mRNA_Ecto-sp13_S_contig1272.2252.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1272.2252.1 vs. uniprot
Match: D7G7I9_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7I9_ECTSI) HSP 1 Score: 843 bits (2178), Expect = 4.410e-301 Identity = 441/485 (90.93%), Postives = 447/485 (92.16%), Query Frame = 1
Query: 28 LRQIGQKFYRRYSGNPAGYTDRIRPYARQASRNSSVVEVCQWLHRLGIVWGDVKPENFVEGQDDDLKAIDFDSACTLSGGMASLDKDVAERVQSRFGADHVLTPRYCAPERARASVSGESCLATKATDIWSVGMVLFWLLTGQDYFENGLTDEEVVMTLCSSGFTVSLAGVDPKQEQARNLLGTMLSHIAQERGSMDSVLGRAFFAGGASVTAAKMQADMAASLGGVSSRLEATIREEGGATRRVPAPTDAPVPHPVSLLDESMKRLESRVDEILSKLGRMDRMLDHVVDGNADCPRLFVLTPVEGSQEIWKPDTWFSDYNLLTFLCAHDLAPIGKGIKVPCPRSNLEKWAPAIQASAFVLKLGSKAACMTAGVSPAAVDGMSAALGINFLAGRKVSAALRSAAGKALGDVKGSKSDDAKHTGAGNQTLRTEERLGTPDEEEGRILTGEAYEALVSFLDENDPSWRATLAADMTKAIRGDGKASV 1482
L +IGQKFY +YSGN AGY DRIRPYARQ VVEVCQWLHRLGIVWGDVKPENFVEGQDDDLKAIDFDSAC+LSGGMASLDKDVAERVQ RF ADHVLTPRYCAPERARASVSGESCLATKATDIWS GMVLFWLLTGQDYFENGL DEEVVMTLCSSGFTVSLAGVDPKQEQARNLLGTMLSHI Q RGSMDSVLGRAFFAGGASVTAAKMQADMAASLGGVSSRLEATIREEGGATR SLLDESMKRLESR DEILSKLGRMDRMLDH+VDGNADCPRLFVLTPVEGSQEIWKPDTWFSDYNLLTFLCAHDLAPIGKGIKVPCPRSNLEKWAPAIQASAFVLKLGSKAACMT GVSPAAVDGMSAALGINFLAGRKVSAALRSAAGKALGDVKGS+S+DAKH AGNQTLRTEER TPDEEEGRILTGEAYEALVSFLDEN PSWRATLA DMTKAIRGDGKASV
Sbjct: 233 LEKIGQKFYHKYSGNSAGYMDRIRPYARQ------VVEVCQWLHRLGIVWGDVKPENFVEGQDDDLKAIDFDSACSLSGGMASLDKDVAERVQRRFSADHVLTPRYCAPERARASVSGESCLATKATDIWSAGMVLFWLLTGQDYFENGLADEEVVMTLCSSGFTVSLAGVDPKQEQARNLLGTMLSHIPQGRGSMDSVLGRAFFAGGASVTAAKMQADMAASLGGVSSRLEATIREEGGATR--------------SLLDESMKRLESRADEILSKLGRMDRMLDHLVDGNADCPRLFVLTPVEGSQEIWKPDTWFSDYNLLTFLCAHDLAPIGKGIKVPCPRSNLEKWAPAIQASAFVLKLGSKAACMTVGVSPAAVDGMSAALGINFLAGRKVSAALRSAAGKALGDVKGSRSEDAKHDTAGNQTLRTEERSETPDEEEGRILTGEAYEALVSFLDENVPSWRATLAVDMTKAIRGDGKASV 697
BLAST of mRNA_Ecto-sp13_S_contig1272.2252.1 vs. uniprot
Match: A0A6H5JPM7_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPM7_9PHAE) HSP 1 Score: 608 bits (1568), Expect = 3.550e-212 Identity = 343/464 (73.92%), Postives = 357/464 (76.94%), Query Frame = 1
Query: 211 QDDDLKAIDFDSACTLSGGMASLDKDVAERVQSRFGADHVLTPRYCAPERARASVSGESCLATKATDIWSVGMVLFWLLTGQDYFENGLTDEEVVMTLCSSGFTVSLAGVDPKQEQA--------------------------RNLLGTMLSHIAQERGSMDSVLGRAFFAGGASVTAAKMQADMAASLGGVSSR----------LEATIREEGGATRRVPAPTDAPVPHPVSLLDESMKRLESRVDEILSKLGRMDRMLDHVVDGNADCPRLFVLTPVEGSQEIWKPDTWFSDYNLLTFLCAHDLAPIGKGIKVPCPRSNLEKWAPAIQASAFVLK----LGSKAACMTAGVSPAAVDGMSAALGINFLAGRKVSAALRSAAGKALGDVKGSKSDDAKHTGAGNQTLRTEERLGTPDEEEGRILTGEAYEALVSFLDENDPSWRATLAADMTKAIRGDGKASV 1482
QDDDLKAIDFDSAC+LSGGMASLDKDVA RV SRFGADHVLTPRYCAPERARASVSGESCLATKATDIWSVGMVLFWLLTGQDYFENGLTD+EVVM LCSSGFTVSLAGVDPKQEQA RNLLGTMLSH+ Q RGSMDSVLGRAFFAGGASVTAAKMQ + V SR L + E AP+ P SLLDESMKRLE R DEILSKLGRMDRMLDHVVDGNADCPRLFVLTPVEGS EIWKPDTWFSDYNLLTFLCAHDLAPIGKGIKVPCPRSNLEKWAPAIQ S F L G +C+ G+ ++ M + LG KVSAALRSAAGKALGDVKGSKSDDAK+ NQTLRTE+R TPDEEEGRILTGEAYEALVSFLDENDPSWRATLAADMTKAIRGDGKASV
Sbjct: 15 QDDDLKAIDFDSACSLSGGMASLDKDVAGRVHSRFGADHVLTPRYCAPERARASVSGESCLATKATDIWSVGMVLFWLLTGQDYFENGLTDKEVVMALCSSGFTVSLAGVDPKQEQAKKGSLCNHLLSAFDRVFYCYISLLQARNLLGTMLSHLPQGRGSMDSVLGRAFFAGGASVTAAKMQDSRSHR---VRSRCLKRVRGTDVLNGVVTESAALVPNRNAPSTLPSAR--SLLDESMKRLEFRADEILSKLGRMDRMLDHVVDGNADCPRLFVLTPVEGSLEIWKPDTWFSDYNLLTFLCAHDLAPIGKGIKVPCPRSNLEKWAPAIQGSTFSLDGSCFSGFTVSCLIKGLQFRYLEEMPSHLGKT----PKVSAALRSAAGKALGDVKGSKSDDAKYDSGRNQTLRTEQRSETPDEEEGRILTGEAYEALVSFLDENDPSWRATLAADMTKAIRGDGKASV 469
BLAST of mRNA_Ecto-sp13_S_contig1272.2252.1 vs. uniprot
Match: D8LFK1_ECTSI (TTK-like n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFK1_ECTSI) HSP 1 Score: 132 bits (333), Expect = 1.320e-28 Identity = 144/496 (29.03%), Postives = 217/496 (43.75%), Query Frame = 1
Query: 154 LHRLGIVWGDVKPENFVEGQDDDLKAIDFDSACTLSGGMASLDKDVAERVQ--SRFGADHVLTPRYCAPERARASVSGESCLATKATDIWSVGMVLFWLLTG-QDYFENGLTDEEVVM---------TLCSSGFTVSLAGVDPKQEQARNLLGTMLSHIAQERGSMDSVLGRAFFAG--GASVTAAKMQADMAASLGGVSS--RLEATIREEGGATRRVPAPTDAPVPHPVSLLDESMKRLESRVDEILSKLGRMDRMLDHVVDGNADCPRLFVLTPVEGSQEIWKPDTWFSDYNLLTFLCAH--DLAPIGK---GIKVPCPRSNLEKWAPAIQASAFVLKLGSKAACMTAGVSPAAVDGMSAALGI---NFLAGRKVSAALRSAAGKALGDVKGSKSDDAKHTGAGNQTLRTEERLGTPDE-EEGRILTGEAYEALVSFLDENDPSWRATLAADMTKAIRGDGKASVSWTCHEHASAWSRSG--SVSTVAERAGS 1560
LH LG+VWGDVKP+N+V + D L A+DF S C G +A + A SR + +Y APERARA G C+A ++ D+WS+GMVL++L TG YF + + E+ + TL F V L V + R LG L I ERG+ VL AF G G T +K + G+ S R+ A I E+ R + ++ R+ ++ ++ M +L+HV P F++ P E +++ +P WF+D L F+CAH +L P GK G V P+ ++K A ++ S + S A + S A+ ++A+L + + + + L G+A+ + SD T G P E + +TG Y +++ FLD P W + M + DG + W C +H S W S S S A RA S
Sbjct: 475 LHGLGVVWGDVKPDNYVF-RGDRLVAVDFGSTCVEVGSIAQRELGAAADTSFTSRPSDQFAWSVQYGAPERARADRQGVPCVARRSQDVWSLGMVLYYLSTGGTPYFPSPVERTEISIAQFREQAQQTLIEDNFRVDLGSV--RGSAWRCSLGLALERIVDERGTAGEVL-EAFTRGIHGLVSTVSKTR--------GMESLKRMLAVISEDQQEVLRR-----------TGTISGNVGRVLQEQLDLQRRVAAMSTVLEHVAMDEMRMPHTFLVLPEE-QRKLRRPKQWFADRGRLHFVCAHGLELVPCGKDGAGFLVAQPKEWMKKHATLLRVSVMAILAAS--AVVGNSASGGAMGPIAASLMLLPFEVIDLDEAYSFLSGVGGEAMDRMLDDVSDVLDPTKG---------EAGAPTNFERVKEVTGAEYRSVLDFLDTRCPGWDRQMGG-MERTFSADGV--MGWVCPQHMSEWKASNVKSTSATARRASS 932
BLAST of mRNA_Ecto-sp13_S_contig1272.2252.1 vs. uniprot
Match: A0A6H5L6U0_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6U0_9PHAE) HSP 1 Score: 115 bits (288), Expect = 5.130e-23 Identity = 107/356 (30.06%), Postives = 162/356 (45.51%), Query Frame = 1
Query: 154 LHRLGIVWGDVKPENFVEGQDDDLKAIDFDSACTLSGGMAS--LDKDVAERVQSRFGADHVLTPRYCAPERARASVSGESCLATKATDIWSVGMVLFWLLTG-QDYFENGLTDEEVVMTLCSSGFTVSLAGVDPKQEQARNLLGTMLSHIAQERGSMDSVLGRAFFAGGASVTAAKMQADMAASLGGVSSRLEATIREEGGATRRVPAPTDAPVPHPVSLLDESMKRLESRVDEILSKLGRMDRMLDHVVDGNADCPRLFVLTPVEGSQEIWKPDTWFSDYNLLTFLCAH--DLAPIGK---GIKVPCPRSNLEKWAPAIQASAFVLKLGSKAACMTAGVSPAAVDGMSAALGINF 1197
LH LG+VWGDVKP+NFV + D L A+DF S C G A L D S + +Y APERAR G C+A ++ D+WS+GMVL++L TG YF + TL + F V L V + R LG L ERG+ VL AF G + + + SL R+ I E+ R + ++ R+ + ++ M +L+H+ P F++ P E +++ +P WF+D L F+CAH +LAP GK G V P+ +++ A +Q + V+ + + AA S A+ ++A+L + F
Sbjct: 621 LHGLGVVWGDVKPDNFVF-RGDRLVAVDFGSTCVEVGSTAQRELGADADTSFTSSPSDQFAWSVQYAAPERARNDRLGSPCVARRSQDVWSLGMVLYYLSTGGTPYFPSP--------TLTTDNFCVDLRSV--RGSAWRCSLGLALERSVDERGTASEVL-EAFTRGIQGLVSTVSKTRGMESL----ERMLVVISEDQQEVLRR-----------TGTISGNVGRVLQEQLDFRRRVATMSTVLEHLAMDEMRMPHTFLVLP-EKQRKLRRPKQWFADRGRLHFVCAHGLELAPCGKDGAGFLVSQPKEWMKRHATLLQVT--VMAILAAAAVAGTAASGGALGPIAASLALPF 946
BLAST of mRNA_Ecto-sp13_S_contig1272.2252.1 vs. uniprot
Match: A0A7S0FSJ5_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FSJ5_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 3.390e-9 Identity = 55/179 (30.73%), Postives = 79/179 (44.13%), Query Frame = 1
Query: 154 LHRLGIVWGDVKPENFVEGQDD---------DLKAIDFDSACTLSGGMASLD-------KDVAERVQSRFGADHVLTPRYCAPERARASVSGESCLATKATDIWSVGMVLFWLLTGQDYFENGLTDEEVVMTLCSSGFTVSLAGVDPKQEQARNLLGTMLSHIAQERGSMDSVLGRAFF 642
+HR+ +VW D+KPENF+ D ++K ID +SA + G +D + A DHVL Y DIWS+GM+L+ L TG+ YFE+ DE + L S F V L V + + RNL+G L ++R S+ VL +F
Sbjct: 53 MHRVDLVWTDLKPENFIVTTDSIGCDGDCPLEVKGIDLESA--IPKGETPVDYSPEASPPEFATDFHDGLALDHVLEFTY---------------------DIWSLGMLLYELSTGKSYFEHESPDE-ITQMLSSPDFKVDLRNVT--RNRLRNLIGKCLQTDPKKRPSITEVLLHPYF 205
BLAST of mRNA_Ecto-sp13_S_contig1272.2252.1 vs. uniprot
Match: A0A2G4SR46_RHIZD (Kinase-like protein n=1 Tax=Rhizopus microsporus ATCC 52813 TaxID=1340429 RepID=A0A2G4SR46_RHIZD) HSP 1 Score: 68.2 bits (165), Expect = 2.610e-8 Identity = 39/125 (31.20%), Postives = 62/125 (49.60%), Query Frame = 1
Query: 133 VVEVCQWLHRLGIVWGDVKPENFVEGQDDDLKAIDFDSACTLSGGMASLDKDVAERVQSRFGADHVLTPRYCAPERARASVSG----ESCLATKATDIWSVGMVLFWLLTGQDYFENGLTDEEVV 495
V++ W H GI + D+KP N + + K IDF+++ T+ V+TPRYCAPE A+A+ G +AT + D+WS+G +L+ L T + F N + DE ++
Sbjct: 380 VLQALAWCHSRGIAFCDLKPSNVMHRFGKEWKLIDFEASRTIGEECVG-----------------VITPRYCAPEVAKATTYGLEGASGVVATASVDLWSLGCLLYELETKRALFPNNIKDETIL 487
BLAST of mRNA_Ecto-sp13_S_contig1272.2252.1 vs. uniprot
Match: A0A7S3CM44_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidium rassoulzadegani TaxID=1082188 RepID=A0A7S3CM44_9SPIT) HSP 1 Score: 66.2 bits (160), Expect = 3.280e-8 Identity = 46/155 (29.68%), Postives = 81/155 (52.26%), Query Frame = 1
Query: 133 VVEVCQWLHRLGIVWGDVKPENFV--EGQDDDLKAIDFDSACTLSGGMASLDKDVAERVQSRFGADHVLTPRYCAPERARASVSGESCLATKATDIWSVGMVLFWLLTGQDYFENGLTDEEVVMTLCSSGFTVSLAGVDPKQEQARNLLGTMLSH 591
++ + H+ GIV D+KPEN + + +++K +DF +A L+ + + ++S +G TP Y APE S E C DIWSVG++L+ LLTG+ F NG D+E+V + F + + ++ +A++L+ +L +
Sbjct: 121 ILSAVDYFHKKGIVHRDIKPENILLDSKRSNNIKLVDFRAAVVLNQDSSQ------DMIKSIYG-----TPYYVAPE-VLFSEYDEKC------DIWSVGIILYLLLTGKPPF-NGKDDKEIVKKVRKGYFEMDIPEMEAVSPEAQDLVKLLLDN 256
BLAST of mRNA_Ecto-sp13_S_contig1272.2252.1 vs. uniprot
Match: A0A835YGD4_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGD4_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 3.610e-8 Identity = 47/147 (31.97%), Postives = 70/147 (47.62%), Query Frame = 1
Query: 154 LHRLGIVWGDVKPENFVEGQDDDLKAIDFDSACTLSGGMASLDKDVAERVQSRFGADHVLTPRYCAPERARASVSGE--SCLATKATDIWSVGMVLFWLLTGQDYFENGLTDEEVVMTLCSSGFTVSLAGVDPKQEQARNLLGTMLS 588
+H G+VW D+K ENFV + +K ID +SA + G +D TP+ PE ARA +G A + D+WS+GM+L +L G YF G+ D +++ L + F V L+ V R +LG L+
Sbjct: 235 MHAAGLVWTDLKSENFVMTRSGAVKGIDLESA--VPTGQPCVD----------------FTPKGVPPEAARAFRAGGPGGYAAHPSYDVWSLGMMLLFLYNGSSYF-GGMNDAQIMAQLTAPDFAVDLSSV--ADGSLRRVLGAFLA 360
BLAST of mRNA_Ecto-sp13_S_contig1272.2252.1 vs. uniprot
Match: A0A367IV66_RHIAZ (Serine/threonine-protein kinase dyf-5 (Fragment) n=3 Tax=Rhizopus TaxID=4842 RepID=A0A367IV66_RHIAZ) HSP 1 Score: 67.8 bits (164), Expect = 4.370e-8 Identity = 38/125 (30.40%), Postives = 62/125 (49.60%), Query Frame = 1
Query: 133 VVEVCQWLHRLGIVWGDVKPENFVEGQDDDLKAIDFDSACTLSGGMASLDKDVAERVQSRFGADHVLTPRYCAPERARASVSG----ESCLATKATDIWSVGMVLFWLLTGQDYFENGLTDEEVV 495
+++ W H GI + D+KP N + + K IDF+++ T+ V+TPRYCAPE A+A+ G +AT + D+WS+G +L+ L T + F N + DE ++
Sbjct: 623 ILQALAWCHSRGIAFCDLKPSNVMHRFGKEWKLIDFEASRTIGEECVG-----------------VITPRYCAPEVAKATTYGLEGASGVVATASVDLWSLGCLLYELETKKALFPNSIKDETIL 730
BLAST of mRNA_Ecto-sp13_S_contig1272.2252.1 vs. uniprot
Match: A0A7S4EKF2_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EKF2_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 8.130e-8 Identity = 53/179 (29.61%), Postives = 85/179 (47.49%), Query Frame = 1
Query: 130 SVVEVCQWLHRLGIVWGDVKPENFVEGQDDDLKAIDFDSACTLSGGMASLDKDVAERVQSRFGADHVLTPRYCAPERARASVSGESCLATKAT--DIWSVGMVLFWLLTGQDYFENGLTDEEVVMTLCSS---GFTVSLAGVDPKQEQARNLLGTMLSHIAQERGSMDSVLGRAFFAGG 651
S + Q LHR G+VW D+K ENFV + ++K ID +SA + + D+ +P C PE A A ++GE T D+WS+GM++ L TG+ YF+ G T ++ L T L V+ +E+ ++L+ L +Q+R + +L +F G
Sbjct: 403 SATQCVQALHRAGLVWTDMKTENFVVMPNGEVKGIDLESAMPIGD----------------YPVDY--SPEACPPEFATAFLAGEGPYFELGTSYDVWSLGMLMLELSTGRGYFD-GKTPAQITKQLRDMDEYSMTDYLDDVEC-EERLKDLIRRCLQKDSQKRPNTAQILMHPYFLAG 561 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1272.2252.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1272.2252.1 >prot_Ecto-sp13_S_contig1272.2252.1 ID=prot_Ecto-sp13_S_contig1272.2252.1|Name=mRNA_Ecto-sp13_S_contig1272.2252.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=613bp LVLGRGGRTLRQIGQKFYRRYSGNPAGYTDRIRPYARQASRNSSVVEVCQback to top mRNA from alignment at Ecto-sp13_S_contig1272:7127..18093- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1272.2252.1 ID=mRNA_Ecto-sp13_S_contig1272.2252.1|Name=mRNA_Ecto-sp13_S_contig1272.2252.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=10967bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1272:7127..18093- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1272:7127..18093- >mRNA_Ecto-sp13_S_contig1272.2252.1 ID=mRNA_Ecto-sp13_S_contig1272.2252.1|Name=mRNA_Ecto-sp13_S_contig1272.2252.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1839bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1272:7127..18093- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |