prot_Ecto-sp13_S_contig12749.2278.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig12749.2278.1 vs. uniprot
Match: D7G5V4_ECTSI (HMG box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5V4_ECTSI) HSP 1 Score: 418 bits (1075), Expect = 3.740e-146 Identity = 205/217 (94.47%), Postives = 209/217 (96.31%), Query Frame = 0
Query: 1 VSIEPRPDWQDILDAAASSLIPDGVGSNACGVVSGMEPIFKALPLWASVVHVAPHRVSVHQRSADGATDGVAFQHSLVKGDGGLVSTAKEEVYHNSVQDAFVIFNTHPSGFTRFVEHSRALTSGHNRSSEARGMVPKKTSPPRRKRKDPNRPRGYVSAFNFFVKDKRSAYVRDAQGVSPGNNNEVNKMLGQAWKELTTEEKNCYQARSDVDKCRYLK 217
VSIEPRPDWQDILDAAASSLIPDGVGSNACG V GMEP+F ALPLWASVVHVAPHRVSVHQRS+DG TDGVAFQHSLV GDGGLVSTAKEE+YHNSVQDAFVIFNTHPSG TRFVEHS+ALTSGH RSSEAR MVPKKTSPPRRKRKDPNRPRGYVSAFNFFVKDKRSAYVRDAQGVSPGNNNEVNKMLGQAWKELTTEEKNCYQARSDVDKCRYLK
Sbjct: 83 VSIEPRPDWQDILDAAASSLIPDGVGSNACGAVGGMEPLFNALPLWASVVHVAPHRVSVHQRSSDGVTDGVAFQHSLVNGDGGLVSTAKEEMYHNSVQDAFVIFNTHPSGSTRFVEHSQALTSGHTRSSEARRMVPKKTSPPRRKRKDPNRPRGYVSAFNFFVKDKRSAYVRDAQGVSPGNNNEVNKMLGQAWKELTTEEKNCYQARSDVDKCRYLK 299
BLAST of mRNA_Ecto-sp13_S_contig12749.2278.1 vs. uniprot
Match: A0A6H5JSJ1_9PHAE (HMG protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSJ1_9PHAE) HSP 1 Score: 416 bits (1068), Expect = 1.560e-142 Identity = 204/217 (94.01%), Postives = 209/217 (96.31%), Query Frame = 0
Query: 1 VSIEPRPDWQDILDAAASSLIPDGVGSNACGVVSGMEPIFKALPLWASVVHVAPHRVSVHQRSADGATDGVAFQHSLVKGDGGLVSTAKEEVYHNSVQDAFVIFNTHPSGFTRFVEHSRALTSGHNRSSEARGMVPKKTSPPRRKRKDPNRPRGYVSAFNFFVKDKRSAYVRDAQGVSPGNNNEVNKMLGQAWKELTTEEKNCYQARSDVDKCRYLK 217
VSIEPRPDWQDILDAAASSLIPDGVGSNACG VSGMEP+FKA+PLWASVVHVAPHRVSVHQRSADGATDGVAFQHSLV GDGGLVSTAKEE+YH+SVQDAFVIFNTHPSG TRFVEHSRALTSGH SSE R VPKKTSPP+RKRKDPNRPRGYVSAFNFFVKDKRSAYVRDAQGVSPGNNNEVNKMLGQAWKELTTEEKNCYQARSDVDKCRYLK
Sbjct: 146 VSIEPRPDWQDILDAAASSLIPDGVGSNACGAVSGMEPLFKAVPLWASVVHVAPHRVSVHQRSADGATDGVAFQHSLVSGDGGLVSTAKEEMYHSSVQDAFVIFNTHPSGSTRFVEHSRALTSGHTHSSEPRRTVPKKTSPPKRKRKDPNRPRGYVSAFNFFVKDKRSAYVRDAQGVSPGNNNEVNKMLGQAWKELTTEEKNCYQARSDVDKCRYLK 362
BLAST of mRNA_Ecto-sp13_S_contig12749.2278.1 vs. uniprot
Match: A0A2Z4MTA2_SACJA (HMG-box containing protein isoform 1 n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A2Z4MTA2_SACJA) HSP 1 Score: 177 bits (450), Expect = 2.830e-50 Identity = 102/223 (45.74%), Postives = 138/223 (61.88%), Query Frame = 0
Query: 1 VSIEPRPDWQDILDAAASSLIPDGVGSNACGVVSGMEPIFK--ALPLWASVVHVAPHRVSVHQRSADGATDGVAFQHSLVKGDGGLVSTAKEEVYHNSVQDAFVIFNTHPSGFTRFVEHSRALTSGHNRSSEARGMVP-KKTSPPRRKRKDPNRPRGYVSAFNFFVKDKRSAYVR---DAQGVSPGNNNEVNKMLGQAWKELTTEEKNCYQARSDVDKCRYLK 217
VSI R DW+D L A +SLI S A G G+ + + P W+SVVH+AP RV+VHQR AD AT+G++ + + + + ++VQDAFVIF TH RF +H+ AL G +R S+ + V + + P+R +KDPNRPRGY+SAFNFFVKDKR YV+ +AQG S +NNE+NKMLG+ WK T +EK Y+ ++ DK RYLK
Sbjct: 83 VSINSRSDWRDALSATVTSLIMGSTESIAGGAPCGLNSRSEWFSSPAWSSVVHMAPSRVAVHQRCADEATEGLSVHYFRTMVEDRHLGLSSIHDRQDNVQDAFVIFGTHSRHPVRFRQHTGALGHGRSRYSKPQTRVAYESATAPKRHKKDPNRPRGYISAFNFFVKDKRPTYVQSRPNAQGHSLEHNNEINKMLGKVWKTATEQEKKTYEEKATADKVRYLK 305
BLAST of mRNA_Ecto-sp13_S_contig12749.2278.1 vs. uniprot
Match: A0A7J6V6Z4_THATH (High mobility group b protein n=1 Tax=Thalictrum thalictroides TaxID=46969 RepID=A0A7J6V6Z4_THATH) HSP 1 Score: 61.6 bits (148), Expect = 1.120e-7 Identity = 34/80 (42.50%), Postives = 46/80 (57.50%), Query Frame = 0
Query: 138 KTSPPRRKRKDPNRPRGYVSAFNFFVKDKRSAYVRDAQGVSPGNNNEVNKMLGQAWKELTTEEKNCYQARSDVDKCRYLK 217
+T R++ +DP RP+ Y SA+NFF DKRS + + + P + KM+G+AW LT EEK YQ DK RY K
Sbjct: 216 RTKKKRQRLEDPARPKRYRSAYNFFFSDKRS----ELKTLCPHRERDFTKMIGEAWNNLTGEEKKVYQEIGTRDKERYQK 291
BLAST of mRNA_Ecto-sp13_S_contig12749.2278.1 vs. uniprot
Match: A0A7S0WQ82_9CHLO (FACT complex subunit SSRP1 n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0WQ82_9CHLO) HSP 1 Score: 60.8 bits (146), Expect = 3.210e-7 Identity = 31/75 (41.33%), Postives = 43/75 (57.33%), Query Frame = 0
Query: 144 RKRKDPNRPRGYVSAFNFFVKDKRSAYVRDAQGVSPGNNNEVNKMLGQAWKELTTEEKNCYQARSDVDKCRYLKV 218
RK+KDPN P+G +SAF +F R + G+ G EV K++G+ WK T E+K Y+A + DK RY K
Sbjct: 597 RKKKDPNAPKGAISAFMYFSNALRDKVKEENPGIKFG---EVGKLMGERWKAATAEDKAPYEAMAREDKARYAKA 668
BLAST of mRNA_Ecto-sp13_S_contig12749.2278.1 vs. uniprot
Match: A0A0J9TH31_PLAVI (High mobility group protein n=6 Tax=Plasmodium vivax TaxID=5855 RepID=A0A0J9TH31_PLAVI) HSP 1 Score: 58.2 bits (139), Expect = 4.640e-7 Identity = 36/120 (30.00%), Postives = 64/120 (53.33%), Query Frame = 0
Query: 101 FVIFNTH---PSGFTRFVEHSRALTSGHNRSSEARGMVPKKTSPPRRKRKDPNRPRGYVSAFNFFVKDKRSAYVRDAQGVSPGNNNEVNKMLGQAWKELTTEEKNCYQARSDVDKCRYLK 217
F I N H P+G + E + T + A+ +RK+KDP P+ +SA+ F+VKDKR +++ ++ + +V K++G+AW +L+ +K Y+ ++ +DK RY K
Sbjct: 42 FHILNPHLELPNGKKQTQELATVTTKQMSNKMAAKSQKKVLKKQNKRKKKDPLAPKRALSAYMFYVKDKRLELIKERPELAK-DVAQVGKLVGEAWGQLSAAQKTPYEKKAQLDKVRYSK 160
BLAST of mRNA_Ecto-sp13_S_contig12749.2278.1 vs. uniprot
Match: W7APU7_PLAVN (High mobility group protein B2, putative n=8 Tax=Plasmodium TaxID=5820 RepID=W7APU7_PLAVN) HSP 1 Score: 56.2 bits (134), Expect = 5.430e-7 Identity = 27/75 (36.00%), Postives = 50/75 (66.67%), Query Frame = 0
Query: 143 RRKRKDPNRPRGYVSAFNFFVKDKRSAYVRDAQGVSPGNNNEVNKMLGQAWKELTTEEKNCYQARSDVDKCRYLK 217
++K+KDP P+ +SA+ F+VKDKR +++ ++ +V K++G+AW +LT +K Y+ ++++DK RY K
Sbjct: 15 KKKKKDPLAPKRALSAYMFYVKDKRLEIIQERPELAK-EVAQVGKLIGEAWGQLTPAQKAPYEKKAELDKVRYSK 88
BLAST of mRNA_Ecto-sp13_S_contig12749.2278.1 vs. uniprot
Match: A0A1J1GM50_PLAGA (HMG box domain-containing protein n=27 Tax=Plasmodiidae TaxID=1639119 RepID=A0A1J1GM50_PLAGA) HSP 1 Score: 56.2 bits (134), Expect = 5.560e-7 Identity = 26/75 (34.67%), Postives = 51/75 (68.00%), Query Frame = 0
Query: 143 RRKRKDPNRPRGYVSAFNFFVKDKRSAYVRDAQGVSPGNNNEVNKMLGQAWKELTTEEKNCYQARSDVDKCRYLK 217
++K+KDP P+ +SA+ F+VKDKR +++ ++ + +V K++G+AW +L+ +K+ Y+ ++ +DK RY K
Sbjct: 15 KKKKKDPLAPKRALSAYMFYVKDKRLEIIKEKPELAK-DVAQVGKLIGEAWGKLSAAQKSPYEKKAQLDKARYSK 88
BLAST of mRNA_Ecto-sp13_S_contig12749.2278.1 vs. uniprot
Match: A0A2G5ELZ5_AQUCA (Uncharacterized protein n=1 Tax=Aquilegia coerulea TaxID=218851 RepID=A0A2G5ELZ5_AQUCA) HSP 1 Score: 58.9 bits (141), Expect = 9.770e-7 Identity = 35/80 (43.75%), Postives = 45/80 (56.25%), Query Frame = 0
Query: 143 RRKRK-----DPNRPRGYVSAFNFFVKDKRSAYVRDAQGVSPGNNNEVNKMLGQAWKELTTEEKNCYQARSDVDKCRYLK 217
RRKRK DP+RP+ + SA+NFF DK S + + + P + KM+G+AW LT EEK YQ DK RY K
Sbjct: 222 RRKRKRQRLEDPDRPKKHRSAYNFFFSDKHS----ELKSLCPHRERDFTKMIGEAWSNLTGEEKKVYQEIGIRDKERYQK 297
BLAST of mRNA_Ecto-sp13_S_contig12749.2278.1 vs. uniprot
Match: Q7R8Z3_PLAYO (High mobility group protein n=5 Tax=Plasmodium (Vinckeia) TaxID=418101 RepID=Q7R8Z3_PLAYO) HSP 1 Score: 56.2 bits (134), Expect = 1.010e-6 Identity = 27/75 (36.00%), Postives = 50/75 (66.67%), Query Frame = 0
Query: 143 RRKRKDPNRPRGYVSAFNFFVKDKRSAYVRDAQGVSPGNNNEVNKMLGQAWKELTTEEKNCYQARSDVDKCRYLK 217
++K+KDP P+ +SA+ F+VKDKR +++ ++ +V K++G+AW +LT +K Y+ ++++DK RY K
Sbjct: 43 KKKKKDPLAPKRALSAYMFYVKDKRLEIIQERPELAK-EVAQVGKLIGEAWGQLTPAQKAPYEKKAELDKVRYSK 116 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12749.2278.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp13_S_contig12749.2278.1 ID=prot_Ecto-sp13_S_contig12749.2278.1|Name=mRNA_Ecto-sp13_S_contig12749.2278.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=220bpback to top |