prot_Ecto-sp13_S_contig12725.2254.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12725.2254.1
Unique Nameprot_Ecto-sp13_S_contig12725.2254.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length221
Homology
BLAST of mRNA_Ecto-sp13_S_contig12725.2254.1 vs. uniprot
Match: A0A6H5KH83_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH83_9PHAE)

HSP 1 Score: 401 bits (1031), Expect = 4.160e-138
Identity = 208/220 (94.55%), Postives = 210/220 (95.45%), Query Frame = 0
Query:    1 QYQALRRQQVGRGRGLPPALADLVYGAMAAFTATLVTYPLDIARTALAFQGVPKRYNSMSEFLRRTTRESGVRGLFRGATPTLAMITPQMGVSFAVWEALKGGAPPAFSGSGSGASPAATLSWQLGAGMVAGMVGKLVVFPLDTVKKRVQTAVMVERNSAYGVLPKYVGPVHALKTVLREEGAAALFRGTVPAMWKTGVSTAVTYAVYEWVREGTAVALD 220
            QYQALRRQQ GRGRGLPPALA+ VYGAMAAFTATLVTYPLDI RTALAFQGVPKRYNSMSEFLRRT RESGVRGLFRGATPTLAMITPQMGVSFAVWEAL GGAP AFSGSGSGASPAATLSWQLGAGMVAGMVGKLVVFPLDTVKKRVQTAVM+ERNS YGVLPKY GPVHA KTVLREEGAAALFRGTVPAMWKTGVSTAVTYAVYEWVR GTAVALD
Sbjct:  183 QYQALRRQQDGRGRGLPPALANFVYGAMAAFTATLVTYPLDITRTALAFQGVPKRYNSMSEFLRRTARESGVRGLFRGATPTLAMITPQMGVSFAVWEALTGGAPRAFSGSGSGASPAATLSWQLGAGMVAGMVGKLVVFPLDTVKKRVQTAVMMERNSTYGVLPKYAGPVHAFKTVLREEGAAALFRGTVPAMWKTGVSTAVTYAVYEWVRVGTAVALD 402          
BLAST of mRNA_Ecto-sp13_S_contig12725.2254.1 vs. uniprot
Match: D8LK96_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK96_ECTSI)

HSP 1 Score: 268 bits (684), Expect = 2.990e-86
Identity = 143/152 (94.08%), Postives = 145/152 (95.39%), Query Frame = 0
Query:    3 QALRRQQVGRGRGLPPALADLVYGAMAAFTATLVTYPLDIARTALAFQGVPKRYNSMSEFLRRTTRESGVRGLFRGATPTLAMITPQMGVSFAVWEALKGGAPP-AFSGSGSGASPAATLSWQLGAGMVAGMVGKLVVFPLDTVKKRVQTAV 153
            QA RRQQ GRGRGLPPALA+  YGAMAAFTAT+VTYPLDI RTALAFQGVPKRYNSMSEFLRRT RESGVRGLFRGATPTLAMITPQMGVSFAVWEALKGGAPP AFSGSGSGASPAATLSWQLGAGMVAGMVGKLVVFPLDTVKKRVQTAV
Sbjct:  169 QARRRQQDGRGRGLPPALANFAYGAMAAFTATVVTYPLDITRTALAFQGVPKRYNSMSEFLRRTARESGVRGLFRGATPTLAMITPQMGVSFAVWEALKGGAPPPAFSGSGSGASPAATLSWQLGAGMVAGMVGKLVVFPLDTVKKRVQTAV 320          
BLAST of mRNA_Ecto-sp13_S_contig12725.2254.1 vs. uniprot
Match: A0A836C9B4_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9B4_9STRA)

HSP 1 Score: 144 bits (362), Expect = 4.860e-38
Identity = 85/199 (42.71%), Postives = 114/199 (57.29%), Query Frame = 0
Query:   26 GAMAAFTATLVTYPLDIARTALAFQGVPKRYNSMSEFLRRTTRESGVRGLFRGATPTLAMITPQMGVSFAVWEALKGGAPPAFSGSGSGASPAATLSWQLGAGMVAGMVGKLVVFPLDTVKKRVQT-AVMVERNSAY--GVLPKYVGPVHALKTVLREEGA-AALFRGTVPAMWKTGVSTAVTYAVYEWVREGTAVALD 220
            GA A   AT  TYP D+ RTA A QGVP+++ ++  F+  T R  G RGL+ G TP +  + PQ+G++F  +EA++   P A       A PA    W   AG  AG+V K+ V+P+DT+KKR+Q  AV+  R  A   G      G V A    +  EGA  AL+RG VPA+WK+ VSTAVT+  YEWV+    V  D
Sbjct:  140 GAAAGCVATTATYPFDVMRTAFAGQGVPRQHETLHAFVAGTLRTKGARGLYAGLTPAIMQMAPQIGIAFVCYEAMRDNVPAALR-----ALPAVGAWWPAAAGFTAGLVSKIAVYPVDTLKKRMQAQAVLAGRGVAESGGAGGAXSGGVRAAALSVWREGARVALYRGMVPALWKSSVSTAVTFGTYEWVKRRIDVVDD 333          
BLAST of mRNA_Ecto-sp13_S_contig12725.2254.1 vs. uniprot
Match: A0A836C8L1_9STRA (Mitochondrial substrate/solute carrier n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8L1_9STRA)

HSP 1 Score: 141 bits (356), Expect = 2.090e-37
Identity = 81/189 (42.86%), Postives = 112/189 (59.26%), Query Frame = 0
Query:   26 GAMAAFTATLVTYPLDIARTALAFQGVPKRYNSMSEFLRRTTRESGVRGLFRGATPTLAMITPQMGVSFAVWEALKGGAPPAFSGSGSGASPAATLSWQLGAGMVAGMVGKLVVFPLDTVKKRVQTAVMVERNSAYGVLPKYVGPVHALKTVLREEGAA-ALFRGTVPAMWKTGVSTAVTYAVYEWVRE 213
            GA AA  AT  TYPLD+ RTA A QGVP+R+ ++  F   T   +GVRG + G +  L  + PQMG++F  +EA+K   P A +     A+P     W   AG  AG++ K VV+PLDT+KKRVQ  V++       V     G + +    + +EGAA AL+RG VPA+WK  +S AVT+  YEWV++
Sbjct:  122 GAAAACVATTCTYPLDVMRTAFAGQGVPRRHPTLRAFAANTLHVAGVRGFYAGLSAALVQVAPQMGIAFMAYEAVKDHPPQALA-----AAPGLATWWPGVAGFSAGLLSKTVVYPLDTLKKRVQARVVLSCAGDQAVAQ--AGNLRSAAATVWQEGAAVALYRGLVPALWKASLSAAVTFGTYEWVKQ 303          
BLAST of mRNA_Ecto-sp13_S_contig12725.2254.1 vs. uniprot
Match: D0NCY4_PHYIT (Mitochondrial Carrier (MC) Family n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NCY4_PHYIT)

HSP 1 Score: 138 bits (348), Expect = 5.550e-36
Identity = 84/203 (41.38%), Postives = 118/203 (58.13%), Query Frame = 0
Query:   15 GLPPALADLVYGAMAAFTATLVTYPLDIARTALAFQGVPKRYNSMSEFLRRTTRESGVRGLFRGATPTLAMITPQMGVSFAVWEALKGGAPPAFSGSGSGAS----PAATLSWQLGAGMVAGMVGKLVVFPLDTVKKRVQTAVMVERNSAYGVLPKYVGPVHALKTVLREEGAAALFRGTVPAMWKTGVSTAVTYAVYEWVRE 213
            G+P ++   + GA A  TAT+VTYPLD+ RTA A QG+PKR+ +M   +  T    GVRG + G   T+  I P MG+SF+++ AL   A    +    G +    P  T+    G+G VAG+V KL V+PLDTVKKR+Q    V R + YGV+P Y         VL+ EG   L++GTVP++ K+ V+ + T+A YE   E
Sbjct:  112 GIPASVVAALNGATAGATATIVTYPLDLFRTAFASQGMPKRFPTMRSLVVHTWTTQGVRGFYSGLGATVFQIVPYMGLSFSIYAALSEIAKKHRNKQEEGRTGAWMPLTTVLSYAGSGAVAGLVSKLAVYPLDTVKKRMQMR-HVPRCTTYGVIPMYSSSWSCFVDVLQREGIRGLYKGTVPSLLKSVVAASTTFATYELTLE 313          
BLAST of mRNA_Ecto-sp13_S_contig12725.2254.1 vs. uniprot
Match: M4B5N0_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B5N0_HYAAE)

HSP 1 Score: 137 bits (346), Expect = 1.170e-35
Identity = 84/211 (39.81%), Postives = 116/211 (54.98%), Query Frame = 0
Query:    7 RQQVGRGRGLPPALADLVYGAMAAFTATLVTYPLDIARTALAFQGVPKRYNSMSEFLRRTTRESGVRGLFRGATPTLAMITPQMGVSFAVWEALKGGAPPAFSGSGSGA----SPAATLSWQLGAGMVAGMVGKLVVFPLDTVKKRVQTAVMVERNSAYGVLPKYVGPVHALKTVLREEGAAALFRGTVPAMWKTGVSTAVTYAVYEWVRE 213
            + Q G     PP     + GA+A  TA + TYPLD+ RTA A QG+PKR+ +M           GVRG + G   T   I P MG+SF+++  L   A    S   S A    +P +     +G+G VAG++ KLVV+P+DTVKKR+Q    V R+ AYGV+P Y         VL+ EG   L++GTVP++ K+ VS + T+A YE   E
Sbjct:  113 QDQDGTAAATPPFRVSALNGAVAGVTAAVATYPLDLFRTAFASQGMPKRFPTMRSLALHIWTSQGVRGFYSGLGATTFQIAPYMGLSFSIYSTLNDVASKHRSKQESSAINTWTPLSRALSYVGSGAVAGLLSKLVVYPMDTVKKRMQMR-HVPRSEAYGVIPMYSSSWRCFVDVLQREGVRGLYKGTVPSLLKSVVSASATFATYELTLE 322          
BLAST of mRNA_Ecto-sp13_S_contig12725.2254.1 vs. uniprot
Match: A0A0W8DTB4_PHYNI (Uncharacterized protein n=8 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DTB4_PHYNI)

HSP 1 Score: 137 bits (344), Expect = 2.880e-35
Identity = 82/202 (40.59%), Postives = 117/202 (57.92%), Query Frame = 0
Query:   16 LPPALADLVYGAMAAFTATLVTYPLDIARTALAFQGVPKRYNSMSEFLRRTTRESGVRGLFRGATPTLAMITPQMGVSFAVWEALKGGAPPAFSGS----GSGASPAATLSWQLGAGMVAGMVGKLVVFPLDTVKKRVQTAVMVERNSAYGVLPKYVGPVHALKTVLREEGAAALFRGTVPAMWKTGVSTAVTYAVYEWVRE 213
            +P ++   V GA A  TAT+VTYPLD+ RTA A QG+PKR+ +M   +  T    G+RG + G   T+  I P MG+SF+++ AL   +    +       +   P  T    +G+G VAG+V KL V+PLDTVKKR+Q    V R + YGV+P Y         VLR EG   L++GTVP++ K+ V+ + T+A YE+  E
Sbjct:  127 VPASVIAAVNGAAAGVTATVVTYPLDLFRTAFASQGMPKRFPTMRSLVLHTWTTQGIRGFYSGLGATVFQIAPYMGLSFSIYSALSDLSEKHRNKQEDREANAWMPVTTALSYVGSGAVAGLVSKLAVYPLDTVKKRMQMR-HVPRCATYGVIPMYSSSWSCFFDVLRREGVCGLYKGTVPSLLKSVVAASTTFATYEFTLE 327          
BLAST of mRNA_Ecto-sp13_S_contig12725.2254.1 vs. uniprot
Match: A0A1W0A5C7_9STRA (Mitochondrial Carrier (MC) Family n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A5C7_9STRA)

HSP 1 Score: 134 bits (337), Expect = 9.000e-35
Identity = 76/185 (41.08%), Postives = 107/185 (57.84%), Query Frame = 0
Query:   26 GAMAAFTATLVTYPLDIARTALAFQGVPKRYNSMSEFLRRTTRESGVRGLFRGATPTLAMITPQMGVSFAVWEALKGGAPPAFSGSGSGASPAATLSWQLGAGMVAGMVGKLVVFPLDTVKKRVQTAVMVERNSAYGV-LPKYVGPVHALKTVLREEGAAALFRGTVPAMWKTGVSTAVTYAVYE 209
            GA+A   AT+ TYPLD+ RT LA QGVPK + +M  F        G++G F+G +PT+  I P MG+SF ++  L            S  S    +   +G G VAG + KL+V+PLDTVKKR+Q    + R+ AYG  +P+Y         +LR EG A  ++GTVP++ K+GVS + T+ VYE
Sbjct:  109 GAIAGVVATMATYPLDLCRTVLASQGVPKAFPTMHAFASHIYTTQGLKGFFQGLSPTIFQIAPYMGISFGIYSTL------------SDISSKHPILQAIGNGAVAGFMSKLIVYPLDTVKKRMQMQ-GIPRHEAYGAAIPRYTSSWRCAHDILRHEGVAGFYKGTVPSLIKSGVSHSCTFTVYE 280          
BLAST of mRNA_Ecto-sp13_S_contig12725.2254.1 vs. uniprot
Match: A0A5D6Y0B7_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y0B7_9STRA)

HSP 1 Score: 134 bits (338), Expect = 1.650e-34
Identity = 81/191 (42.41%), Postives = 111/191 (58.12%), Query Frame = 0
Query:   19 ALADLVYGAMAAFTATLVTYPLDIARTALAFQGVPKRYNSMSEFLRRTTRESGVRGLFRGATPTLAMITPQMGVSFAVWEALKGGAPPAFSGSGSGASPAATLSWQLGAGMVAGMVGKLVVFPLDTVKKRVQTAVMVERNSAYGVLPKYVGPVHALKTVLREEGAAALFRGTVPAMWKTGVSTAVTYAVYE 209
            A    + GA+A   AT  TYPLD+ RT LA QGVPK++ +M      T    GVRG + G   TL  I P MG+SF ++ +L   A      +   AS AA     +GAG VAG++ KL V+PLDTVKKR+Q    V R + YGV+P Y   +  L+ +LR EG   L++GT P++ K+ V+ + T+A YE
Sbjct:  122 AAVSTLNGALAGVVATAATYPLDLFRTVLASQGVPKQFPTMRSLAAHTWAARGVRGFYSGLGATLFQIAPYMGLSFGLYASLNAAAAARVDLAH--ASGAALALSYVGAGAVAGLLSKLAVYPLDTVKKRMQMR-QVPRCATYGVIPHYASSLACLRGILRREGLRGLYKGTAPSLLKSVVAHSSTFATYE 309          
BLAST of mRNA_Ecto-sp13_S_contig12725.2254.1 vs. uniprot
Match: A0A329T089_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329T089_9STRA)

HSP 1 Score: 134 bits (337), Expect = 2.460e-34
Identity = 83/204 (40.69%), Postives = 116/204 (56.86%), Query Frame = 0
Query:   15 GLPPALADLVYGAMAAFTATLVTYPLDIARTALAFQGVPKRYNSMSEFLRRTTRESGVRGLFRGATPTLAMITPQMGVSFAVWEAL-----KGGAPPAFSGSGSGASPAATLSWQLGAGMVAGMVGKLVVFPLDTVKKRVQTAVMVERNSAYGVLPKYVGPVHALKTVLREEGAAALFRGTVPAMWKTGVSTAVTYAVYEWVRE 213
            G P  +     GA+A  TAT+VTYPLD+ RTA A QG+PKR+ +M   +  T    G+RG + G   T+  I P +G+SF ++  L     K  +    S +G+       LS+ +G G VAG+V KL V+PLDTVKKR+Q    V R + YGV+P Y         VLR EG   L++GTVP++ K+ V+ + T+A YE   E
Sbjct:  115 GAPAVVITAASGAVAGVTATVVTYPLDLFRTAFASQGMPKRFPTMHSLVLHTWATQGIRGFYSGLGATVFQIAPYIGLSFGIYSTLSEMSVKNRSKQEESETGAWLPLMTALSY-VGNGAVAGLVSKLAVYPLDTVKKRMQMR-HVPRCATYGVIPMYSSSWSCFLDVLRREGVRGLYKGTVPSLLKSVVAASTTFATYELTLE 316          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12725.2254.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KH83_9PHAE4.160e-13894.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LK96_ECTSI2.990e-8694.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836C9B4_9STRA4.860e-3842.71Mitochondrial carrier domain-containing protein n=... [more]
A0A836C8L1_9STRA2.090e-3742.86Mitochondrial substrate/solute carrier n=1 Tax=Tri... [more]
D0NCY4_PHYIT5.550e-3641.38Mitochondrial Carrier (MC) Family n=2 Tax=Phytopht... [more]
M4B5N0_HYAAE1.170e-3539.81Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A0W8DTB4_PHYNI2.880e-3540.59Uncharacterized protein n=8 Tax=Phytophthora TaxID... [more]
A0A1W0A5C7_9STRA9.000e-3541.08Mitochondrial Carrier (MC) Family n=1 Tax=Thrausto... [more]
A0A5D6Y0B7_9STRA1.650e-3442.41Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A329T089_9STRA2.460e-3440.69Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002067Mitochondrial carrier proteinPRINTSPR00926MITOCARRIERcoord: 76..94
score: 26.06
coord: 128..150
score: 31.08
coord: 32..50
score: 46.68
IPR023395Mitochondrial carrier domain superfamilyGENE3D1.50.40.10coord: 111..218
e-value: 3.7E-22
score: 80.4
coord: 1..110
e-value: 4.6E-20
score: 73.5
IPR023395Mitochondrial carrier domain superfamilySUPERFAMILY103506Mitochondrial carriercoord: 12..211
IPR018108Mitochondrial substrate/solute carrierPFAMPF00153Mito_carrcoord: 124..213
e-value: 4.3E-19
score: 68.2
coord: 19..101
e-value: 3.3E-18
score: 65.4
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 119..214
score: 23.307
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 17..103
score: 21.505
NoneNo IPR availablePANTHERPTHR24089:SF59MITOCHONDRIAL THIAMINE PYROPHOSPHATE CARRIERcoord: 12..211
NoneNo IPR availablePANTHERPTHR24089FAMILY NOT NAMEDcoord: 12..211
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 41..220
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..40
NoneNo IPR availableTMHMMTMhelixcoord: 74..96
NoneNo IPR availableTMHMMTMhelixcoord: 120..142

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12725contigEcto-sp13_S_contig12725:966..3012 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12725.2254.1mRNA_Ecto-sp13_S_contig12725.2254.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12725 966..3012 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12725.2254.1 ID=prot_Ecto-sp13_S_contig12725.2254.1|Name=mRNA_Ecto-sp13_S_contig12725.2254.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=221bp
QYQALRRQQVGRGRGLPPALADLVYGAMAAFTATLVTYPLDIARTALAFQ
GVPKRYNSMSEFLRRTTRESGVRGLFRGATPTLAMITPQMGVSFAVWEAL
KGGAPPAFSGSGSGASPAATLSWQLGAGMVAGMVGKLVVFPLDTVKKRVQ
TAVMVERNSAYGVLPKYVGPVHALKTVLREEGAAALFRGTVPAMWKTGVS
TAVTYAVYEWVREGTAVALD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002067Mit_carrier
IPR023395Mt_carrier_dom_sf
IPR018108Mitochondrial_sb/sol_carrier