prot_Ecto-sp13_S_contig12720.2253.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12720.2253.1
Unique Nameprot_Ecto-sp13_S_contig12720.2253.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length96
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12720.2253.1 vs. uniprot
Match: A0A6H5KM83_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM83_9PHAE)

HSP 1 Score: 202 bits (513), Expect = 5.890e-65
Identity = 90/95 (94.74%), Postives = 93/95 (97.89%), Query Frame = 0 
Query:    1 MRWEFCPTLVTPGLVAKPSLAVWHETAPCFLYGVVTTVTKIAIHGRIPLEWAWPNPRAGRLPTARRPLPHLQWAIKLPGVQPVKRGIMLFNACCR 95
            MRWE CPTL+TPGLVAKPSLAVWHETAPCFL GVVTTVTKIAIHGRIPLEWAWPNPRAGRLPTARRPLPHLQWAIKLPGVQPV+RGI+LFNACCR
Sbjct:   20 MRWEICPTLITPGLVAKPSLAVWHETAPCFLDGVVTTVTKIAIHGRIPLEWAWPNPRAGRLPTARRPLPHLQWAIKLPGVQPVERGIILFNACCR 114
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BLAST of mRNA_Ecto-sp13_S_contig12720.2253.1 vs. uniprot
Match: A0A6H5JXU8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXU8_9PHAE)

HSP 1 Score: 189 bits (480), Expect = 2.300e-59
Identity = 84/95 (88.42%), Postives = 90/95 (94.74%), Query Frame = 0 
Query:    1 MRWEFCPTLVTPGLVAKPSLAVWHETAPCFLYGVVTTVTKIAIHGRIPLEWAWPNPRAGRLPTARRPLPHLQWAIKLPGVQPVKRGIMLFNACCR 95
            +RWEFCPT  TPG+V++P+LAVWHETAPCFL GV+TTVTKIAI GRIPLEWAWPNPRAGRLPTARRPLPHLQWAIKLPGVQPVKR IMLFNACCR
Sbjct:   81 LRWEFCPTQNTPGVVSEPTLAVWHETAPCFLDGVMTTVTKIAIRGRIPLEWAWPNPRAGRLPTARRPLPHLQWAIKLPGVQPVKRRIMLFNACCR 175
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BLAST of mRNA_Ecto-sp13_S_contig12720.2253.1 vs. uniprot
Match: D7G025_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G025_ECTSI)

HSP 1 Score: 177 bits (450), Expect = 2.980e-55
Identity = 81/94 (86.17%), Postives = 84/94 (89.36%), Query Frame = 0 
Query:    1 MRWEFCPTLVTPGLVAKPSLAVWHETAPCFLYGVVTTVTKIAIHGRIPLEWAWPNPRAGRLPTARRPLPHLQWAIKLPGVQPVKRGIMLFNACC 94
            MRW+FCPTL+TPGLVAKPSLAVWHETAPCFL GVVTTVTKIAIHGRIPLEWAWPNPR   LPTARRP  HLQWAIK P VQPVKR +MLFNA C
Sbjct:   80 MRWDFCPTLITPGLVAKPSLAVWHETAPCFLTGVVTTVTKIAIHGRIPLEWAWPNPRTLTLPTARRPRTHLQWAIKSPRVQPVKRRMMLFNAWC 173
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BLAST of mRNA_Ecto-sp13_S_contig12720.2253.1 vs. uniprot
Match: A0A6H5L242_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L242_9PHAE)

HSP 1 Score: 139 bits (350), Expect = 3.110e-40
Identity = 67/96 (69.79%), Postives = 75/96 (78.12%), Query Frame = 0 
Query:    1 MRWEFCPTLVTPGLVAKPSLAVWHETAPCFLYGVVTTVTKIAIHGRIPLEWAW-PNPRAGRLPTARRPLPHLQWAIKLPGVQPVKRGIMLFNACCR 95
            +RW+FCPTL+ PGLVAKPSLAVWHETAPCFL G+V+TVTKIAIHGR PL+      P  G    +    P+LQ AIKLPGVQPVKR IMLFNACCR
Sbjct:   64 LRWDFCPTLIAPGLVAKPSLAVWHETAPCFLDGIVSTVTKIAIHGRNPLDRVGLAKPSGGATTHSTTAPPNLQCAIKLPGVQPVKRRIMLFNACCR 159
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12720.2253.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KM83_9PHAE5.890e-6594.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JXU8_9PHAE2.300e-5988.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G025_ECTSI2.980e-5586.17Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5L242_9PHAE3.110e-4069.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..95
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12720contigEcto-sp13_S_contig12720:844..1131 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12720.2253.1mRNA_Ecto-sp13_S_contig12720.2253.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12720 574..1131 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12720.2253.1 ID=prot_Ecto-sp13_S_contig12720.2253.1|Name=mRNA_Ecto-sp13_S_contig12720.2253.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=96bp
MRWEFCPTLVTPGLVAKPSLAVWHETAPCFLYGVVTTVTKIAIHGRIPLE
WAWPNPRAGRLPTARRPLPHLQWAIKLPGVQPVKRGIMLFNACCR*
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