCGCTTCAAATTTGGGTGGTTAAGGTCGTG
ACTCCCCTGGTTGGCCTCTTCACCTGGGAAAATGGTGGGCTGTACCAGGA
GATCGGCTTGCCGGAGCTGACGGCGTACACGAAGGTGGGTGGAGGTCGTT
TTATGGCCAGGCTTTGCTGCAAGGGGTCGGGTTGCCCGGTGCTTGCTGGT
CTCGTCTCCACCTGCTTTAGTACACGGTCGTCCCTGCCTTTGGGAAACCC
TGATTACTTACAGTGGCAATACGTCCAGCGGCTTGTGAAGCCACCCTCTC
CCGACACGACCTGGACCCACCGCTCTGCTGCTGATGATGATGATGATGAT
TCTGCTGCTACTGCTACTGCTGCTGCCGCCGCCGCAGGTTGACTTGGAAG
AGGACGGCGAGCACTTCGACGCTGTCGCAGCCACACTCCGCAAGGTGGCA
TCGGCGAAGCTCCCGGAGAAGAGGCTGTCGTACGTCGTCGCCAACAAGGA
GGACATGTCCTCCCTGGCCTCAAGGTTTCAGGTGAAACGAATGGACGTTG
TGTTTGTGTGTGTGTTCTGCCTTCATGCAAGAAATAGCGTGTGTTGTCTG
GGCAGTCAGTTCCCTTGCTATGAAGGCGACGGTGATACTACCTGGGCACG
CTCAATCAACTAGAGAGCTGCATTAGCCAATGGTAACTTGGGCGACTTGG
CGGACGTGCGCTGCCATTACCAGTGTCGGGTGTCGTTCGTCTCCTGGTGT
TTTGAAGCTGTGGGTCAAGGACCAGCAGGCACGACAGCAACACACCACAA
TCCTCCCCCCAGTAGCGGCATAAACAATCGTGTTTTTCTCGGCGGCGGGT
GAGGGAGAGGGCTAGGGTAACACGGCTCTTCTAGCCGGCGAAGGGGGGCG
GGGCGGGGCGGGCCGGGTTGGTGGTCGAGACCGGAATGCCTGTTCTCGAC
GGCAACGCGCAGTACCTCGAGGAATCCCAGAACGACCACGCCTTTAGCAT
GAGGGTGCTGACTTGACCACTGCCTGGCTCGTTGCTAGATTCCGTCGTGT
GGTGTCGGGGTGGTTGCTGCTGTGGCCCGCGTAGCTGCTCGCCCTGCAAA
GCGGGCCGATTGGCTGTTGTTGCTGAAGAGTGTGGTTTGTGTCGTCCGTG
ATGCCGGTGCTGCAGCTGCAAAGCATGTAAAGTGGCTCTTCCCGTTGTTG
TTGTTGTTGTTGTTGTTGCTGCTGTCATTGTTGCCAGCGTGAGCGGTTGT
TTTGTGTGCGGCTTCCCGAGCGGGCTGGTGAGGGCCCCAGAGGAAGAAGT
CTACCCTTCATGCGGTATTGGACTCCGCCGCTCGAGAAAATGTTTGTCGC
TGTTCTCTCCACGACGGCTTTCTTCGTTGTTGTGTTGTCCGTGTGTGGGT
GGGTCGCGTGTTTTGTCTCGGCTGCAGTTCCCTGAACCCGAGGGCGAGGA
GGCTCCCGAGGCCGTTACCGTTGGCATCCGCACGGAGAACAAGTTCTACC
GCATGGACGGGAAGTTCGACGAGAAGACGGTGGCCGAGTTCGTCGATGCG
TACCTCAACGGGTCGCTCAAGGTGTGTCTCCTCCCTCCCTGCTATTCTCC
CTCTGTCACTGGAAACGTCCGGTGATGAAGCTATGGTTGAGTCTCTTGTC
TCTTGTCTAGGTGTGGTGTGGCTGGTATTCTCGTTTTTGCCTGCCGCTCG
TGTTTATTCTTTGAGGGCGTGGGGAACTGTACCCACCAGTAGATTTGCTG
TCGTGTGTGGTCGAACACAAAGATACGGTCCACCTAACGATATATATCCA
AACTACGGGTCCCTGTAGGCTTTTGTACAGACATAACTACGCATGACTAC
GGTTGACCAATTTCCCCAGCGTGGCCACTGGTTTTCTGCGCCCTGCCGTT
TCCCGTTCTCGACGAGAAGCCCTGCTCCTTTGGCTGTCGTGTTGTGCTTG
ACACGCACGTTGAAGCCGGGCTTTTCATCGTGGGTTGTACTCCTAGTTAC
GCGTTCTCCGGAAATTACCACATTGGGGGCCGCCTCCCGGCACAGAACGT
AGCACCCACGAAGTCAGCGAGGTTAACACAGCGTCTTGACTCCTTAGCTT
CCCAAATTTGCTGCTGTACAGCGCGGAACCCCGCCATTCTACCTTCCAAG
GCGCTGCCTGATTGTTTTCCGGCATCTGCACCCGGTAGACTTACCACACG
CGATGGTGCACCCCTGCTTCCACCTGTGTGAGTGCCCTGACTGTTTGCCC
CCTGCACGCATGACGTTCCCTCCGTGCAGCCGACGCACGTAGAAGCGGTG
GACGAGGGTATGGGGTCTGCCGGGGCCGGCGACGAAATAGATGACGAAGA
TAGCGACGTCGTGGTGGTGAGT back to topCoding sequence (CDS) from alignment at Ecto-sp13_S_contig12759:879..4500+ >mRNA_Ecto-sp13_S_contig12759.2285.1 ID=mRNA_Ecto-sp13_S_contig12759.2285.1|Name=mRNA_Ecto-sp13_S_contig12759.2285.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=777bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12759:879..4500+ (Ectocarpus species13 EcNAP12_S_4_19m) CAGGCTGAAGTGGAGAAGTTCATCACCGCCGACCCGCTAACGCCATGCGT GATCGGGTTCTACGACGAAGACACGGACGGCGCTGACGTCATGAATTACA GGACCGCAGCGCAGAGAATGTCGCAGATTGGAGTCCGGTTCGGTCTCGCG ACGGAGGACGACATCCTAGAGGGGCTCAAGTACAAGTCCGGCCGCGTGAT GGCCTACCCCGCGAAGCGCTTCCTGGAGGACGGCGACCGGCCAAAGCAGC GGTACCCGGGCAGCGGCGCTCTCGACCCAGAGTCGCTTCAAATTTGGGTG GTTAAGGTCGTGACTCCCCTGGTTGGCCTCTTCACCTGGGAAAATGGTGG GCTGTACCAGGAGATCGGCTTGCCGGAGCTGACGGCGTACACGAAGGTTG ACTTGGAAGAGGACGGCGAGCACTTCGACGCTGTCGCAGCCACACTCCGC AAGGTGGCATCGGCGAAGCTCCCGGAGAAGAGGCTGTCGTACGTCGTCGC CAACAAGGAGGACATGTCCTCCCTGGCCTCAAGGTTTCAGTTCCCTGAAC CCGAGGGCGAGGAGGCTCCCGAGGCCGTTACCGTTGGCATCCGCACGGAG AACAAGTTCTACCGCATGGACGGGAAGTTCGACGAGAAGACGGTGGCCGA GTTCGTCGATGCGTACCTCAACGGGTCGCTCAAGCCGACGCACGTAGAAG CGGTGGACGAGGGTATGGGGTCTGCCGGGGCCGGCGACGAAATAGATGAC GAAGATAGCGACGTCGTGGTGGTGAGT back to top
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