mRNA_Ecto-sp13_S_contig12753.2283.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig12753.2283.1 vs. uniprot
Match: A0A6H5JD30_9PHAE (Tyrosinase_Cu-bd domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD30_9PHAE) HSP 1 Score: 182 bits (462), Expect = 1.830e-56 Identity = 87/89 (97.75%), Postives = 88/89 (98.88%), Query Frame = 1
Query: 1 RREIRDLTDRDREAFLDAMQIWYTVPTDVGKARYGPSFSNYQVITAYHNADVENFCYHIGLQFLTSHAAFDLTMERYLQMIDPSVSLPM 267
RREIRDLT+RDREAFLDAMQIWYTVPTDVGKARYGPSFSNYQ ITAYHNADVENFCYHIGLQFLTSHAAFDLTMERYLQMIDPSVSLPM
Sbjct: 13 RREIRDLTERDREAFLDAMQIWYTVPTDVGKARYGPSFSNYQAITAYHNADVENFCYHIGLQFLTSHAAFDLTMERYLQMIDPSVSLPM 101
BLAST of mRNA_Ecto-sp13_S_contig12753.2283.1 vs. uniprot
Match: D7FP10_ECTSI (TYRosinase family member (Tyr-3) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP10_ECTSI) HSP 1 Score: 179 bits (454), Expect = 1.870e-51 Identity = 86/89 (96.63%), Postives = 87/89 (97.75%), Query Frame = 1
Query: 1 RREIRDLTDRDREAFLDAMQIWYTVPTDVGKARYGPSFSNYQVITAYHNADVENFCYHIGLQFLTSHAAFDLTMERYLQMIDPSVSLPM 267
RREIRDLTDRDREAFLDAM IWYT+PTDVGK RYGPSFSNYQVITAYHNADVENFCYHIGLQFLTSHAAFDLTMERYLQMIDPSVSLPM
Sbjct: 137 RREIRDLTDRDREAFLDAMLIWYTLPTDVGKDRYGPSFSNYQVITAYHNADVENFCYHIGLQFLTSHAAFDLTMERYLQMIDPSVSLPM 225
BLAST of mRNA_Ecto-sp13_S_contig12753.2283.1 vs. uniprot
Match: A0A6H5K6J7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6J7_9PHAE) HSP 1 Score: 144 bits (362), Expect = 2.930e-42 Identity = 68/88 (77.27%), Postives = 76/88 (86.36%), Query Frame = 1
Query: 1 RREIRDLTDRDREAFLDAMQIWYTVPTDVGKARYGPSFSNYQVITAYHNADVENFCYHIGLQFLTSHAAFDLTMERYLQMIDPSVSLP 264
RREIRDLTDRDREAFLDAM+IWYTVPTD GKA+YGP++S+Y I A H DVE YH G+QFLTSHAAFDL +ERYLQMIDP+VSLP
Sbjct: 26 RREIRDLTDRDREAFLDAMEIWYTVPTDGGKAKYGPNYSSYMSIAAIHGTDVETCSYHQGMQFLTSHAAFDLIVERYLQMIDPTVSLP 113
BLAST of mRNA_Ecto-sp13_S_contig12753.2283.1 vs. uniprot
Match: D8LM86_ECTSI (Hypothetical tyrosinase-like protein F21C3.2 in chromosome I, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM86_ECTSI) HSP 1 Score: 150 bits (378), Expect = 1.140e-40 Identity = 68/88 (77.27%), Postives = 75/88 (85.23%), Query Frame = 1
Query: 1 RREIRDLTDRDREAFLDAMQIWYTVPTDVGKARYGPSFSNYQVITAYHNADVENFCYHIGLQFLTSHAAFDLTMERYLQMIDPSVSLP 264
RREIR+LTDRDREAF DAMQ WYT+P VGK YGP FSNY +TA H +V+NFCYH G+QFLTSHAAFDLTMERYLQMIDP+VSLP
Sbjct: 145 RREIRELTDRDREAFFDAMQTWYTIPNSVGKTTYGPDFSNYMPVTAIHGTEVQNFCYHQGMQFLTSHAAFDLTMERYLQMIDPTVSLP 232
BLAST of mRNA_Ecto-sp13_S_contig12753.2283.1 vs. uniprot
Match: D7G530_ECTSI (Hypothetical tyrosinase-like protein F21C3.2 in chromosome I, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G530_ECTSI) HSP 1 Score: 147 bits (370), Expect = 7.880e-40 Identity = 67/88 (76.14%), Postives = 76/88 (86.36%), Query Frame = 1
Query: 1 RREIRDLTDRDREAFLDAMQIWYTVPTDVGKARYGPSFSNYQVITAYHNADVENFCYHIGLQFLTSHAAFDLTMERYLQMIDPSVSLP 264
RREIRDLTD DREAFLDAM+ WYT+PTD GKA+YGP++SNY I A H D +NFCYH G+QFLTSHAAFDL +ERYLQMIDP+VSLP
Sbjct: 107 RREIRDLTDGDREAFLDAMETWYTLPTDAGKAKYGPNYSNYMSIAAIHGTDYKNFCYHQGMQFLTSHAAFDLIVERYLQMIDPTVSLP 194
BLAST of mRNA_Ecto-sp13_S_contig12753.2283.1 vs. uniprot
Match: D7FSG6_ECTSI (Common central domain of tyrosinase family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSG6_ECTSI) HSP 1 Score: 117 bits (292), Expect = 1.220e-28 Identity = 52/88 (59.09%), Postives = 72/88 (81.82%), Query Frame = 1
Query: 1 RREIRDLTDRDREAFLDAMQIWYTVPTDVGKARYGPSFSNYQVITAYHNADVENFCYHIGLQFLTSHAAFDLTMERYLQMIDPSVSLP 264
RRE+RDL++ DREAFLDAM+ +Y V + G+A+YG F +YQ++ +YH+AD+++FCYH G+QFLT+HAAF L +ER LQ I+P VSLP
Sbjct: 129 RRELRDLSEADREAFLDAMEAYYAVSKEDGRAKYGEGFFDYQLLASYHSADLKSFCYHAGVQFLTAHAAFGLMLERSLQKINPRVSLP 216
BLAST of mRNA_Ecto-sp13_S_contig12753.2283.1 vs. uniprot
Match: A0A835Z854_9STRA (Polyphenol oxidase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z854_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 1.670e-17 Identity = 45/88 (51.14%), Postives = 62/88 (70.45%), Query Frame = 1
Query: 1 RREIRDLTDRDREAFLDAMQIWYTVPTDVGKARYGPSFSNYQVITAYHNADVENFCYHIGLQFLTSHAAFDLTMERYLQMIDPSVSLP 264
RREIR L+ DR+ FLDA+ I Y + G+A+YG F +Y+ + A H+ D++ FCYH G QF+T+H AF++ +ER LQ IDP VSLP
Sbjct: 132 RREIRALSQVDRDRFLDALAILYFNSDEEGQAKYGDQFVSYERLCAMHD-DIK-FCYHGGQQFITAHWAFNMMVERSLQSIDPGVSLP 217
BLAST of mRNA_Ecto-sp13_S_contig12753.2283.1 vs. uniprot
Match: A0A7S2G2V6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G2V6_9STRA) HSP 1 Score: 72.8 bits (177), Expect = 1.220e-14 Identity = 41/91 (45.05%), Postives = 52/91 (57.14%), Query Frame = 1
Query: 1 RREIRDLTDRDREAFLDAMQIWYTVPTDVGKARYGPSFSNYQVITAYHNADV-ENFCYHI--GLQFLTSHAAFDLTMERYLQMIDPSVSLP 264
RREIR L+D DR F DA ++ + D GKA YG F V T HN + +C H+ G FL SHAA L ER LQ ++PSV++P
Sbjct: 13 RREIRSLSDPDRNTFFDAAEVLFNTSCDEGKAIYGDFFECIDVFTRLHNTLAGDPYCDHMHDGYGFLISHAALTLWFERVLQTVEPSVTVP 103
BLAST of mRNA_Ecto-sp13_S_contig12753.2283.1 vs. uniprot
Match: A0A7S3XTX4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XTX4_HETAK) HSP 1 Score: 72.8 bits (177), Expect = 4.990e-13 Identity = 37/93 (39.78%), Postives = 53/93 (56.99%), Query Frame = 1
Query: 1 RREIRDLTDRDREAFLDAMQIWYTVPTDVGKARYGPSFSNYQVITAYHNA-----DVENFCYHIGLQFLTSHAAFDLTMERYLQMIDPSVSLP 264
RRE+R LTD DRE F ++ P + G+ARYGP+F N HN D ++ H+G FL +H L ME+ LQ++DP++S+P
Sbjct: 200 RRELRQLTDEDRERFFQGLEAMVKTPPEEGRARYGPAFRNNDHFVHLHNVLAGARDCDHL--HLGRGFLFNHVGITLEMEQALQVVDPALSIP 290
BLAST of mRNA_Ecto-sp13_S_contig12753.2283.1 vs. uniprot
Match: D7G0K0_ECTSI (Tyrosinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0K0_ECTSI) HSP 1 Score: 72.0 bits (175), Expect = 8.990e-13 Identity = 40/91 (43.96%), Postives = 51/91 (56.04%), Query Frame = 1
Query: 1 RREIRDLTDRDREAFLDAMQIWYTVPTDVGKARYGPSFSNYQVITAYH---NADVENFCYHIGLQFLTSHAAFDLTMERYLQMIDPSVSLP 264
RREIR LTD+DREAF DAM+ Y +PT G A YG + + H A E +H +T H F L E+ LQ++DPSVS+P
Sbjct: 42 RREIRQLTDKDREAFFDAMETLYRLPTGEGVALYGEDYKGIEFFVQMHLDGAAVKECDHWHDDAGIVTHHVGFTLLFEQALQVVDPSVSIP 132 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12753.2283.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig12753.2283.1 >prot_Ecto-sp13_S_contig12753.2283.1 ID=prot_Ecto-sp13_S_contig12753.2283.1|Name=mRNA_Ecto-sp13_S_contig12753.2283.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=89bp RREIRDLTDRDREAFLDAMQIWYTVPTDVGKARYGPSFSNYQVITAYHNAback to top mRNA from alignment at Ecto-sp13_S_contig12753:2957..3698+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig12753.2283.1 ID=mRNA_Ecto-sp13_S_contig12753.2283.1|Name=mRNA_Ecto-sp13_S_contig12753.2283.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=742bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12753:2957..3698+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12753:2957..3698+ >mRNA_Ecto-sp13_S_contig12753.2283.1 ID=mRNA_Ecto-sp13_S_contig12753.2283.1|Name=mRNA_Ecto-sp13_S_contig12753.2283.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=267bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12753:2957..3698+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |