prot_Ecto-sp13_S_contig12731.2262.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12731.2262.1
Unique Nameprot_Ecto-sp13_S_contig12731.2262.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length67
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12731.2262.1 vs. uniprot
Match: A0A6H5L6W0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6W0_9PHAE)

HSP 1 Score: 52.0 bits (123), Expect = 4.430e-6
Identity = 29/42 (69.05%), Postives = 31/42 (73.81%), Query Frame = 0 
Query:   24 GATLKVKFRAGDIGLRERRRRFRKVGDE--SSNVIATPRAKT 63
            G  LKVKFR GD+GLRERRRR R V D+  SSNVIA   AKT
Sbjct:  470 GTKLKVKFRTGDMGLRERRRRHRTVDDKTTSSNVIAASNAKT 511
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BLAST of mRNA_Ecto-sp13_S_contig12731.2262.1 vs. uniprot
Match: A0A6H5KQC6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQC6_9PHAE)

HSP 1 Score: 50.8 bits (120), Expect = 1.130e-5
Identity = 29/45 (64.44%), Postives = 30/45 (66.67%), Query Frame = 0 
Query:   24 GATLKVKFRAGDIGLRERRRRFRKVGDESSN--VIATPRAKTGFM 66
            G  LKVKFR GDIGLRERRRR R V +E     VIA   AKT FM
Sbjct:  617 GTKLKVKFRTGDIGLRERRRRHRTVDEEDDEFTVIAGSNAKTVFM 661
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12731.2262.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L6W0_9PHAE4.430e-669.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KQC6_9PHAE1.130e-564.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12731contigEcto-sp13_S_contig12731:1144..1478 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12731.2262.1mRNA_Ecto-sp13_S_contig12731.2262.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12731 1144..1645 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12731.2262.1 ID=prot_Ecto-sp13_S_contig12731.2262.1|Name=mRNA_Ecto-sp13_S_contig12731.2262.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=67bp
GAPFQPQHRQALHLRQQALVHQRGATLKVKFRAGDIGLRERRRRFRKVGD
ESSNVIATPRAKTGFM*
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