prot_Ecto-sp13_S_contig12734.2265.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12734.2265.1
Unique Nameprot_Ecto-sp13_S_contig12734.2265.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length687
Homology
BLAST of mRNA_Ecto-sp13_S_contig12734.2265.1 vs. uniprot
Match: A0A6H5LE45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LE45_9PHAE)

HSP 1 Score: 573 bits (1477), Expect = 1.160e-187
Identity = 523/688 (76.02%), Postives = 527/688 (76.60%), Query Frame = 0
Query:    1 MQSETARGGXXXXXVSPRILSQPSSPCFSAASHSSSACGGSPGRXXXXXXXXRHGSGFSYAHDDGRGGGSGPPGFPMDGRGSLRMDSDGAMHTTLSLRLSGDGGRSAADGXXXXXXXXXXXXXXXXX-FATAPAGGNISMGFPSSXXXXXXXXXXXXXXXXXXXRNSRGVIGGGSRSNGASPAMHGMSAPKSLHSSRSASRLIGGSAAGYYDDHGVRTGGSGLPHGASLLRPGSAGPPSRSASSSLMPLPPDDIV-TSSSFHELSSSGMAGGIRASMMARKSSYDERRVAPSWLDGRDGAAAPGGGGDASHAGVRGAISRPTDLSINHPYGGGGRDAAGDGASSDSARDASTWGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDMTAMRCAEFALLTPKRALEQQQRQQSSGLTTSLDMWASSSSPAGWASQXGGSAEARSSGARAVVTHAGSANSSSGGSGGPAVGSEVGSPEGPSASRVAGAXXXXXXXXXXXXXXXXXXXXXXXRQGSVRAAFGATLDSXXXXXXXXXXEAGIGGSAFDSSFPLRADGNSRRVNGSNGAXXXXXXXXGVEAQRYDSPLMKASSFFGDDLMGEALEDTGASLSSSMPENLNTLHHQXXXXXXXXXXXAFSTGASPSRGGSXXXXXXXTGGVVGMSSPGPLDGSSLAAALQNQLSF 686
            MQSETARGGXXXX VSPRILSQPSSPCFSAASHSSSACGGSP  XXXXXXXX HGSGFSYAHDDGRGGG GPPGFPMDGRGSLRMDSDGAMHTTLSLRLSGD GR AADGXXXXXXXXXXXXXXXXX FATAPAGGNISMGFPSSXXXXXXXXXXXXXXXXXXX     V    SRSNGASP MHGMSAPKSLHSSRSASRLIGGSAAGYYDDHGVRT                                      TSSSFHELS SGMAGGIRASMMARKSSYDERRV PSWLDGRDGAAAPGGGGDASHAGVRGAISRPTDL INHPYGGGGRDAAGDGASSD ARDASTWGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   TA  CAEFALLTPK                                 X                            GGPA+GSEVGSP+GPSASRVAGAXXXXXXXXXXXXXXXXXXXXXXXRQGSVRAAFGATLD XXXXXXXXXXEAGIGG AFDSSFPLRADG+SRR NGSNGAXXXXX   GVEAQRYDSPLMK SSFFG+DLMGEALEDTG SLSSSMPENLN LH  XXXXXXXXXXX             X         VVG SSPG LDGSSLAAALQNQLSF
Sbjct:  520 MQSETARGGXXXXGVSPRILSQPSSPCFSAASHSSSACGGSPXXXXXXXXXXXHGSGFSYAHDDGRGGGGGPPGFPMDGRGSLRMDSDGAMHTTLSLRLSGDFGRGAADGXXXXXXXXXXXXXXXXXGFATAPAGGNISMGFPSSXXXXXXXXXXXXXXXXXXXXX---VXXXXSRSNGASPTMHGMSAPKSLHSSRSASRLIGGSAAGYYDDHGVRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSSSFHELSISGMAGGIRASMMARKSSYDERRVTPSWLDGRDGAAAPGGGGDASHAGVRGAISRPTDLRINHPYGGGGRDAAGDGASSDGARDASTWGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---TATMCAEFALLTPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGPALGSEVGSPDGPSASRVAGAXXXXXXXXXXXXXXXXXXXXXXXRQGSVRAAFGATLDXXXXXXXXXXXEAGIGGGAFDSSFPLRADGDSRRANGSNGAXXXXXG--GVEAQRYDSPLMKTSSFFGEDLMGEALEDTGVSLSSSMPENLNNLHXXXXXXXXXXXXXXXXXXXXXXXXXXX---------VVGKSSPGSLDGSSLAAALQNQLSF 1190          
BLAST of mRNA_Ecto-sp13_S_contig12734.2265.1 vs. uniprot
Match: D7G0H4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0H4_ECTSI)

HSP 1 Score: 496 bits (1278), Expect = 7.190e-164
Identity = 471/640 (73.59%), Postives = 472/640 (73.75%), Query Frame = 0
Query:   53 RHGSGFSYAHDDGRGGGSGPPGFPMDGRGSLRMDSDGAMHTTLSLRLSGDGGRSAADGXXXXXXXXXXXXXXXXX--FATAPAGGNISMGFPSSXXXXXXXXXXXXXXXXXXXRNSRGVIGGGSRSNGASPAMHGMSAPKSLHSSRSASRLIGGSAAGYYDDHGVRTGGSG-LPHGASLLRPGSAGPPSRSASSSLMPLPPDDIVTSSSFHELSSSGMAGGIRASMMARKSSYDERRVAPSWLDGRDGAAAPGGGGDASHAGVRGAISRPTDLSINHPYGGGGRDAAGDGASSDSARDASTWGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDMTAMRCAEFALLTPKRALEQQQRQQS-SGLTTSLDMWASSSSPAGWASQXGGSAEARSSGARAVVTHAGSANSSSGGSGGPAVGSEVGSPEGPSASRVAGAXXXXXXXXXXXXXXXXXXXXXXXRQGSVRAAFGATLDSXXXXXXXXXX-EAGIGGSAFDSSFPLRADGNSRRVNGSNGAXXXXXXXXGVEAQRYDSPLMKASSFFGDDLMGEALEDTGASLSSSMPENLNTLHHQXXXXXXXXXXXAFSTGASPSRGGSXXXXXXXTGG-VVGMSSPGPLDGSSLAAALQNQLSF 686
            RHGSGFSYAHDDGRGGGSGPPGFPMDGRGSLRMDSDG MHTTLSLRLSGDGGR  ADG XXXXXXXXXXXXXXXX  FATAPAGGNISMGFPSS XXXXX   XXXXXXX             SRSNGASPAMHGMSAPKSLHSSRSASRLIGGSAAGYYDDHGVRTG    LPHGASLLRPGSAGP                      FHELSSSGMAG IRASMMARKSSYDERRVAPSWLDGRDGAAAPGGGGDASHAGVRGAISRPTDL INHPYGGGGRDAAGDGA  D ARDASTW AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                             SGLT SLDMW SS         X                                VGSEVGSPEGPSASRVAGAXXXXXXXXXXXXXXXXXXXXXXX               XXXXXXXXXX EA IGG  FDSSFPLRA G+SRRVNGSNGAXXXXXXX GVEAQRYDSPLMK SSFFGDDLMGEALEDTGASLSSSMPENLNTLHH XXXXXXXXXXX             XXXXXXX    VVG SSPGPLDGSSLAAALQNQLSF
Sbjct:   78 RHGSGFSYAHDDGRGGGSGPPGFPMDGRGSLRMDSDGTMHTTLSLRLSGDGGRGVADGGXXXXXXXXXXXXXXXXSGFATAPAGGNISMGFPSSGXXXXXSLHXXXXXXX-------------SRSNGASPAMHGMSAPKSLHSSRSASRLIGGSAAGYYDDHGVRTGXXXXLPHGASLLRPGSAGPXXXXXXXXXXXXXXXXXXXXXXFHELSSSGMAGSIRASMMARKSSYDERRVAPSWLDGRDGAAAPGGGGDASHAGVRGAISRPTDLRINHPYGGGGRDAAGDGAGIDGARDASTWAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGLTRSLDMWPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGSEVGSPEGPSASRVAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEACIGGGTFDSSFPLRAVGDSRRVNGSNGAXXXXXXX-GVEAQRYDSPLMKTSSFFGDDLMGEALEDTGASLSSSMPENLNTLHHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVGKSSPGPLDGSSLAAALQNQLSF 703          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12734.2265.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LE45_9PHAE1.160e-18776.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0H4_ECTSI7.190e-16473.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12734contigEcto-sp13_S_contig12734:585..2880 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12734.2265.1mRNA_Ecto-sp13_S_contig12734.2265.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12734 579..2880 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12734.2265.1 ID=prot_Ecto-sp13_S_contig12734.2265.1|Name=mRNA_Ecto-sp13_S_contig12734.2265.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=687bp
MQSETARGGGGGGGVSPRILSQPSSPCFSAASHSSSACGGSPGRSGRGGG
GGRHGSGFSYAHDDGRGGGSGPPGFPMDGRGSLRMDSDGAMHTTLSLRLS
GDGGRSAADGGGDDGGGGSFWGSSSSGFATAPAGGNISMGFPSSGGSSTG
SLHESSGGGGGGGRNSRGVIGGGSRSNGASPAMHGMSAPKSLHSSRSASR
LIGGSAAGYYDDHGVRTGGSGLPHGASLLRPGSAGPPSRSASSSLMPLPP
DDIVTSSSFHELSSSGMAGGIRASMMARKSSYDERRVAPSWLDGRDGAAA
PGGGGDASHAGVRGAISRPTDLSINHPYGGGGRDAAGDGASSDSARDAST
WGAVAAAAAGRGGNSGAAAAPAASAFAAGGGGGGGGGSSAAEDMTAMRCA
EFALLTPKRALEQQQRQQSSGLTTSLDMWASSSSPAGWASQSGGSAEARS
SGARAVVTHAGSANSSSGGSGGPAVGSEVGSPEGPSASRVAGAAGGGGAD
DADESNAASGGSGGGGRQGSVRAAFGATLDSAAGGGGGGGGEAGIGGSAF
DSSFPLRADGNSRRVNGSNGAGGNGNGNGGVEAQRYDSPLMKASSFFGDD
LMGEALEDTGASLSSSMPENLNTLHHQHHRSHHHPGGGAFSTGASPSRGG
SGGGGRGGTGGVVGMSSPGPLDGSSLAAALQNQLSF*
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