mRNA_Ecto-sp13_S_contig12725.2254.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig12725.2254.1 vs. uniprot
Match: A0A6H5KH83_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH83_9PHAE) HSP 1 Score: 401 bits (1031), Expect = 4.160e-138 Identity = 208/220 (94.55%), Postives = 210/220 (95.45%), Query Frame = 1
Query: 1 QYQALRRQQVGRGRGLPPALADLVYGAMAAFTATLVTYPLDIARTALAFQGVPKRYNSMSEFLRRTTRESGVRGLFRGATPTLAMITPQMGVSFAVWEALKGGAPPAFSGSGSGASPAATLSWQLGAGMVAGMVGKLVVFPLDTVKKRVQTAVMVERNSAYGVLPKYVGPVHALKTVLREEGAAALFRGTVPAMWKTGVSTAVTYAVYEWVREGTAVALD 660
QYQALRRQQ GRGRGLPPALA+ VYGAMAAFTATLVTYPLDI RTALAFQGVPKRYNSMSEFLRRT RESGVRGLFRGATPTLAMITPQMGVSFAVWEAL GGAP AFSGSGSGASPAATLSWQLGAGMVAGMVGKLVVFPLDTVKKRVQTAVM+ERNS YGVLPKY GPVHA KTVLREEGAAALFRGTVPAMWKTGVSTAVTYAVYEWVR GTAVALD
Sbjct: 183 QYQALRRQQDGRGRGLPPALANFVYGAMAAFTATLVTYPLDITRTALAFQGVPKRYNSMSEFLRRTARESGVRGLFRGATPTLAMITPQMGVSFAVWEALTGGAPRAFSGSGSGASPAATLSWQLGAGMVAGMVGKLVVFPLDTVKKRVQTAVMMERNSTYGVLPKYAGPVHAFKTVLREEGAAALFRGTVPAMWKTGVSTAVTYAVYEWVRVGTAVALD 402
BLAST of mRNA_Ecto-sp13_S_contig12725.2254.1 vs. uniprot
Match: D8LK96_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK96_ECTSI) HSP 1 Score: 268 bits (684), Expect = 2.990e-86 Identity = 143/152 (94.08%), Postives = 145/152 (95.39%), Query Frame = 1
Query: 7 QALRRQQVGRGRGLPPALADLVYGAMAAFTATLVTYPLDIARTALAFQGVPKRYNSMSEFLRRTTRESGVRGLFRGATPTLAMITPQMGVSFAVWEALKGGAPP-AFSGSGSGASPAATLSWQLGAGMVAGMVGKLVVFPLDTVKKRVQTAV 459
QA RRQQ GRGRGLPPALA+ YGAMAAFTAT+VTYPLDI RTALAFQGVPKRYNSMSEFLRRT RESGVRGLFRGATPTLAMITPQMGVSFAVWEALKGGAPP AFSGSGSGASPAATLSWQLGAGMVAGMVGKLVVFPLDTVKKRVQTAV
Sbjct: 169 QARRRQQDGRGRGLPPALANFAYGAMAAFTATVVTYPLDITRTALAFQGVPKRYNSMSEFLRRTARESGVRGLFRGATPTLAMITPQMGVSFAVWEALKGGAPPPAFSGSGSGASPAATLSWQLGAGMVAGMVGKLVVFPLDTVKKRVQTAV 320
BLAST of mRNA_Ecto-sp13_S_contig12725.2254.1 vs. uniprot
Match: A0A836C9B4_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9B4_9STRA) HSP 1 Score: 144 bits (362), Expect = 4.860e-38 Identity = 85/199 (42.71%), Postives = 114/199 (57.29%), Query Frame = 1
Query: 76 GAMAAFTATLVTYPLDIARTALAFQGVPKRYNSMSEFLRRTTRESGVRGLFRGATPTLAMITPQMGVSFAVWEALKGGAPPAFSGSGSGASPAATLSWQLGAGMVAGMVGKLVVFPLDTVKKRVQT-AVMVERNSAY--GVLPKYVGPVHALKTVLREEGA-AALFRGTVPAMWKTGVSTAVTYAVYEWVREGTAVALD 660
GA A AT TYP D+ RTA A QGVP+++ ++ F+ T R G RGL+ G TP + + PQ+G++F +EA++ P A A PA W AG AG+V K+ V+P+DT+KKR+Q AV+ R A G G V A + EGA AL+RG VPA+WK+ VSTAVT+ YEWV+ V D
Sbjct: 140 GAAAGCVATTATYPFDVMRTAFAGQGVPRQHETLHAFVAGTLRTKGARGLYAGLTPAIMQMAPQIGIAFVCYEAMRDNVPAALR-----ALPAVGAWWPAAAGFTAGLVSKIAVYPVDTLKKRMQAQAVLAGRGVAESGGAGGAXSGGVRAAALSVWREGARVALYRGMVPALWKSSVSTAVTFGTYEWVKRRIDVVDD 333
BLAST of mRNA_Ecto-sp13_S_contig12725.2254.1 vs. uniprot
Match: A0A836C8L1_9STRA (Mitochondrial substrate/solute carrier n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8L1_9STRA) HSP 1 Score: 141 bits (356), Expect = 2.090e-37 Identity = 81/189 (42.86%), Postives = 112/189 (59.26%), Query Frame = 1
Query: 76 GAMAAFTATLVTYPLDIARTALAFQGVPKRYNSMSEFLRRTTRESGVRGLFRGATPTLAMITPQMGVSFAVWEALKGGAPPAFSGSGSGASPAATLSWQLGAGMVAGMVGKLVVFPLDTVKKRVQTAVMVERNSAYGVLPKYVGPVHALKTVLREEGAA-ALFRGTVPAMWKTGVSTAVTYAVYEWVRE 639
GA AA AT TYPLD+ RTA A QGVP+R+ ++ F T +GVRG + G + L + PQMG++F +EA+K P A + A+P W AG AG++ K VV+PLDT+KKRVQ V++ V G + + + +EGAA AL+RG VPA+WK +S AVT+ YEWV++
Sbjct: 122 GAAAACVATTCTYPLDVMRTAFAGQGVPRRHPTLRAFAANTLHVAGVRGFYAGLSAALVQVAPQMGIAFMAYEAVKDHPPQALA-----AAPGLATWWPGVAGFSAGLLSKTVVYPLDTLKKRVQARVVLSCAGDQAVAQ--AGNLRSAAATVWQEGAAVALYRGLVPALWKASLSAAVTFGTYEWVKQ 303
BLAST of mRNA_Ecto-sp13_S_contig12725.2254.1 vs. uniprot
Match: D0NCY4_PHYIT (Mitochondrial Carrier (MC) Family n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NCY4_PHYIT) HSP 1 Score: 138 bits (348), Expect = 5.550e-36 Identity = 84/203 (41.38%), Postives = 118/203 (58.13%), Query Frame = 1
Query: 43 GLPPALADLVYGAMAAFTATLVTYPLDIARTALAFQGVPKRYNSMSEFLRRTTRESGVRGLFRGATPTLAMITPQMGVSFAVWEALKGGAPPAFSGSGSGAS----PAATLSWQLGAGMVAGMVGKLVVFPLDTVKKRVQTAVMVERNSAYGVLPKYVGPVHALKTVLREEGAAALFRGTVPAMWKTGVSTAVTYAVYEWVRE 639
G+P ++ + GA A TAT+VTYPLD+ RTA A QG+PKR+ +M + T GVRG + G T+ I P MG+SF+++ AL A + G + P T+ G+G VAG+V KL V+PLDTVKKR+Q V R + YGV+P Y VL+ EG L++GTVP++ K+ V+ + T+A YE E
Sbjct: 112 GIPASVVAALNGATAGATATIVTYPLDLFRTAFASQGMPKRFPTMRSLVVHTWTTQGVRGFYSGLGATVFQIVPYMGLSFSIYAALSEIAKKHRNKQEEGRTGAWMPLTTVLSYAGSGAVAGLVSKLAVYPLDTVKKRMQMR-HVPRCTTYGVIPMYSSSWSCFVDVLQREGIRGLYKGTVPSLLKSVVAASTTFATYELTLE 313
BLAST of mRNA_Ecto-sp13_S_contig12725.2254.1 vs. uniprot
Match: M4B5N0_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B5N0_HYAAE) HSP 1 Score: 137 bits (346), Expect = 1.170e-35 Identity = 84/211 (39.81%), Postives = 116/211 (54.98%), Query Frame = 1
Query: 19 RQQVGRGRGLPPALADLVYGAMAAFTATLVTYPLDIARTALAFQGVPKRYNSMSEFLRRTTRESGVRGLFRGATPTLAMITPQMGVSFAVWEALKGGAPPAFSGSGSGA----SPAATLSWQLGAGMVAGMVGKLVVFPLDTVKKRVQTAVMVERNSAYGVLPKYVGPVHALKTVLREEGAAALFRGTVPAMWKTGVSTAVTYAVYEWVRE 639
+ Q G PP + GA+A TA + TYPLD+ RTA A QG+PKR+ +M GVRG + G T I P MG+SF+++ L A S S A +P + +G+G VAG++ KLVV+P+DTVKKR+Q V R+ AYGV+P Y VL+ EG L++GTVP++ K+ VS + T+A YE E
Sbjct: 113 QDQDGTAAATPPFRVSALNGAVAGVTAAVATYPLDLFRTAFASQGMPKRFPTMRSLALHIWTSQGVRGFYSGLGATTFQIAPYMGLSFSIYSTLNDVASKHRSKQESSAINTWTPLSRALSYVGSGAVAGLLSKLVVYPMDTVKKRMQMR-HVPRSEAYGVIPMYSSSWRCFVDVLQREGVRGLYKGTVPSLLKSVVSASATFATYELTLE 322
BLAST of mRNA_Ecto-sp13_S_contig12725.2254.1 vs. uniprot
Match: A0A0W8DTB4_PHYNI (Uncharacterized protein n=8 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DTB4_PHYNI) HSP 1 Score: 137 bits (344), Expect = 2.880e-35 Identity = 82/202 (40.59%), Postives = 117/202 (57.92%), Query Frame = 1
Query: 46 LPPALADLVYGAMAAFTATLVTYPLDIARTALAFQGVPKRYNSMSEFLRRTTRESGVRGLFRGATPTLAMITPQMGVSFAVWEALKGGAPPAFSGS----GSGASPAATLSWQLGAGMVAGMVGKLVVFPLDTVKKRVQTAVMVERNSAYGVLPKYVGPVHALKTVLREEGAAALFRGTVPAMWKTGVSTAVTYAVYEWVRE 639
+P ++ V GA A TAT+VTYPLD+ RTA A QG+PKR+ +M + T G+RG + G T+ I P MG+SF+++ AL + + + P T +G+G VAG+V KL V+PLDTVKKR+Q V R + YGV+P Y VLR EG L++GTVP++ K+ V+ + T+A YE+ E
Sbjct: 127 VPASVIAAVNGAAAGVTATVVTYPLDLFRTAFASQGMPKRFPTMRSLVLHTWTTQGIRGFYSGLGATVFQIAPYMGLSFSIYSALSDLSEKHRNKQEDREANAWMPVTTALSYVGSGAVAGLVSKLAVYPLDTVKKRMQMR-HVPRCATYGVIPMYSSSWSCFFDVLRREGVCGLYKGTVPSLLKSVVAASTTFATYEFTLE 327
BLAST of mRNA_Ecto-sp13_S_contig12725.2254.1 vs. uniprot
Match: A0A1W0A5C7_9STRA (Mitochondrial Carrier (MC) Family n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A5C7_9STRA) HSP 1 Score: 134 bits (337), Expect = 9.000e-35 Identity = 76/185 (41.08%), Postives = 107/185 (57.84%), Query Frame = 1
Query: 76 GAMAAFTATLVTYPLDIARTALAFQGVPKRYNSMSEFLRRTTRESGVRGLFRGATPTLAMITPQMGVSFAVWEALKGGAPPAFSGSGSGASPAATLSWQLGAGMVAGMVGKLVVFPLDTVKKRVQTAVMVERNSAYGV-LPKYVGPVHALKTVLREEGAAALFRGTVPAMWKTGVSTAVTYAVYE 627
GA+A AT+ TYPLD+ RT LA QGVPK + +M F G++G F+G +PT+ I P MG+SF ++ L S S + +G G VAG + KL+V+PLDTVKKR+Q + R+ AYG +P+Y +LR EG A ++GTVP++ K+GVS + T+ VYE
Sbjct: 109 GAIAGVVATMATYPLDLCRTVLASQGVPKAFPTMHAFASHIYTTQGLKGFFQGLSPTIFQIAPYMGISFGIYSTL------------SDISSKHPILQAIGNGAVAGFMSKLIVYPLDTVKKRMQMQ-GIPRHEAYGAAIPRYTSSWRCAHDILRHEGVAGFYKGTVPSLIKSGVSHSCTFTVYE 280
BLAST of mRNA_Ecto-sp13_S_contig12725.2254.1 vs. uniprot
Match: A0A5D6Y0B7_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y0B7_9STRA) HSP 1 Score: 134 bits (338), Expect = 1.650e-34 Identity = 81/191 (42.41%), Postives = 111/191 (58.12%), Query Frame = 1
Query: 55 ALADLVYGAMAAFTATLVTYPLDIARTALAFQGVPKRYNSMSEFLRRTTRESGVRGLFRGATPTLAMITPQMGVSFAVWEALKGGAPPAFSGSGSGASPAATLSWQLGAGMVAGMVGKLVVFPLDTVKKRVQTAVMVERNSAYGVLPKYVGPVHALKTVLREEGAAALFRGTVPAMWKTGVSTAVTYAVYE 627
A + GA+A AT TYPLD+ RT LA QGVPK++ +M T GVRG + G TL I P MG+SF ++ +L A + AS AA +GAG VAG++ KL V+PLDTVKKR+Q V R + YGV+P Y + L+ +LR EG L++GT P++ K+ V+ + T+A YE
Sbjct: 122 AAVSTLNGALAGVVATAATYPLDLFRTVLASQGVPKQFPTMRSLAAHTWAARGVRGFYSGLGATLFQIAPYMGLSFGLYASLNAAAAARVDLAH--ASGAALALSYVGAGAVAGLLSKLAVYPLDTVKKRMQMR-QVPRCATYGVIPHYASSLACLRGILRREGLRGLYKGTAPSLLKSVVAHSSTFATYE 309
BLAST of mRNA_Ecto-sp13_S_contig12725.2254.1 vs. uniprot
Match: A0A329T089_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329T089_9STRA) HSP 1 Score: 134 bits (337), Expect = 2.460e-34 Identity = 83/204 (40.69%), Postives = 116/204 (56.86%), Query Frame = 1
Query: 43 GLPPALADLVYGAMAAFTATLVTYPLDIARTALAFQGVPKRYNSMSEFLRRTTRESGVRGLFRGATPTLAMITPQMGVSFAVWEAL-----KGGAPPAFSGSGSGASPAATLSWQLGAGMVAGMVGKLVVFPLDTVKKRVQTAVMVERNSAYGVLPKYVGPVHALKTVLREEGAAALFRGTVPAMWKTGVSTAVTYAVYEWVRE 639
G P + GA+A TAT+VTYPLD+ RTA A QG+PKR+ +M + T G+RG + G T+ I P +G+SF ++ L K + S +G+ LS+ +G G VAG+V KL V+PLDTVKKR+Q V R + YGV+P Y VLR EG L++GTVP++ K+ V+ + T+A YE E
Sbjct: 115 GAPAVVITAASGAVAGVTATVVTYPLDLFRTAFASQGMPKRFPTMHSLVLHTWATQGIRGFYSGLGATVFQIAPYIGLSFGIYSTLSEMSVKNRSKQEESETGAWLPLMTALSY-VGNGAVAGLVSKLAVYPLDTVKKRMQMR-HVPRCATYGVIPMYSSSWSCFLDVLRREGVRGLYKGTVPSLLKSVVAASTTFATYELTLE 316 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12725.2254.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig12725.2254.1 >prot_Ecto-sp13_S_contig12725.2254.1 ID=prot_Ecto-sp13_S_contig12725.2254.1|Name=mRNA_Ecto-sp13_S_contig12725.2254.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=221bp QYQALRRQQVGRGRGLPPALADLVYGAMAAFTATLVTYPLDIARTALAFQback to top mRNA from alignment at Ecto-sp13_S_contig12725:966..3012+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig12725.2254.1 ID=mRNA_Ecto-sp13_S_contig12725.2254.1|Name=mRNA_Ecto-sp13_S_contig12725.2254.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2047bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12725:966..3012+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12725:966..3012+ >mRNA_Ecto-sp13_S_contig12725.2254.1 ID=mRNA_Ecto-sp13_S_contig12725.2254.1|Name=mRNA_Ecto-sp13_S_contig12725.2254.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=663bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12725:966..3012+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |