prot_Ecto-sp13_S_contig12743.2274.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12743.2274.1
Unique Nameprot_Ecto-sp13_S_contig12743.2274.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length341
Homology
BLAST of mRNA_Ecto-sp13_S_contig12743.2274.1 vs. uniprot
Match: A0A6H5K8R4_9PHAE (E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8R4_9PHAE)

HSP 1 Score: 572 bits (1473), Expect = 2.910e-183
Identity = 289/301 (96.01%), Postives = 293/301 (97.34%), Query Frame = 0
Query:   40 PRHSSMFGLSTNLGYLWVSHTRAGGSKVVPYRVARDSPLGVLVASDPMLAKPLRLSLHGLLMRLLVDQEFKRDFALAFARLYEYLNSLYCKGVGVSDESIFGFSVQTFTTPSLVRLLADASAETPSAILPNPDHGVPKVWRFSETPGLLALLAKALVRTMWDAGCRECGREGGREAVIAAQQPGPRGAARGENAFLEHDITNHRRFVHVFRDLEYALQSPGTALDVATLAANPGPGSEPIRLWLKVLSALQYMDTNVRWIGSHIEYESRRFYGAFGLSFSLASVTDALVDRALRKASPNNA 340
            PRHSSMFGLSTNLGYLWVSHTRAGGS+ VPYRVARDSPL VLVASDPM+AKPLRL LHGLLMRLLVDQEFKRDFALAFARLYEYLNSLYCKGVGVSDESIFGFSVQTFTTPSLVRLLADASA TPSAILPNPD GVPKVWRFSETPGLLALLA+ALVRTM DAGCR CGREGGREAVIAAQQPGPRGAARGENAFLEHDITNHRRF+HVFRDLEYALQSPGTALDVATLAANPGPGSEPIRLWLKVLSALQYMDTNVRWIGSHIEYESRRFYGAFGLSFSLASVTD LVDRALRKASPNNA
Sbjct:  124 PRHSSMFGLSTNLGYLWVSHTRAGGSEAVPYRVARDSPLVVLVASDPMIAKPLRLCLHGLLMRLLVDQEFKRDFALAFARLYEYLNSLYCKGVGVSDESIFGFSVQTFTTPSLVRLLADASAATPSAILPNPDLGVPKVWRFSETPGLLALLAEALVRTMRDAGCRGCGREGGREAVIAAQQPGPRGAARGENAFLEHDITNHRRFLHVFRDLEYALQSPGTALDVATLAANPGPGSEPIRLWLKVLSALQYMDTNVRWIGSHIEYESRRFYGAFGLSFSLASVTDVLVDRALRKASPNNA 424          
BLAST of mRNA_Ecto-sp13_S_contig12743.2274.1 vs. uniprot
Match: D7G3D3_ECTSI (E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3D3_ECTSI)

HSP 1 Score: 501 bits (1290), Expect = 2.120e-167
Identity = 261/300 (87.00%), Postives = 261/300 (87.00%), Query Frame = 0
Query:   41 RHSSMFGLSTNLGYLWVSHTRAGGSKVVPYRVARDSPLGVLVASDPMLAKPLRLSLHGLLMRLLVDQEFKRDFALAFARLYEYLNSLYCKGVGVSDESIFGFSVQTFTTPSLVRLLADASAETPSAILPNPDHGVPKVWRFSETPGLLALLAKALVRTMWDAGCRECGREGGREAVIAAQQPGPRGAARGENAFLEHDITNHRRFVHVFRDLEYALQSPGTALDVATLAANPGPGSEPIRLWLKVLSALQYMDTNVRWIGSHIEYESRRFYGAFGLSFSLASVTDALVDRALRKASPNNA 340
            RHSSMFGLSTNLGYLWVSHTRAGGSK VPYRVARDSPLGVLVASDPMLAKPLRLSLHGLLMRLLVDQEFKRDFALAFARLYEYLNSLYCKGVGVSDESIFGFSVQTFTTPSLVRLLADASAETPSAILPNPDHGVPKVWRFSETPGLLALLAKALVRTMWDAGCR CGREGGREAVIAAQQPGPRGAARGENAFLEHDITNHRRFVHVFRDLEYALQ                                     NVRWIGSHIEYESRRFYGAFGLSFSLASVTDALVDRALRKASPNNA
Sbjct:  492 RHSSMFGLSTNLGYLWVSHTRAGGSKAVPYRVARDSPLGVLVASDPMLAKPLRLSLHGLLMRLLVDQEFKRDFALAFARLYEYLNSLYCKGVGVSDESIFGFSVQTFTTPSLVRLLADASAETPSAILPNPDHGVPKVWRFSETPGLLALLAKALVRTMWDAGCRGCGREGGREAVIAAQQPGPRGAARGENAFLEHDITNHRRFVHVFRDLEYALQ-------------------------------------NVRWIGSHIEYESRRFYGAFGLSFSLASVTDALVDRALRKASPNNA 754          
BLAST of mRNA_Ecto-sp13_S_contig12743.2274.1 vs. uniprot
Match: A0A836CB31_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB31_9STRA)

HSP 1 Score: 167 bits (422), Expect = 3.350e-42
Identity = 105/259 (40.54%), Postives = 146/259 (56.37%), Query Frame = 0
Query:   77 PLGVLVASDPMLAKPLRLSLHGLLMRLLVDQEFKRDFALAFARLYEYLNSLYCKGVGVSDESIFGFSVQTFTTPSLVRLLADAS---AETPSAILPNPDHGVPKVWRFSETPGLLALLAKALVRTMWDAGCRECGREGGREAVIAAQQPGPRGAARGENAFLEHDITNHRRFVHVFRDLEYALQSPGTALDVATLAANPGPGSEPIRLWLKVLSALQYMDTNVRWIGSHIEYESRRFYGAFGLSFSLASVTDALVDRAL 332
            PL +L+ +DP+L K  R + H L MRLL D  FKR FA AF R +  L++L+ +GVG S ES+FGFSVQ FTTPSLV+LL   S   +E  SA++      +P+            +L + L+ +   AGC   GR+GG             GA   ++AFL+H + ++RRF HVF DLEY L SPG+            P       WL +LS LQ MD   R +G+H+EYE +R+  AFG+S +L SV++ L+ R +
Sbjct:  432 PLLLLMLADPLLLKQQRSAAHALFMRLLTDAAFKRAFAAAFGRAFRALHALFARGVGTSSESLFGFSVQIFTTPSLVQLLDGGSGDASELCSALVEAGKSPLPE-------GSAQGMLVQCLLDSFRTAGC---GRQGGE------------GAEGDKDAFLDHGVVSYRRFSHVFSDLEYVLSSPGSP-----------PRLSVAEHWLGLLSDLQGMDAAKRQLGTHVEYELQRWMSAFGISLALTSVSEVLIGRTI 657          
BLAST of mRNA_Ecto-sp13_S_contig12743.2274.1 vs. uniprot
Match: A0A4D9D1X7_9STRA (E3 ubiquitin-protein ligase n=6 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D1X7_9STRA)

HSP 1 Score: 152 bits (383), Expect = 4.980e-37
Identity = 97/260 (37.31%), Postives = 136/260 (52.31%), Query Frame = 0
Query:   74 RDSPLGVLVASDPMLAKPLRLSLHGLLMRLLVDQEFKRDFALAFARLYEYLNSLYCKGVGVSDESIFGFSVQTFTTPSLVRLLADASAETPSAILPNPDHGVPKVWRFSETPGLLALLAKALVRTMWDAGCRECGREGGREAVIAAQQPGPRGAARGENAFLEHDITNHRRFVHVFRDLEYALQSPGTALDVATLAANPGPGSEPIRLWLKVLSALQYMDTNVRWIGSHIEYESRRFYGAFGLSFSLASVTDALVDRALR 333
            + S L +L+ +D  L   LR  L  L + LLVD  FK   A +  R Y  LNSLY +GVG  D+S+F FSVQ +TTPS+VR LA ++ +                     +PGL+ +L +AL+     AG  +              QP  +G       F E+ +  HRR+ H+ RD++YALQ+ GTA  V    A PGPG  P+R W++ LS +Q+ D  VR  G+H+E+ES  +  AF LSF L S +  L+   LR
Sbjct:  435 QSSRLALLLVADFFLTNQLRTELQALYLHLLVDAHFKPALARSLTRCYALLNSLYSRGVGTQDDSLFSFSVQLYTTPSIVRWLATSTEDE----------------ELLGSPGLMRVLTEALLAAFRLAGWCD-------------GQPLSQG-------FWENPLLQHRRYAHLLRDMDYALQTEGTAAGVLR-QAYPGPGPRPLRAWVEALSMMQHADHMVRKTGTHLEFESTVWMQAFTLSFPLYSTSTTLIAHGLR 657          
BLAST of mRNA_Ecto-sp13_S_contig12743.2274.1 vs. uniprot
Match: A0A7S2SCJ2_9STRA (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SCJ2_9STRA)

HSP 1 Score: 110 bits (274), Expect = 7.200e-24
Identity = 94/290 (32.41%), Postives = 134/290 (46.21%), Query Frame = 0
Query:   76 SPLGVLVASDPMLAKPLRLSLHGLLMRLLVDQEFKRDFALAFARL-YEYLNSLYCKGVGVSDESIFGFSVQTFTTPSLVRLLADASAETPSAILPNP-DHGVPKVWRFSETPGLLAL-------LAKALVRTMWDAGCRECGREGG-REAVIAAQQPGPRGAAR-------------GEN------------AFLEHDITNHRRFVHVFRDLEYALQSPGTALDVATLAANPGPGSEPIRLWLKVLSALQYMDTNVRWI-GSHIEYESRRFYGAFGLSFSLASVTDALVD 329
            SPL +L+  DP   K LR++ H L + LL+D  FK  FA +   + Y  L++L+C GVG   ++   F+VQ FT  SLVR L   SA+    +L N  D   P     SET     +       +A+ +VR      C      G  +E  +  +  G   ++              GEN             +L+   T H+R  H++RDLEY  ++PGTAL +  L  N       I  W ++L   Q MD   R I G H+EYE  R+  AFGLS ++ S  DAL +
Sbjct:   61 SPLMLLLLMDPYPTKQLRVATHTLFLSLLIDSRFKSRFAASLGGVAYRPLSTLFCAGVGTEADTPLSFTVQIFTAGSLVRALC--SADAMKKLLSNESDTNAPPSLPTSETSTKNVMDDVYTIAIAQTVVR------CIHTNLLGATKEVKMVLKHTGDTLSSNNNDGLQSALTYQIGENPLLTLLPAAPDDCYLDSRSTRHKRLPHLYRDLEYIFETPGTALRL--LLQNDTDTLSFIPAWCRLLRLTQGMDPQKRKINGGHVEYEQNRWLEAFGLSLNITSARDALAE 340          
BLAST of mRNA_Ecto-sp13_S_contig12743.2274.1 vs. uniprot
Match: A0A7S1VIH2_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VIH2_9STRA)

HSP 1 Score: 110 bits (275), Expect = 7.670e-23
Identity = 92/294 (31.29%), Postives = 129/294 (43.88%), Query Frame = 0
Query:   76 SPLGVLVASDPMLAKPLRLSLHGLLMRLLVDQEFKRDFALAFARL-YEYLNSLYCKGVGVSDESIFGFSVQTFTTPSLVRLLADASA-------ETPSAILPNPDHGV---PKVWRFSETPGLLALLAKALVRTMWDAGCRECGREGGREAVIAAQQPGPRGA---------------ARGENAFLEHDITNHRRFVHVFRDLEYALQSPGTALDVATLAANP----GPGSEPIR-----------LWLKVLSALQYMDTNVRWI-GSHIEYESRRFYGAFGLSFSLASVTDAL 327
            SP+ +++  DP   K +R +LH L + LL+D  FK  FA A   + Y  L++L+C GVG   ++  GF+VQ FT  SLVR L  +SA       +  S   P P  G+   P             L A   VR +          E   +  +  Q      A               A  ++ FL+   T H+R  H+ RDLEY +++PGTAL +    A P      GS P             ++ ++L   Q MD   R I G H+EYE  R+  AFGLS + A   DAL
Sbjct:  311 SPVVLMLLLDPYPTKQVRTALHSLFLSLLIDARFKCRFAAALGAVAYRPLSTLFCAGVGTESDTPLGFTVQIFTAGSLVRALGSSSAIEKLLKSDMESGASPGPSIGIFAMPIAHSIVRCIHTNLLGASKEVRMLLKNTVTRNDEESSEDLALRLQNNSLLPALTYNAGEHPMCVLLPAAPDDGFLDSRSTRHKRLPHLLRDLEYVMETPGTALRLMLPLAYPYFPRSGGSAPATPLLENLLPFATVYSRMLRMAQGMDPQKRKISGGHVEYEQNRWLDAFGLSLNFAGTRDAL 604          
BLAST of mRNA_Ecto-sp13_S_contig12743.2274.1 vs. uniprot
Match: A0A448ZCJ2_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZCJ2_9STRA)

HSP 1 Score: 107 bits (268), Expect = 6.060e-22
Identity = 87/285 (30.53%), Postives = 126/285 (44.21%), Query Frame = 0
Query:   76 SPLGVLVASDPMLAKPLRLSLHGLLMRLLVDQEFKRDFALAFARLYEYLNSLYCKGVGVSDESIFGFSVQTFTTPSLVRLLADASAETPSAILPNPDHGVPKVWRFSETPGL----LALLAKALVRTMWDAGCRECGR---------------EGGREAVIAAQQPGPRGAARGENAFLEHDITNHRRFVHVFRDLEYALQSPGTALDVATLAANP--------GPGSEPIRL---WLKVLSALQYMDTNVRWI-GSHIEYESRRFYGAFGLSFSLASVTDALVD 329
            SP  +L+  DP   K LR ++H L + LL D  FK  FA A    Y  L++L+C GVG   ++  GF+VQ FT  SLVR L  A A   +A L   D      ++ S + G+    +AL     + T      +E                    G   ++      P      ++ +L+   T H+R  H+ RDLEY +++PGTA+ +      P          G E +     W ++L   Q MD   R   G H+EYE  R+  AFGLS + A   DAL +
Sbjct:  788 SPAILLLLLDPYPTKQLRGAIHSLFLSLLTDARFKCRFAAALGIAYRPLSTLFCAGVGTEADTPLGFTVQIFTAGSLVRALGSAPA---AAKLLLSDDERESAYQKSSSIGVFTVPIALTVVRCIHTNLLGATKEVHMILNNTANSCLAATTYVAGEHPIMTLLPTAP------DDGYLDSRSTRHKRLPHLLRDLEYVIETPGTAMRILLPKQFPPYRGMSLSSRGEEVLTFCTTWARLLRLAQGMDPQKRKTNGGHVEYEQSRWLEAFGLSLNFAGTRDALAE 1063          
BLAST of mRNA_Ecto-sp13_S_contig12743.2274.1 vs. uniprot
Match: A0A1Z5JKC4_FISSO (E3 ubiquitin-protein ligase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JKC4_FISSO)

HSP 1 Score: 103 bits (258), Expect = 1.260e-20
Identity = 98/310 (31.61%), Postives = 137/310 (44.19%), Query Frame = 0
Query:   76 SPLGVLVASDPMLAKPLRLSLHGLLMRLLVDQEFKRDFALAFARLYEYLNSLYCKGVGVSDESIFGFSVQTFTTPSLVRLLADASA--------ETPSAILPNPDHG--------VPKVWRF------SETPGLLALLAKALVRTMWDA------GCRECGREGGREAV--IAAQQPG----PRGAARGENAFLEHDITNHRRFVHVFRDLEYALQSPGTALDVATLAANP---GPG----SEPI----RLWLKVLSALQYMDTNVRWI-GSHIEYESRRFYGAFGLSFSLASVTDALVDRALRKASPNN 339
            SP+ +L+  DP   K LR SLH L + LL D  FK  FA A    Y  L +L+C GVG   +S   FSVQ FT  SLVR L   +A            ++ P   H         VP +         +   G    ++  L  T   +      G  + G +    A+  +A + P     P   A  ++ FL+   T H+R  H+ RDLEY +++PGTA  +      P   GP      E I     ++ ++L   Q MDT  R I G H+EYE  R+  AFGLS + A   DAL + A     P++
Sbjct:  717 SPIMLLLLFDPYPTKQLRGSLHVLFLSLLTDSRFKSRFAGALGVAYRPLCTLFCAGVGTEADSPLHFSVQIFTAGSLVRALCHRNAAEKLLLSDHLADSLSPEDSHQNESSIGVFVPPISHVIVRCVHTNLLGATQEISMILKNTFSGSDDNSIDGPLQLGNDNLLPALTYVAGEHPLLTLLP---AAHDDGFLDSRSTRHKRLPHILRDLEYVIETPGTATRLLLPHRFPTQYGPSLSLRGEDILSFASIFARMLRLAQGMDTQKRKISGGHVEYEQNRWLEAFGLSLNFAGTRDALAESACSSVDPSS 1023          
BLAST of mRNA_Ecto-sp13_S_contig12743.2274.1 vs. uniprot
Match: B7G3L2_PHATC (E3 ubiquitin-protein ligase n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G3L2_PHATC)

HSP 1 Score: 94.7 bits (234), Expect = 1.430e-17
Identity = 87/297 (29.29%), Postives = 128/297 (43.10%), Query Frame = 0
Query:   81 LVASDPMLAKPLRLSLHGLLMRLLVDQEFKRDFALAFARLYEYLNSLYCKGVGVSDESIFGFSVQTFTTPSLVRLLADASAETPSAILPNPD---HGVPKVWRFSETPGLLALLAKALVRTMWDAGCREC---------GREGGRE---------------AVIAAQQP--GPRGAARGENAFLEHDITNHRRFVHVFRDLEYALQSPGTALDVATLAANPGPGSEPIRL-----------WLKVLSALQYMDTNVRWI-GSHIEYESRRFYGAFGLSFSLASVTDALVDRALRKAS 336
            L+  DP   K +R ++H L++ LL D  FK   A A    Y  L++L+C GVG   +S   F+VQ FT  SLVR L    A     I  +P+   H    +  F+     +A      + T      +E          G +   E                 +A + P   P  AA  ++ FL+   T H+R  H+ RDLEY +++PGTA+ +      P     P+ +           + ++L   Q MD   R I G H+EYE  R+  AFGLS + A   DAL +   R +S
Sbjct:  889 LLLLDPYPTKQVRGAIHALILSLLTDARFKSRVAGALGVAYRPLSTLFCAGVGTEADSPLHFTVQIFTAGSLVRALGSGPATEALLISDDPNRAGHSEASIGVFTSP---IAHTIVRCIHTNLLGATKEVNMILNHTTSGTDDAEEDPVFQPSNDSLLPALTYVAGEHPLMTPLPAA-PDDGFLDSRSTRHKRLPHMLRDLEYVIETPGTAIRLLLPRRFPVYQGPPLSMRGEDVLAFPVVFSRMLRLAQGMDPQKRKISGGHVEYEHIRWLEAFGLSLNFAGARDALSESPPRSSS 1181          
BLAST of mRNA_Ecto-sp13_S_contig12743.2274.1 vs. uniprot
Match: A0A6S8VUG7_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A6S8VUG7_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 9.480e-17
Identity = 88/296 (29.73%), Postives = 130/296 (43.92%), Query Frame = 0
Query:   76 SPLGVLVASDPMLAKPLRLSLHGLLMRLLVDQEFKRDFALAFARL-YEYLNSLYCKGVGVSDESIFGFSVQTFTTPSLVRLLADASAETPSAILPNPDHGVPKVWRFSETPGLLAL-LAKALVRTMWD---AGCREC------------GREGG----------REAVIAAQQPGPRGA---ARGENAFLEHDITNHRRFVHVFRDLEYALQSPGTALDVATL--AANPGPGSEPIRLWLKVLSALQYMDTNVRW-IGSHIEYESRRFYGAFGLSFSLASVTDALVDRALRKASPN 338
            SPL +++  DP   K LR S+H L + LL D   +  FA +   + Y  L +L+C GVG   ++   F+VQ FT  S+VR L   S E    +L +   G  ++       G+  L LA  + R +       C+E               +GG            A++  Q   P         ++ FL+   T H+R  H+ RDLEY L++PGTA+ +       N         +W ++L   Q MD   R   G H+EYE  R+  AF LS   A   D L + +L  A+PN
Sbjct:  774 SPLLIMLLLDPYPTKQLRGSVHQLFLSLLTDSRLRTRFAASLGGIAYRSLTTLFCAGVGTEADTPLNFTVQIFTAGSIVRALC--SLEGTQKLLSS--DGKEEIDDSEGARGVFCLPLAHNIARCIHTNLLGACKEVQMVLKNTAAGKKSNDGGIFDHQSRNKLLPALVYQQGEQPLSTLLPTAPDDGFLDCRSTKHKRLPHLLRDLEYVLETPGTAMRLLLPDETENSHNAINFSTVWCRLLRLAQGMDPQKRKKSGGHVEYEQLRWLEAFSLSLHFAGARDKLAE-SLPNAAPN 1064          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12743.2274.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
A0A6H5K8R4_9PHAE2.910e-18396.01E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sp.... [more]
D7G3D3_ECTSI2.120e-16787.00E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sil... [more]
A0A836CB31_9STRA3.350e-4240.54E3 ubiquitin-protein ligase n=1 Tax=Tribonema minu... [more]
A0A4D9D1X7_9STRA4.980e-3737.31E3 ubiquitin-protein ligase n=6 Tax=Monodopsidacea... [more]
A0A7S2SCJ2_9STRA7.200e-2432.41E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Euc... [more]
A0A7S1VIH2_9STRA7.670e-2331.29E3 ubiquitin-protein ligase n=1 Tax=Grammatophora ... [more]
A0A448ZCJ2_9STRA6.060e-2230.53E3 ubiquitin-protein ligase n=1 Tax=Pseudo-nitzsch... [more]
A0A1Z5JKC4_FISSO1.260e-2031.61E3 ubiquitin-protein ligase n=2 Tax=Fistulifera so... [more]
B7G3L2_PHATC1.430e-1729.29E3 ubiquitin-protein ligase n=3 Tax=Phaeodactylum ... [more]
A0A6S8VUG7_9STRA9.480e-1729.73E3 ubiquitin-protein ligase n=1 Tax=Chaetoceros de... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039164E3 ubiquitin-protein ligase UBR1-likePANTHERPTHR21497UBIQUITIN LIGASE E3 ALPHA-RELATEDcoord: 37..323
NoneNo IPR availablePANTHERPTHR21497:SF24E3 UBIQUITIN-PROTEIN LIGASE UBR1coord: 37..323

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12743contigEcto-sp13_S_contig12743:749..4624 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12743.2274.1mRNA_Ecto-sp13_S_contig12743.2274.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12743 749..4624 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12743.2274.1 ID=prot_Ecto-sp13_S_contig12743.2274.1|Name=mRNA_Ecto-sp13_S_contig12743.2274.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=341bp
ADGGGGGGGGGAGNPPLYGPTSSQSLPETNQQQESRAPPPRHSSMFGLST
NLGYLWVSHTRAGGSKVVPYRVARDSPLGVLVASDPMLAKPLRLSLHGLL
MRLLVDQEFKRDFALAFARLYEYLNSLYCKGVGVSDESIFGFSVQTFTTP
SLVRLLADASAETPSAILPNPDHGVPKVWRFSETPGLLALLAKALVRTMW
DAGCRECGREGGREAVIAAQQPGPRGAARGENAFLEHDITNHRRFVHVFR
DLEYALQSPGTALDVATLAANPGPGSEPIRLWLKVLSALQYMDTNVRWIG
SHIEYESRRFYGAFGLSFSLASVTDALVDRALRKASPNNAA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039164UBR1-like