prot_Ecto-sp13_S_contig12728.2257.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12728.2257.1
Unique Nameprot_Ecto-sp13_S_contig12728.2257.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length135
Homology
BLAST of mRNA_Ecto-sp13_S_contig12728.2257.1 vs. uniprot
Match: D7FWP4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWP4_ECTSI)

HSP 1 Score: 264 bits (675), Expect = 2.340e-89
Identity = 133/138 (96.38%), Postives = 133/138 (96.38%), Query Frame = 0
Query:    1 MGGVPRGTCCVGPGGLSSPAPVVRLIPSVK----MVNVPKERRTYCKDKRCNKHTVHKVTQYKSGKASNFAQGKRRYDHKQRGFGGQTKPIFHKKAKTTKKVTLRLECKLCKAKKQLVIARCKHFELGEKKQATGHQY 134
            M GVPRGTCCVGPGGLSSPAPVVRLIPSVK    MVNVPKERRTYCKDKRCNKHTVHKVTQYKSGKASNFAQGKRRYDHKQRGFGGQTKPIFHKKAKTTKKVTLRLECKLCKAKKQLVIARCKHFELGEKKQATGHQY
Sbjct:    1 MAGVPRGTCCVGPGGLSSPAPVVRLIPSVKDQEEMVNVPKERRTYCKDKRCNKHTVHKVTQYKSGKASNFAQGKRRYDHKQRGFGGQTKPIFHKKAKTTKKVTLRLECKLCKAKKQLVIARCKHFELGEKKQATGHQY 138          
BLAST of mRNA_Ecto-sp13_S_contig12728.2257.1 vs. uniprot
Match: A0A835YP36_9STRA (Zinc-binding ribosomal protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP36_9STRA)

HSP 1 Score: 191 bits (485), Expect = 7.200e-61
Identity = 93/104 (89.42%), Postives = 98/104 (94.23%), Query Frame = 0
Query:   31 MVNVPKERRTYCKDKRCNKHTVHKVTQYKSGKASNFAQGKRRYDHKQRGFGGQTKPIFHKKAKTTKKVTLRLECKLCKAKKQLVIARCKHFELGEKKQATGHQY 134
            MVNVPKERRTYCK K+C KHTVHKV+QYKSGKASNFAQGKRRYD KQ+G+GGQTKPIFHKKAKTTKKVTLRLECK CKAKKQLVI RCKHFELGEKK+ATGH Y
Sbjct:    1 MVNVPKERRTYCKSKKCGKHTVHKVSQYKSGKASNFAQGKRRYDSKQKGYGGQTKPIFHKKAKTTKKVTLRLECKECKAKKQLVIKRCKHFELGEKKKATGHVY 104          
BLAST of mRNA_Ecto-sp13_S_contig12728.2257.1 vs. uniprot
Match: A0A7S2UXA0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXA0_9STRA)

HSP 1 Score: 185 bits (470), Expect = 1.390e-58
Identity = 89/104 (85.58%), Postives = 96/104 (92.31%), Query Frame = 0
Query:   31 MVNVPKERRTYCKDKRCNKHTVHKVTQYKSGKASNFAQGKRRYDHKQRGFGGQTKPIFHKKAKTTKKVTLRLECKLCKAKKQLVIARCKHFELGEKKQATGHQY 134
            MVNVPKERRTYCK K CNKHT+HKVTQYK+GKASNFAQGKRRYDHKQ+G+GGQTKPIFHKKAKTTKK+ LRLECK CK KKQLVI R KHFELGEKK++TG QY
Sbjct:    1 MVNVPKERRTYCKAKNCNKHTIHKVTQYKAGKASNFAQGKRRYDHKQKGYGGQTKPIFHKKAKTTKKIVLRLECKECKTKKQLVIKRTKHFELGEKKKSTGPQY 104          
BLAST of mRNA_Ecto-sp13_S_contig12728.2257.1 vs. uniprot
Match: F0YGF9_AURAN (RL44_PICJA 60S ribosomal protein L44 n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0YGF9_AURAN)

HSP 1 Score: 184 bits (468), Expect = 2.810e-58
Identity = 89/104 (85.58%), Postives = 94/104 (90.38%), Query Frame = 0
Query:   31 MVNVPKERRTYCKDKRCNKHTVHKVTQYKSGKASNFAQGKRRYDHKQRGFGGQTKPIFHKKAKTTKKVTLRLECKLCKAKKQLVIARCKHFELGEKKQATGHQY 134
            MVNVPKER+TYCK K+C KHT HKVTQYK+GKASNFAQGKRRYD KQ GFGGQTKP+FHKKAKTTKKVTLRLECK CKAKKQL I RCKHFELGEKK+ TGH Y
Sbjct:    1 MVNVPKERKTYCKAKKCRKHTTHKVTQYKAGKASNFAQGKRRYDMKQMGFGGQTKPVFHKKAKTTKKVTLRLECKECKAKKQLTIKRCKHFELGEKKKTTGHTY 104          
BLAST of mRNA_Ecto-sp13_S_contig12728.2257.1 vs. uniprot
Match: A0A7S1TR78_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TR78_9STRA)

HSP 1 Score: 181 bits (459), Expect = 9.060e-57
Identity = 85/105 (80.95%), Postives = 95/105 (90.48%), Query Frame = 0
Query:   30 KMVNVPKERRTYCKDKRCNKHTVHKVTQYKSGKASNFAQGKRRYDHKQRGFGGQTKPIFHKKAKTTKKVTLRLECKLCKAKKQLVIARCKHFELGEKKQATGHQY 134
            KMVNVPKERR+YCK+K+C  H VHKVTQYKSGKASNFAQGKRRYD+KQ G+GGQTKPIFHKKAKTTKK+TLRLECK CK K  LV+ RCKHFE+GEKK+ +GHQY
Sbjct:   10 KMVNVPKERRSYCKNKKCKNHQVHKVTQYKSGKASNFAQGKRRYDNKQMGYGGQTKPIFHKKAKTTKKITLRLECKKCKTKTHLVVKRCKHFEIGEKKKPSGHQY 114          
BLAST of mRNA_Ecto-sp13_S_contig12728.2257.1 vs. uniprot
Match: A0A7R9UFU1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFU1_9STRA)

HSP 1 Score: 179 bits (454), Expect = 3.820e-56
Identity = 84/104 (80.77%), Postives = 92/104 (88.46%), Query Frame = 0
Query:   31 MVNVPKERRTYCKDKRCNKHTVHKVTQYKSGKASNFAQGKRRYDHKQRGFGGQTKPIFHKKAKTTKKVTLRLECKLCKAKKQLVIARCKHFELGEKKQATGHQY 134
            MVNVPKERRTYCK   C +H +HKVTQYKSGKASNFAQGKRRYDHKQ G+GGQTKPIFHKKAKTTKK+TLRLECK CK+K  LV+ RCKHFE+GEKK+  GHQY
Sbjct:    1 MVNVPKERRTYCKSPICRRHELHKVTQYKSGKASNFAQGKRRYDHKQMGYGGQTKPIFHKKAKTTKKITLRLECKKCKSKSHLVVKRCKHFEIGEKKKTAGHQY 104          
BLAST of mRNA_Ecto-sp13_S_contig12728.2257.1 vs. uniprot
Match: W7TXG3_9STRA (60s ribosomal protein l44 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TXG3_9STRA)

HSP 1 Score: 178 bits (452), Expect = 7.700e-56
Identity = 86/104 (82.69%), Postives = 95/104 (91.35%), Query Frame = 0
Query:   31 MVNVPKERRTYCKDKRCNKHTVHKVTQYKSGKASNFAQGKRRYDHKQRGFGGQTKPIFHKKAKTTKKVTLRLECKLCKAKKQLVIARCKHFELGEKKQATGHQY 134
            MV +PKER+T+CK K+C KHTVHKVTQYK+GKASN+AQGKRRYD KQ+G+GGQTKPI HKKAKTTKKVTLRLECK CK KKQLVI R KHFELGEKK+ATGHQY
Sbjct:    1 MVCIPKERKTFCKGKKCKKHTVHKVTQYKAGKASNYAQGKRRYDRKQQGYGGQTKPILHKKAKTTKKVTLRLECKECKTKKQLVIKRTKHFELGEKKKATGHQY 104          
BLAST of mRNA_Ecto-sp13_S_contig12728.2257.1 vs. uniprot
Match: A0A7S3NIT2_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NIT2_9STRA)

HSP 1 Score: 178 bits (451), Expect = 1.060e-55
Identity = 87/100 (87.00%), Postives = 93/100 (93.00%), Query Frame = 0
Query:   31 MVNVPKERRTYCKDKRCNKHTVHKVTQYKSGKASNFAQGKRRYDHKQRGFGGQTKPIFHKKAKTTKKVTLRLECKLCKAKKQLVIARCKHFELGEKKQAT 130
            MVNVPKERRTYCK K+C KHTVHKVTQYK+GKASNFAQGKRRYD KQ+G+GGQTKPIFHKKAKTTKKV LRLECK CKAKKQL I RCKHFELGEKK++T
Sbjct:    1 MVNVPKERRTYCKGKKCKKHTVHKVTQYKAGKASNFAQGKRRYDAKQQGYGGQTKPIFHKKAKTTKKVVLRLECKECKAKKQLCIKRCKHFELGEKKKST 100          
BLAST of mRNA_Ecto-sp13_S_contig12728.2257.1 vs. uniprot
Match: I6ZGD0_9STRA (Ribosomal protein L44 n=1 Tax=Aurantiochytrium sp. KRS101 TaxID=797128 RepID=I6ZGD0_9STRA)

HSP 1 Score: 177 bits (448), Expect = 3.140e-55
Identity = 85/104 (81.73%), Postives = 94/104 (90.38%), Query Frame = 0
Query:   31 MVNVPKERRTYCKDKRCNKHTVHKVTQYKSGKASNFAQGKRRYDHKQRGFGGQTKPIFHKKAKTTKKVTLRLECKLCKAKKQLVIARCKHFELGEKKQATGHQY 134
            MVNVPKERRT+CK K+C KHTVHKVTQYK+GKASNFAQGKRRYD KQ+G+GGQTKPIFHKKAKTTKKVTLRLECK CK K Q+ + RCK FELG+KK+A GHQY
Sbjct:    1 MVNVPKERRTFCKGKQCRKHTVHKVTQYKAGKASNFAQGKRRYDRKQKGYGGQTKPIFHKKAKTTKKVTLRLECKECKTKCQIGLKRCKTFELGQKKEAAGHQY 104          
BLAST of mRNA_Ecto-sp13_S_contig12728.2257.1 vs. uniprot
Match: A0A485LSL1_9STRA (Aste57867_25253 protein n=7 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485LSL1_9STRA)

HSP 1 Score: 176 bits (446), Expect = 6.320e-55
Identity = 83/104 (79.81%), Postives = 95/104 (91.35%), Query Frame = 0
Query:   31 MVNVPKERRTYCKDKRCNKHTVHKVTQYKSGKASNFAQGKRRYDHKQRGFGGQTKPIFHKKAKTTKKVTLRLECKLCKAKKQLVIARCKHFELGEKKQATGHQY 134
            MVN+PKERRT+CK K+C KHTVHKVTQYK+GKAS FAQG RRY+ KQ+GFGGQTKP+FHKKAKTTKK+TLR+ECK CKAKKQL I R KHFELGEKK+++GHQY
Sbjct:    1 MVNIPKERRTFCKGKKCRKHTVHKVTQYKAGKASKFAQGARRYNEKQQGFGGQTKPVFHKKAKTTKKITLRMECKECKAKKQLPIKRTKHFELGEKKKSSGHQY 104          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12728.2257.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWP4_ECTSI2.340e-8996.38Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YP36_9STRA7.200e-6189.42Zinc-binding ribosomal protein n=1 Tax=Tribonema m... [more]
A0A7S2UXA0_9STRA1.390e-5885.58Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
F0YGF9_AURAN2.810e-5885.58RL44_PICJA 60S ribosomal protein L44 n=2 Tax=Pelag... [more]
A0A7S1TR78_9STRA9.060e-5780.95Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7R9UFU1_9STRA3.820e-5680.77Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
W7TXG3_9STRA7.700e-5682.6960s ribosomal protein l44 n=2 Tax=Monodopsidaceae ... [more]
A0A7S3NIT2_9STRA1.060e-5587.00Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
I6ZGD0_9STRA3.140e-5581.73Ribosomal protein L44 n=1 Tax=Aurantiochytrium sp.... [more]
A0A485LSL1_9STRA6.320e-5579.81Aste57867_25253 protein n=7 Tax=Saprolegniaceae Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.450.80coord: 31..134
e-value: 2.2E-46
score: 158.6
NoneNo IPR availablePANTHERPTHR10369:SF34coord: 20..131
NoneNo IPR availablePRODOMPD002841coord: 40..123
e-value: 2.0E-32
score: 341.0
IPR000552Ribosomal protein L44ePFAMPF00935Ribosomal_L44coord: 49..124
e-value: 7.3E-33
score: 112.9
IPR000552Ribosomal protein L44ePANTHERPTHR1036960S RIBOSOMAL PROTEIN L36A/L44coord: 20..131
IPR000552Ribosomal protein L44ePROSITEPS01172RIBOSOMAL_L44Ecoord: 93..104
IPR011332Zinc-binding ribosomal proteinSUPERFAMILY57829Zn-binding ribosomal proteinscoord: 32..125

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12728contigEcto-sp13_S_contig12728:403..3184 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12728.2257.1mRNA_Ecto-sp13_S_contig12728.2257.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12728 403..3184 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12728.2257.1 ID=prot_Ecto-sp13_S_contig12728.2257.1|Name=mRNA_Ecto-sp13_S_contig12728.2257.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=135bp
MGGVPRGTCCVGPGGLSSPAPVVRLIPSVKMVNVPKERRTYCKDKRCNKH
TVHKVTQYKSGKASNFAQGKRRYDHKQRGFGGQTKPIFHKKAKTTKKVTL
RLECKLCKAKKQLVIARCKHFELGEKKQATGHQY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000552Ribosomal_L44e
IPR011332Ribosomal_zn-bd