prot_Ecto-sp13_S_contig12731.2263.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12731.2263.1
Unique Nameprot_Ecto-sp13_S_contig12731.2263.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length180
Homology
BLAST of mRNA_Ecto-sp13_S_contig12731.2263.1 vs. uniprot
Match: A0A6H5KNQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ7_9PHAE)

HSP 1 Score: 304 bits (778), Expect = 5.590e-98
Identity = 162/181 (89.50%), Postives = 163/181 (90.06%), Query Frame = 0
Query:    2 SLGCTPPPAS--PRACRTYVSRPLTAVTGPPSREVFDPRVGLATAHLDSLGLMNGGGIGVGSSGSGVAAGRVLVAEAKLSGHTAAVYVAKFSPRDSLVASAGFDRTLRLWEGAYPYSQVACLEGHRQLISDLCWAPDGRSLLSASFDQTVAKWDTETGQRVGNMLSLEGLVQCVQVAAEGG 180
            S G  P  AS  P A R   S     VTGPPSREVFDPRVGLATAHLD+LGLMNGGGIGVGSSGSG AAGRVLVAEAKLSGHTAAVYVAKFSPRDSLVASAGFDRTLRLWEGAYPYSQVACLEGHRQLISDLCWAPDGRSLLSASFDQTVAKWDTETGQRVGNMLSLEGLVQCVQVAAEGG
Sbjct:   58 SAGSAPASASLAPAAARPGASTGGN-VTGPPSREVFDPRVGLATAHLDALGLMNGGGIGVGSSGSGFAAGRVLVAEAKLSGHTAAVYVAKFSPRDSLVASAGFDRTLRLWEGAYPYSQVACLEGHRQLISDLCWAPDGRSLLSASFDQTVAKWDTETGQRVGNMLSLEGLVQCVQVAAEGG 237          
BLAST of mRNA_Ecto-sp13_S_contig12731.2263.1 vs. uniprot
Match: A0A835YSR1_9STRA (WD40-repeat-containing domain protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSR1_9STRA)

HSP 1 Score: 114 bits (285), Expect = 1.170e-28
Identity = 69/151 (45.70%), Postives = 79/151 (52.32%), Query Frame = 0
Query:   29 PPSREVFDPRVGLATAHLDSLGLMNGGGIGVGSSGSGVAAGRVLVAEAKLSGHTAAVYVAKFSPRDSLVASAGFDRTLRLWEGAYPYSQVACLEGHRQLISDLCWAPDGRSLLSASFDQTVAKWDTETGQRVGNMLSLEGLVQCVQVAAEG 179
            PPSR    P     +AH               + G+  A  R L    KL GHTAAVY   FSP  +LVAS GFDRT+RLWEG YP+SQVACL  HRQL+SD                      DTETGQRV N+L LEG++QCV  A  G
Sbjct:   43 PPSRPGHPPSPFKVSAH---------------AHGASAAPDRRLNPAGKLVGHTAAVYAVAFSPCGNLVASGGFDRTVRLWEGGYPHSQVACLAEHRQLVSDXXXXXXXXXXXXXXXXXXXXXXDTETGQRVNNVLRLEGMLQCVSYADGG 178          
BLAST of mRNA_Ecto-sp13_S_contig12731.2263.1 vs. uniprot
Match: D7FIJ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIJ7_ECTSI)

HSP 1 Score: 86.7 bits (213), Expect = 2.690e-18
Identity = 44/53 (83.02%), Postives = 49/53 (92.45%), Query Frame = 0
Query:   26 VTGPPSREVFDPRVGLATAHLDSLGLMNGGGIGVGSSGSGVAAGRVLVAEAKL 78
            VTGPPSR+VFDPRVG+ATAHLDSLGLMNGGGI VGS+G  + AGR+LVAEAKL
Sbjct:   83 VTGPPSRKVFDPRVGIATAHLDSLGLMNGGGIRVGSNGIRIPAGRILVAEAKL 135          
BLAST of mRNA_Ecto-sp13_S_contig12731.2263.1 vs. uniprot
Match: A0A1V8SS61_9PEZI (Uncharacterized protein n=4 Tax=Rachicladosporium TaxID=470018 RepID=A0A1V8SS61_9PEZI)

HSP 1 Score: 89.0 bits (219), Expect = 9.760e-18
Identity = 45/136 (33.09%), Postives = 78/136 (57.35%), Query Frame = 0
Query:   44 AHLDSLGLMNGGGIGVGSSGSGVAAGRVLVAEAKLSGHTAAVYVAKFSPRDSLVASAGFDRTLRLWEGAYPYSQVACLEGHRQLISDLCWAPDGRSLLSASFDQTVAKWDTETGQRVGNMLSLEGLVQCVQVAAEG 179
            A+ + +  +NGGG      G G A+G +  +  +++GH+A ++ A+FSP  + +ASAG DR + LW  +   +    L GH+  + DL W+ D + + SAS D  +A W+ ETG+R+   +  E ++ C+ V+  G
Sbjct:   23 ANSNEVAKVNGGGSNALIYGGGRASG-LQASVMEMTGHSAEIFAARFSPSGAHIASAGADRDILLWHSSGDCANYGTLVGHKSAVLDLHWSRDSQVIYSASADMHIASWNVETGERIRRHVGHEEVINCIDVSKRG 157          
BLAST of mRNA_Ecto-sp13_S_contig12731.2263.1 vs. uniprot
Match: A0A1V9Z1V2_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z1V2_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 1.110e-17
Identity = 49/106 (46.23%), Postives = 66/106 (62.26%), Query Frame = 0
Query:   70 RVLVAEAKLSGHTAAVYVAKFSPRDSLVASAGFDRTLRLWEGAYPYSQ--VACLEGHRQLISDLCWAPDGRSLLSASFDQTVAKWDTETGQRVGNMLSLEGLVQCV 173
            RVL  +++L GH  AVY  KFSP   L+AS   D  + LW+    ++Q  +A L  H QL+ D+ W+ D RSLLSAS+D TV  WDT+ GQ + N + + GLVQ V
Sbjct:  107 RVLYQKSELRGHGGAVYTTKFSPCGRLLASGSLDCRVLLWDITTKFNQQQLASLASHNQLVIDMSWSNDSRSLLSASYDHTVNLWDTDKGQLL-NSIGVNGLVQTV 211          
BLAST of mRNA_Ecto-sp13_S_contig12731.2263.1 vs. uniprot
Match: T0QW05_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QW05_SAPDV)

HSP 1 Score: 80.5 bits (197), Expect = 1.970e-14
Identity = 45/92 (48.91%), Postives = 57/92 (61.96%), Query Frame = 0
Query:   84 AVYVAKFSPRDSLVASAGFDRTLRLWEGAYPYSQ--VACLEGHRQLISDLCWAPDGRSLLSASFDQTVAKWDTETGQRVGNMLSLEGLVQCV 173
            AVY  KFSP   L+AS   D  + LW+    ++Q  +A L  H QLI D+ W+ D RSLLSAS+D TV  WDT+ GQ V N + + GLVQ V
Sbjct:  134 AVYTTKFSPCGRLLASGSLDCRVLLWDITTKFNQQQLASLTQHNQLIIDISWSNDSRSLLSASYDHTVNLWDTDKGQLV-NSVGVNGLVQTV 224          
BLAST of mRNA_Ecto-sp13_S_contig12731.2263.1 vs. uniprot
Match: A0A1A0HJF3_9ASCO (Uncharacterized protein n=1 Tax=Metschnikowia bicuspidata var. bicuspidata NRRL YB-4993 TaxID=869754 RepID=A0A1A0HJF3_9ASCO)

HSP 1 Score: 72.8 bits (177), Expect = 5.570e-12
Identity = 44/106 (41.51%), Postives = 58/106 (54.72%), Query Frame = 0
Query:   78 LSGHTAAVYVAKFSPRDSLVASAGFDRTLRLWEGAYPYSQVA----CLEGHRQLISDLCWAPDGRSLLSASFDQTVAKWDTETGQRVGNMLSLEGLVQCVQVAAEG 179
            LSGHT AV+  +FS     +ASAG DRT+RLW         A     +EGH++ I+ L W    + +LSAS D TV+ WD ETGQR+      E  V     ++EG
Sbjct:   24 LSGHTGAVFSIEFSADGHNIASAGMDRTIRLWNLPTTADNEAPNYGVIEGHKKAITSLSWILSSK-ILSASADSTVSVWDAETGQRLKTGKGHELTVNDCSTSSEG 128          
BLAST of mRNA_Ecto-sp13_S_contig12731.2263.1 vs. uniprot
Match: A9V9T1_MONBE (Lactoylglutathione lyase n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V9T1_MONBE)

HSP 1 Score: 70.5 bits (171), Expect = 6.520e-11
Identity = 35/84 (41.67%), Postives = 46/84 (54.76%), Query Frame = 0
Query:   77 KLSGHTAAVYVAKFSPRDSLVASAGFDRTLRLWEGAYPYSQVACLEGHRQLISDLCWAPDGRSLLSASFDQTVAKWDTETGQRV 160
            +L GH  AVY   FSP   ++A+AGFDR + +W        +  L+GH   +  L WA     L S S D+TVA WD  TG+RV
Sbjct:   73 RLEGHAEAVYAGTFSPSGHMLATAGFDRNVYVWNTFGNCENIMSLQGHTGAVLGLHWAKLENRLFSCSSDKTVAVWDGNTGERV 156          
BLAST of mRNA_Ecto-sp13_S_contig12731.2263.1 vs. uniprot
Match: A0A512UMM7_9ASCO (Uncharacterized protein n=1 Tax=Metschnikowia sp. JCM 33374 TaxID=2562755 RepID=A0A512UMM7_9ASCO)

HSP 1 Score: 69.3 bits (168), Expect = 9.710e-11
Identity = 38/87 (43.68%), Postives = 53/87 (60.92%), Query Frame = 0
Query:   78 LSGHTAAVYVAKFSPRDSLVASAGFDRTLRLWEGAYPYSQVA----CLEGHRQLISDLCWAPDGRSLLSASFDQTVAKWDTETGQRV 160
            LSGH+ AV+  KFSP    +ASAG DRT+RLW      ++ +     +EGH+  ++ L W    + +LS S D TV+ WD ETGQR+
Sbjct:   24 LSGHSGAVFSVKFSPDGQHIASAGTDRTIRLWNLPTRANEESPNYGVIEGHKGGLTALSWLSQSK-ILSTSADSTVSIWDAETGQRL 109          
BLAST of mRNA_Ecto-sp13_S_contig12731.2263.1 vs. uniprot
Match: A0A4P6XGR8_9ASCO (Prp8 binding protein n=1 Tax=Metschnikowia aff. pulcherrima TaxID=2163413 RepID=A0A4P6XGR8_9ASCO)

HSP 1 Score: 67.8 bits (164), Expect = 3.600e-10
Identity = 37/87 (42.53%), Postives = 47/87 (54.02%), Query Frame = 0
Query:   78 LSGHTAAVYVAKFSPRDSLVASAGFDRTLRLW----EGAYPYSQVACLEGHRQLISDLCWAPDGRSLLSASFDQTVAKWDTETGQRV 160
            LSGH  A    KFSP    +ASAG DRT+RLW    +          +EGH+  ++ L W    + + + S D TVA WD ETGQRV
Sbjct:   33 LSGHEGAALCVKFSPDGQNIASAGLDRTIRLWNLPTDAKDEVPNYGVIEGHKGAVTCLDWLAQSK-IFTGSADSTVAFWDAETGQRV 118          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12731.2263.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KNQ7_9PHAE5.590e-9889.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YSR1_9STRA1.170e-2845.70WD40-repeat-containing domain protein (Fragment) n... [more]
D7FIJ7_ECTSI2.690e-1883.02Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A1V8SS61_9PEZI9.760e-1833.09Uncharacterized protein n=4 Tax=Rachicladosporium ... [more]
A0A1V9Z1V2_9STRA1.110e-1746.23Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
T0QW05_SAPDV1.970e-1448.91Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A1A0HJF3_9ASCO5.570e-1241.51Uncharacterized protein n=1 Tax=Metschnikowia bicu... [more]
A9V9T1_MONBE6.520e-1141.67Lactoylglutathione lyase n=1 Tax=Monosiga brevicol... [more]
A0A512UMM7_9ASCO9.710e-1143.68Uncharacterized protein n=1 Tax=Metschnikowia sp. ... [more]
A0A4P6XGR8_9ASCO3.600e-1042.53Prp8 binding protein n=1 Tax=Metschnikowia aff. pu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 114..153
e-value: 4.1E-7
score: 39.6
coord: 71..110
e-value: 2.5E-6
score: 37.0
IPR001680WD40 repeatPFAMPF00400WD40coord: 118..153
e-value: 3.4E-4
score: 21.4
coord: 77..109
e-value: 3.5E-4
score: 21.3
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 121..162
score: 14.452
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 78..110
score: 13.951
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 67..180
e-value: 1.9E-26
score: 94.8
NoneNo IPR availablePANTHERPTHR44129:SF8coord: 73..174
NoneNo IPR availablePANTHERPTHR44129FAMILY NOT NAMEDcoord: 73..174
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 97..111
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 78..162
score: 21.542
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 77..175

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12731contigEcto-sp13_S_contig12731:2692..3926 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12731.2263.1mRNA_Ecto-sp13_S_contig12731.2263.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12731 2692..3928 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12731.2263.1 ID=prot_Ecto-sp13_S_contig12731.2263.1|Name=mRNA_Ecto-sp13_S_contig12731.2263.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=180bp
FSLGCTPPPASPRACRTYVSRPLTAVTGPPSREVFDPRVGLATAHLDSLG
LMNGGGIGVGSSGSGVAAGRVLVAEAKLSGHTAAVYVAKFSPRDSLVASA
GFDRTLRLWEGAYPYSQVACLEGHRQLISDLCWAPDGRSLLSASFDQTVA
KWDTETGQRVGNMLSLEGLVQCVQVAAEGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf