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Homology
BLAST of mRNA_Ecto-sp13_S_contig1275.2280.1 vs. uniprot
Match: A0A6H5KU57_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU57_9PHAE) HSP 1 Score: 638 bits (1646), Expect = 2.760e-221 Identity = 430/525 (81.90%), Postives = 446/525 (84.95%), Query Frame = 1
Query: 1 MAWNVHDLFSGRPSARPTSAKASGGKWSSXXXXXXXXXXLHSSSNISSASGPPARARSGQVAQGGVINSALWAIARTQALVDAVEHVEAKYGDTPVLSGMLHTLRLADLNDASSIRQAANAASTFLQANPCQYYTPMHPIDVIRGVVGTCVDSEEVFKAALTTTYRITEKCTLCSWKEAKGTATEDKFECTTSDSVQMAIELRSAHNIKTGICEKCLKKSVAKRYRVERTAPCFVATWTGLAKAKPARESLFILTPFGESLRFSLAVMIAFCDRKAVCLFSEGSNYYKVEGNSVKVITKSEWQNTQPCLALFSRQGAGGRGGGPSSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDASSSWKNGSSSSVSNGGHVPSSPGVASENGVTASRLKGKEDGERERDGAGREREVARTTAPDAESNDNKAGRYGSSSAGVPDAEPSTITGAIKRMFTGRSDEGGWLRRANTSGSSTVREVESPGG 1575
MAWNV+DLFSGRPSARPTSAKAS GK XXXXXXXXXX GPP RARSGQ AQ GVINSALWAIARTQALVDAVEHVEAK+GD PVLS MLHTLR ADLNDASSIRQAA A+STFLQANPCQ YTPMHPIDVIRG+VGTC DSEEVFKAALTTTYRIT +CTLCSWKEAKGTATEDK ECTTSDSVQMAIELRSAHNIKTGIC KC KKSVA+RYR++RTAPCFVATWTGLAKAKPARESLFILT FGESLRFSLAVMIAFCDRKAVCLFSEGSNYYKVEG+SVKVITKSEWQNTQPCLALFSRQ AGGRGGG SSF XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SS VSNGGH P SP VASE+G TA+ L+G+ DGAG REVARTTAP+A+SNDNK GR G SSAGVPDAE STI+GA KRMF GRSDEGGWLRRAN GSS VRE ESPGG
Sbjct: 1 MAWNVNDLFSGRPSARPTSAKASAGK-RXXXXXXXXXXXXXXXXXXXXXXGPPTRARSGQAAQSGVINSALWAIARTQALVDAVEHVEAKHGDAPVLSAMLHTLRRADLNDASSIRQAAEASSTFLQANPCQCYTPMHPIDVIRGIVGTCADSEEVFKAALTTTYRITNECTLCSWKEAKGTATEDKLECTTSDSVQMAIELRSAHNIKTGICPKCQKKSVARRYRIDRTAPCFVATWTGLAKAKPARESLFILTTFGESLRFSLAVMIAFCDRKAVCLFSEGSNYYKVEGSSVKVITKSEWQNTQPCLALFSRQVAGGRGGGLSSFAHGGGAKAGKKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSS-VSNGGHEPYSPWVASEDGATANGLEGEXXXXXXXDGAGGAREVARTTAPNAKSNDNKVGRSGLSSAGVPDAERSTISGAFKRMFRGRSDEGGWLRRANMRGSSMVREGESPGG 523
BLAST of mRNA_Ecto-sp13_S_contig1275.2280.1 vs. uniprot
Match: A0A6H5KVW5_9PHAE (ULP_PROTEASE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVW5_9PHAE) HSP 1 Score: 150 bits (378), Expect = 1.960e-34 Identity = 108/152 (71.05%), Postives = 113/152 (74.34%), Query Frame = 1
Query: 1735 MDVEDDIQLVTKECRSRFFRDDGTPQGLAAVSXXXXXXXXXXXXXXXXXXXXXXXAPVGWLSPRRRPPVSPPIRVPERADGXXXXXXXXXXXXXGSDARPSRIAAAXTEPXXPPEVHNVDDEVDPRKEDDTSASKGKRHPSGVPMPFIGPAQ 2190
MDVEDD+QLVTKECRSRFF D GTPQG AAVS XXXXXXXXX AP GWLSPRRRPP SPPIRVPERA XXXXXXXXXXXXX X XXPPEVHNVDDEVD RKED+ S SKGKRHPSG+P+PFIGPA+
Sbjct: 1 MDVEDDVQLVTKECRSRFFCDAGTPQGSAAVSLSPLPPRKEAXXXXXXXXXANCGAPAGWLSPRRRPPGSPPIRVPERAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPEVHNVDDEVDQRKEDEASDSKGKRHPSGLPVPFIGPAR 152
BLAST of mRNA_Ecto-sp13_S_contig1275.2280.1 vs. uniprot
Match: D8LHH5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHH5_ECTSI) HSP 1 Score: 124 bits (311), Expect = 1.760e-30 Identity = 59/67 (88.06%), Postives = 64/67 (95.52%), Query Frame = 1
Query: 298 MLHTLRLADLNDASSIRQAANAASTFLQANPCQYYTPMHPIDVIRGVVGTCVDSEEVFKAALTTTYR 498
MLHTLR ADLNDASS RQAA+AASTFL+ANPCQY+TPMHPID IRG+VGTCVDSE+VFKAALTTTYR
Sbjct: 1 MLHTLRRADLNDASSTRQAADAASTFLKANPCQYFTPMHPIDAIRGIVGTCVDSEQVFKAALTTTYR 67
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Stop | 0 |
| Start | 1 |
| Model size | 2192 |
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Ec32 ortholog description | Peptidase C48, SUMO/Sentrin/Ubl1 |
| Ec32 ortholog | Ec-11_004050.1 |
| Cds size | 2190 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1681462682.1856346-CDS-Ecto-sp13_S_contig1275:12901..14249 | 1681462682.1856346-CDS-Ecto-sp13_S_contig1275:12901..14249 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1275 12902..14249 - |
| 1681462682.194348-CDS-Ecto-sp13_S_contig1275:14546..14719 | 1681462682.194348-CDS-Ecto-sp13_S_contig1275:14546..14719 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1275 14547..14719 - |
| 1681462682.2022932-CDS-Ecto-sp13_S_contig1275:15028..15200 | 1681462682.2022932-CDS-Ecto-sp13_S_contig1275:15028..15200 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1275 15029..15200 - |
| 1681462682.209616-CDS-Ecto-sp13_S_contig1275:15430..15927 | 1681462682.209616-CDS-Ecto-sp13_S_contig1275:15430..15927 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1275 15431..15927 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1275.2280.1 >prot_Ecto-sp13_S_contig1275.2280.1 ID=prot_Ecto-sp13_S_contig1275.2280.1|Name=mRNA_Ecto-sp13_S_contig1275.2280.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=730bp
MAWNVHDLFSGRPSARPTSAKASGGKWSSSSSSSNKDGGLHSSSNISSAS GPPARARSGQVAQGGVINSALWAIARTQALVDAVEHVEAKYGDTPVLSGM LHTLRLADLNDASSIRQAANAASTFLQANPCQYYTPMHPIDVIRGVVGTC VDSEEVFKAALTTTYRITEKCTLCSWKEAKGTATEDKFECTTSDSVQMAI ELRSAHNIKTGICEKCLKKSVAKRYRVERTAPCFVATWTGLAKAKPARES LFILTPFGESLRFSLAVMIAFCDRKAVCLFSEGSNYYKVEGNSVKVITKS EWQNTQPCLALFSRQGAGGRGGGPSSFGHGGGAKAGKKRQREGNGNGQYS ASSSGGGSKARSAAAAAVAAAAAEVIELDDDDTDEGDANVPVGGSGRGKD ASSSWKNGSSSSVSNGGHVPSSPGVASENGVTASRLKGKEDGERERDGAG REREVARTTAPDAESNDNKAGRYGSSSAGVPDAEPSTITGAIKRMFTGRS DEGGWLRRANTSGSSTVREVESPGGGGGGPGPAASGGAASGSRRPRPHGN LDTEAGGDGSKTAGEEEKKSRTNGDGDSMDVEDDIQLVTKECRSRFFRDD GTPQGLAAVSSSPPPPRKVATAAAASAVAATGGAPVGWLSPRRRPPVSPP IRVPERADGGAAASAAGSTVVGGSDARPSRIAAAATEPPEPPEVHNVDDE VDPRKEDDTSASKGKRHPSGVPMPFIGPAQ back to topmRNA from alignment at Ecto-sp13_S_contig1275:12902..15927- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp13_S_contig1275.2280.1 ID=mRNA_Ecto-sp13_S_contig1275.2280.1|Name=mRNA_Ecto-sp13_S_contig1275.2280.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3026bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1275:12902..15927- (Ectocarpus species13 EcNAP12_S_4_19m) ATGGCGTGGAATGTTCACGATCTGTTTAGCGGGCGGCCCTCTGCTCGTCC
TACTTCCGCGAAAGCATCGGGAGGAAAATGGAGCAGCAGCAGCAGCAGCA
GCAACAAGGACGGAGGACTTCACAGTAGCAGCAACATTAGCAGCGCCAGC
GGTCCTCCAGCAAGAGCAAGGAGCGGCCAAGTCGCCCAAGGCGGGGTCAT
CAACTCGGCCCTGTGGGCCATCGCTCGGACGCAGGCCCTGGTGGACGCCG
TCGAGCACGTAGAGGCCAAGTACGGCGACACCCCGGTGCTATCAGGCATG
TTGCACACCCTCCGCCTGGCGGACCTCAACGATGCCTCGAGCATACGGCA
AGCCGCCAACGCCGCGAGCACATTTCTCCAAGCGAATCCCTGCCAGTACT
ACACCCCTATGCACCCCATCGACGTGATCCGGGGCGTTGTGGGCACTTGC
GTGGATTCCGAGGAGGTGTTCAAGGCAGCCCTGACGACAACCTACCGGTG
ATTCTTGATGAGCAGCTCCTCTCTCTTGTGATTCCAGACGTCGCATGATA
CTGCTGTGCACTGCTGCAGCACTGCTTTTATTAGGGTACCGTTGGCGGAT
CTGTGCCCAGCAGGGGCAATGTGCAAAGCCAACAACAACCAAAGCTGCGG
AAGCATTTGGCCCCCCAGTGTGTCATGTGACACAAGCCGCCCCCGATGCC
GTGTCTCTCCTTTTTTGACAAAAACAGGATTACCGAAAAATGCACCCTCT
GTTCGTGGAAGGAGGCCAAAGGTACAGCCACCGAGGACAAGTTTGAGTGC
ACAACCTCCGACAGCGTGCAGATGGCGATCGAGCTCCGCTCTGCTCACAA
CATCAAGACGGGCATTTGCGAGAAGTGCCTGAAGAAGAGCGTCGCGAAGG
TGATGCAAGAAAAACAAGTGGACTTAGTTACCTACGTTTTCCCTTTTTTC
CTTGCGCACTGCTGCTCGAGCAAGGTGAACGCCTAATTCGCGTGTCCTAT
GCTGCCCTTCTGGTACTGCAGTGTGGGGGTGGCGACTGACCAACAGCAAG
GTGATTGATCTAGCTTAAGCTTTGTCCCTCTAAGGTGTTTACTTCATGCA
GCATCAAAAGCTACCCTATCTATGCGCAAACGGCACACACCGTGTTTGTG
ATCCCTGTACCCGCGCCGTTTTCCTGTTTGGTACCCGACTGCTGCAAACG
CTCCGCAGAGATACAGAGTAGAGAGAACAGCGCCGTGCTTTGTGGCGACG
TGGACTGGTCTCGCCAAGGCGAAGCCCGCGCGAGAGTCTCTGTTCATCCT
CACCCCTTTCGGCGAGAGTTTGCGGTTCTCTCTCGCCGTCATGATCGCTT
TTTGCGATCGAAAAGCGGTCTGCCTCTTCAGGTATGTGTAACAACGTGTT
TGGGAGCACGGGGAGGTTTTGAGCGGGGAGGGGCTTTACGCGGCTTTCGA
CGTCGCGAGAGCATCTTGCGCGCCCTTTTCATTTACCATGTTGTTGTGTC
TTTTGCTCGAAGGTGTGGTCTCTAGCGTTCGCAGGCAAGCAACCTCGAGA
AATGAGTGCATGCATCTACCGCGCGCGCGATCGCGTGAGTGATCACCTAG
TGTCACCATTGGCCGCGTGCACCCCAATGCCTTACCTCGCGCCTGTTCGT
TGACACCCGCCACACCCCACGAAAACAGCGAGGGAAGCAACTACTACAAG
GTGGAGGGGAACAGCGTGAAGGTGATCACGAAAAGCGAGTGGCAAAACAC
CCAGCCGTGTCTGGCGCTGTTCAGCCGCCAGGGTGCTGGCGGCCGAGGAG
GAGGCCCCTCTTCGTTCGGGCATGGCGGGGGTGCAAAGGCCGGAAAGAAG
CGCCAGCGGGAAGGGAACGGCAACGGGCAGTATTCCGCGAGCAGCAGCGG
CGGCGGCAGCAAGGCGCGGAGTGCGGCAGCGGCGGCGGTGGCGGCGGCGG
CGGCTGAGGTTATCGAATTGGACGATGATGATACCGACGAGGGTGATGCC
AACGTCCCGGTGGGCGGCAGCGGACGCGGGAAAGACGCCAGTAGTAGTTG
GAAGAACGGTAGCAGTAGTAGCGTTAGCAACGGTGGGCACGTGCCCTCCA
GCCCTGGGGTGGCAAGCGAAAATGGCGTGACTGCTAGCAGATTGAAAGGG
AAAGAAGATGGCGAGAGGGAGCGCGACGGCGCAGGGCGAGAGCGGGAGGT
AGCACGAACAACAGCGCCCGACGCGGAAAGTAACGACAACAAAGCGGGGC
GATACGGATCGTCGAGCGCGGGGGTACCGGACGCGGAACCATCAACAATC
ACCGGCGCAATCAAGAGAATGTTCACAGGCCGATCGGACGAGGGAGGCTG
GCTTCGACGAGCGAACACGAGCGGCTCGTCGACGGTGCGGGAGGTCGAGA
GTCCAGGCGGGGGGGGAGGTGGGCCTGGCCCGGCGGCATCCGGAGGTGCT
GCGTCGGGATCGCGGCGACCGCGTCCCCACGGCAACCTCGATACGGAAGC
CGGAGGTGACGGCAGCAAGACAGCGGGAGAGGAGGAGAAGAAGTCGCGAA
CGAACGGCGACGGCGACAGCATGGATGTCGAAGATGACATTCAACTGGTC
ACGAAAGAGTGTCGTAGTCGTTTCTTTCGTGACGATGGCACGCCGCAAGG
CTTGGCGGCGGTATCATCGTCGCCGCCGCCGCCTCGAAAAGTGGCCACTG
CAGCAGCCGCTTCCGCCGTAGCTGCTACCGGCGGTGCTCCTGTCGGCTGG
CTATCGCCGAGACGCCGCCCGCCCGTCTCGCCGCCAATCCGTGTACCCGA
GCGTGCGGATGGCGGTGCCGCCGCCTCCGCTGCCGGCAGCACCGTTGTCG
GCGGCTCTGACGCCCGTCCCTCGCGAATTGCAGCGGCAGCGACCGAGCCG
CCAGAGCCTCCCGAGGTCCACAACGTCGATGACGAGGTTGACCCGCGGAA
AGAGGATGATACATCTGCTTCCAAGGGGAAGAGACATCCGAGTGGTGTCC
CGATGCCGTTCATCGGCCCCGCGCAG back to topCoding sequence (CDS) from alignment at Ecto-sp13_S_contig1275:12902..15927- >mRNA_Ecto-sp13_S_contig1275.2280.1 ID=mRNA_Ecto-sp13_S_contig1275.2280.1|Name=mRNA_Ecto-sp13_S_contig1275.2280.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2190bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1275:12902..15927- (Ectocarpus species13 EcNAP12_S_4_19m) ATGGCGTGGAATGTTCACGATCTGTTTAGCGGGCGGCCCTCTGCTCGTCC TACTTCCGCGAAAGCATCGGGAGGAAAATGGAGCAGCAGCAGCAGCAGCA GCAACAAGGACGGAGGACTTCACAGTAGCAGCAACATTAGCAGCGCCAGC GGTCCTCCAGCAAGAGCAAGGAGCGGCCAAGTCGCCCAAGGCGGGGTCAT CAACTCGGCCCTGTGGGCCATCGCTCGGACGCAGGCCCTGGTGGACGCCG TCGAGCACGTAGAGGCCAAGTACGGCGACACCCCGGTGCTATCAGGCATG TTGCACACCCTCCGCCTGGCGGACCTCAACGATGCCTCGAGCATACGGCA AGCCGCCAACGCCGCGAGCACATTTCTCCAAGCGAATCCCTGCCAGTACT ACACCCCTATGCACCCCATCGACGTGATCCGGGGCGTTGTGGGCACTTGC GTGGATTCCGAGGAGGTGTTCAAGGCAGCCCTGACGACAACCTACCGGAT TACCGAAAAATGCACCCTCTGTTCGTGGAAGGAGGCCAAAGGTACAGCCA CCGAGGACAAGTTTGAGTGCACAACCTCCGACAGCGTGCAGATGGCGATC GAGCTCCGCTCTGCTCACAACATCAAGACGGGCATTTGCGAGAAGTGCCT GAAGAAGAGCGTCGCGAAGAGATACAGAGTAGAGAGAACAGCGCCGTGCT TTGTGGCGACGTGGACTGGTCTCGCCAAGGCGAAGCCCGCGCGAGAGTCT CTGTTCATCCTCACCCCTTTCGGCGAGAGTTTGCGGTTCTCTCTCGCCGT CATGATCGCTTTTTGCGATCGAAAAGCGGTCTGCCTCTTCAGCGAGGGAA GCAACTACTACAAGGTGGAGGGGAACAGCGTGAAGGTGATCACGAAAAGC GAGTGGCAAAACACCCAGCCGTGTCTGGCGCTGTTCAGCCGCCAGGGTGC TGGCGGCCGAGGAGGAGGCCCCTCTTCGTTCGGGCATGGCGGGGGTGCAA AGGCCGGAAAGAAGCGCCAGCGGGAAGGGAACGGCAACGGGCAGTATTCC GCGAGCAGCAGCGGCGGCGGCAGCAAGGCGCGGAGTGCGGCAGCGGCGGC GGTGGCGGCGGCGGCGGCTGAGGTTATCGAATTGGACGATGATGATACCG ACGAGGGTGATGCCAACGTCCCGGTGGGCGGCAGCGGACGCGGGAAAGAC GCCAGTAGTAGTTGGAAGAACGGTAGCAGTAGTAGCGTTAGCAACGGTGG GCACGTGCCCTCCAGCCCTGGGGTGGCAAGCGAAAATGGCGTGACTGCTA GCAGATTGAAAGGGAAAGAAGATGGCGAGAGGGAGCGCGACGGCGCAGGG CGAGAGCGGGAGGTAGCACGAACAACAGCGCCCGACGCGGAAAGTAACGA CAACAAAGCGGGGCGATACGGATCGTCGAGCGCGGGGGTACCGGACGCGG AACCATCAACAATCACCGGCGCAATCAAGAGAATGTTCACAGGCCGATCG GACGAGGGAGGCTGGCTTCGACGAGCGAACACGAGCGGCTCGTCGACGGT GCGGGAGGTCGAGAGTCCAGGCGGGGGGGGAGGTGGGCCTGGCCCGGCGG CATCCGGAGGTGCTGCGTCGGGATCGCGGCGACCGCGTCCCCACGGCAAC CTCGATACGGAAGCCGGAGGTGACGGCAGCAAGACAGCGGGAGAGGAGGA GAAGAAGTCGCGAACGAACGGCGACGGCGACAGCATGGATGTCGAAGATG ACATTCAACTGGTCACGAAAGAGTGTCGTAGTCGTTTCTTTCGTGACGAT GGCACGCCGCAAGGCTTGGCGGCGGTATCATCGTCGCCGCCGCCGCCTCG AAAAGTGGCCACTGCAGCAGCCGCTTCCGCCGTAGCTGCTACCGGCGGTG CTCCTGTCGGCTGGCTATCGCCGAGACGCCGCCCGCCCGTCTCGCCGCCA ATCCGTGTACCCGAGCGTGCGGATGGCGGTGCCGCCGCCTCCGCTGCCGG CAGCACCGTTGTCGGCGGCTCTGACGCCCGTCCCTCGCGAATTGCAGCGG CAGCGACCGAGCCGCCAGAGCCTCCCGAGGTCCACAACGTCGATGACGAG GTTGACCCGCGGAAAGAGGATGATACATCTGCTTCCAAGGGGAAGAGACA TCCGAGTGGTGTCCCGATGCCGTTCATCGGCCCCGCGCAG back to top
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