mRNA_Ecto-sp13_S_contig12709.2242.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig12709.2242.1
Unique NamemRNA_Ecto-sp13_S_contig12709.2242.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12709.2242.1 vs. uniprot
Match: D8LKG4_ECTSI (Cystathionine beta-synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKG4_ECTSI)

HSP 1 Score: 468 bits (1203), Expect = 1.980e-160
Identity = 250/302 (82.78%), Postives = 252/302 (83.44%), Query Frame = 1 
Query:    1 QILEPWVLASP-PTLFDIVVVACGACTPXXXXXXXXRPKAYERCELWGR--GEQLGSPNE-TYANISNPMAHYENTAEEILEQCDGQVDMLVVAAGTGGTLTGVGRKLKERCPDVVLVGVDPVGSILALPEHLNDEGRLSSYKVEGIGYDFIPTVLDRNLADLWFKSNDKESFMMSRRLIREEGLLCGGSSGAAVYAAVAEAKRQRLGPGKRCVVILADSVRNYMTKYLSDEWMYEQGFAATCSQGRRVAHELPWMNVRERHGRPQAKHWSERMARSWWASKRVSELELQTPLTVSPCVTIQ 894
            +ILEPWVL SP     DIVVVACGAC               E+     R  G  L  P E  YANISNPMAHYENTAEEILEQCDGQVDMLVVAAGTGGTLTGVGRKLKERCPDVVLVGVDPVGSILALPEHLNDEGRLSSYKVEGIGYDFIPTVLDRNLADLW KSNDKESFMMSRRLIREEGLLCGGSSGAAVYAAV EAKRQRLGPGKRCVVILADSVRNYMTKYLSDEWMYEQGFAATCSQGRRVAHE PWMN            WSERMARSWWASKRVSELELQTPLTVSPCVTIQ
Sbjct:  162 KILEPWVLTSPLRDRIDIVVVACGACVHVAKLWFL---SGLEQTLFSTRILGNPLPPPPEGMYANISNPMAHYENTAEEILEQCDGQVDMLVVAAGTGGTLTGVGRKLKERCPDVVLVGVDPVGSILALPEHLNDEGRLSSYKVEGIGYDFIPTVLDRNLADLWVKSNDKESFMMSRRLIREEGLLCGGSSGAAVYAAVEEAKRQRLGPGKRCVVILADSVRNYMTKYLSDEWMYEQGFAATCSQGRRVAHEPPWMN------------WSERMARSWWASKRVSELELQTPLTVSPCVTIQ 448
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BLAST of mRNA_Ecto-sp13_S_contig12709.2242.1 vs. uniprot
Match: A0A835Z791_9STRA (Cystathionine beta-synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z791_9STRA)

HSP 1 Score: 291 bits (745), Expect = 1.330e-92
Identity = 146/237 (61.60%), Postives = 180/237 (75.95%), Query Frame = 1 
Query:  175 YANISNPMAHYENTAEEILEQCDGQVDMLVVAAGTGGTLTGVGRKLKERCPDVVLVGVDPVGSILALPEHLNDEGRLSSYKVEGIGYDFIPTVLDRNLADLWFKSNDKESFMMSRRLIREEGLLCGGSSGAAVYAAVAEAKRQRLGPGKRCVVILADSVRNYMTKYLSDEWMYEQGFAATCSQGRRVAHELPWMNVRERHGRPQAKHWSERMARSWWASKRVSELELQTPLTVSPCV 885
            Y N SNP+AHY+ TAEEIL QC G+VDM+VV  GTGGTLTG+GRKL+ERCP+V+++GVDPVGSILA PE LND+GRL SYKVEGIGYDFIP VLDR+L D W K+ND++SF+MSRRLIREEGLLCGGSSG+A++AAVA A++  L  G++CVV+L DSVRNYM+K+LSD+WMYE                             ++ H    +A SWWA+K+VSEL LQTPLT++P V
Sbjct:  135 YTNPSNPLAHYDTTAEEILAQCGGKVDMVVVGVGTGGTLTGLGRKLRERCPEVIIIGVDPVGSILAEPEALNDDGRLQSYKVEGIGYDFIPRVLDRSLVDQWVKTNDRDSFIMSRRLIREEGLLCGGSSGSAMHAAVACARQ--LKKGQKCVVVLPDSVRNYMSKFLSDDWMYENAMV-------------------------ESSHIDANIAGSWWANKKVSELALQTPLTITPGV 344
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BLAST of mRNA_Ecto-sp13_S_contig12709.2242.1 vs. uniprot
Match: A0A662X2N3_9STRA (Cystathionine beta-synthase (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X2N3_9STRA)

HSP 1 Score: 273 bits (699), Expect = 8.920e-87
Identity = 136/238 (57.14%), Postives = 172/238 (72.27%), Query Frame = 1 
Query:  175 YANISNPMAHYENTAEEILEQCDGQVDMLVVAAGTGGTLTGVGRKLKERCPDVVLVGVDPVGSILALPEHLNDEGRLSSYKVEGIGYDFIPTVLDRNLADLWFKSNDKESFMMSRRLIREEGLLCGGSSGAAVYAAVAEAKRQRLGPGKRCVVILADSVRNYMTKYLSDEWMYEQGFAATCSQGRRVAHELPWMNVRERHGRPQAKHWSERMARSWWASKRVSELELQTPLTVSPCVT 888
            Y+N SNP+AHY+ TAEEILE CDG+VDM+V+ AGTGGTL+GV RK+KE+CP+ ++VG DP GSILA PEHLNDE RL  Y+VEGIGYDFIP VLDR+L D W K+ND+ESF ++RRLIREEGLLCGGS G+A+ AA+  AK   L  G+RCVV+L DS RNYM+K+LSD+WMYE G+ A  ++                            ++ +WWA K VSEL LQ P+T++P +T
Sbjct:   57 YSNPSNPLAHYDGTAEEILEACDGRVDMVVMGAGTGGTLSGVARKIKEKCPECIVVGADPKGSILAEPEHLNDESRLKPYQVEGIGYDFIPEVLDRSLVDRWIKTNDQESFFLARRLIREEGLLCGGSCGSALAAALQAAKT--LKRGQRCVVVLPDSTRNYMSKFLSDDWMYEHGYVADMAKSV--------------------------LSATWWAKKNVSELLLQAPVTITPDLT 266
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BLAST of mRNA_Ecto-sp13_S_contig12709.2242.1 vs. uniprot
Match: A0A3M6VE71_9STRA (Cystathionine beta-synthase n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VE71_9STRA)

HSP 1 Score: 276 bits (705), Expect = 4.640e-86
Identity = 144/247 (58.30%), Postives = 178/247 (72.06%), Query Frame = 1 
Query:  151 QLGSPN----ETYANISNPMAHYENTAEEILEQCDGQVDMLVVAAGTGGTLTGVGRKLKERCPDVVLVGVDPVGSILALPEHLNDEGRLSSYKVEGIGYDFIPTVLDRNLADLWFKSNDKESFMMSRRLIREEGLLCGGSSGAAVYAAVAEAKRQRLGPGKRCVVILADSVRNYMTKYLSDEWMYEQGFAATCSQGRRVAHELPWMNVRERHGRPQAKHWSERMARSWWASKRVSELELQTPLTVSP 879
            Q+  PN    + YAN SNP+AHYE TAEEIL+QCDG+VDM+V+  GTGGT+TG+ +KLKE+CPDV++VGVDP GSILA PE LND+ RL SYKVEGIGYDFIP VLDRNL D W K+ND+ESF+MSRRLIREEGLLCGGS G+A+ AAV  A    L  G+RCVVILADS RNYMTK+++DEWM++  F                ++ RE + + + +        +WW+ +RVS LEL  P TV P
Sbjct:  180 QVELPNAHILDQYANPSNPLAHYEGTAEEILDQCDGRVDMVVIGVGTGGTITGIAKKLKEKCPDVIVVGVDPEGSILAQPESLNDKNRLKSYKVEGIGYDFIPDVLDRNLVDKWEKTNDQESFIMSRRLIREEGLLCGGSCGSAMAAAVRAAAT--LKTGQRCVVILADSTRNYMTKFINDEWMFKNKFVENT------------VHTRENYSKYRKE------TGTWWSEQRVSVLELPHPSTVPP 406
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BLAST of mRNA_Ecto-sp13_S_contig12709.2242.1 vs. uniprot
Match: A0A0P1AH27_PLAHL (Cystathionine beta-synthase n=13 Tax=Peronosporaceae TaxID=4777 RepID=A0A0P1AH27_PLAHL)

HSP 1 Score: 274 bits (701), Expect = 8.200e-86
Identity = 138/235 (58.72%), Postives = 173/235 (73.62%), Query Frame = 1 
Query:  175 YANISNPMAHYENTAEEILEQCDGQVDMLVVAAGTGGTLTGVGRKLKERCPDVVLVGVDPVGSILALPEHLNDEGRLSSYKVEGIGYDFIPTVLDRNLADLWFKSNDKESFMMSRRLIREEGLLCGGSSGAAVYAAVAEAKRQRLGPGKRCVVILADSVRNYMTKYLSDEWMYEQGFAATCSQGRRVAHELPWMNVRERHGRPQAKHWSERMARSWWASKRVSELELQTPLTVSP 879
            Y N+SNP+AHY+ TAEEIL+QCDG+VDM+V+  GTGGT++GV +KLKE+CPDV++VGVDP GSILA P+ LND  RL  YKVEGIGYDFIP VLDR+L D W K+ND+ESF+MSRRLIREEGLLCGGSSG+A+ AAV  A    L PG+RCVVIL+DS RNYM+K+L+D WMYE  F                ++  E + + + +        +WW+ + VS L+L TPLTVSP
Sbjct:  162 YTNLSNPLAHYDGTAEEILDQCDGKVDMVVMGVGTGGTISGVAKKLKEKCPDVIIVGVDPEGSILAQPDSLNDTNRLKPYKVEGIGYDFIPDVLDRSLIDKWEKTNDQESFIMSRRLIREEGLLCGGSSGSAMAAAVRAASN--LKPGQRCVVILSDSTRNYMSKFLNDAWMYENNFVENT------------VHTHENYSKYRKE------TSTWWSEQLVSALDLPTPLTVSP 376
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BLAST of mRNA_Ecto-sp13_S_contig12709.2242.1 vs. uniprot
Match: A0A662X1W2_9STRA (Cystathionine beta-synthase n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X1W2_9STRA)

HSP 1 Score: 273 bits (699), Expect = 7.220e-85
Identity = 134/238 (56.30%), Postives = 173/238 (72.69%), Query Frame = 1 
Query:  175 YANISNPMAHYENTAEEILEQCDGQVDMLVVAAGTGGTLTGVGRKLKERCPDVVLVGVDPVGSILALPEHLNDEGRLSSYKVEGIGYDFIPTVLDRNLADLWFKSNDKESFMMSRRLIREEGLLCGGSSGAAVYAAVAEAKRQRLGPGKRCVVILADSVRNYMTKYLSDEWMYEQGFAATCSQGRRVAHELPWMNVRERHGRPQAKHWSERMARSWWASKRVSELELQTPLTVSPCVT 888
            Y+N SNP+AHY+ TAEEIL+ CDG+VDM+V+ AGTGGTL+GV RK+KE+CP+ ++VG DP+GSILA PEHLNDE RL  Y+VEGIGYDFIP VLDR+L D W K+ND+ESF ++RRLIREEGLLCGGS G+A+ AA+  AK   L  G+RCVV++ DS RNYM+K+LSD+WMYE G+ A  ++                            ++ +WWA K VSEL LQ P+T++P +T
Sbjct:  214 YSNPSNPLAHYDGTAEEILDACDGRVDMVVMGAGTGGTLSGVARKIKEKCPECIVVGADPIGSILAEPEHLNDESRLKPYQVEGIGYDFIPEVLDRSLVDRWIKTNDQESFFLARRLIREEGLLCGGSCGSALAAALQAAKT--LKRGQRCVVVMPDSTRNYMSKFLSDDWMYEHGYVADMAKSV--------------------------LSAAWWAKKNVSELLLQAPVTITPDLT 423
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BLAST of mRNA_Ecto-sp13_S_contig12709.2242.1 vs. uniprot
Match: A0A8K1C9T9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C9T9_PYTOL)

HSP 1 Score: 271 bits (694), Expect = 9.180e-85
Identity = 142/238 (59.66%), Postives = 173/238 (72.69%), Query Frame = 1 
Query:  175 YANISNPMAHYENTAEEILEQCDGQVDMLVVAAGTGGTLTGVGRKLKERCPDVVLVGVDPVGSILALPEHLNDEGRLSSYKVEGIGYDFIPTVLDRNLADLWFKSNDKESFMMSRRLIREEGLLCGGSSGAAVYAAVAEAKRQRLGPGKRCVVILADSVRNYMTKYLSDEWMYEQGFAATCSQGRRVAHELPWMNVRERHGRPQAKHWSERMARSWWASKRVSELELQTPLTVSPCVT 888
            YAN SNP+AHYE TAEEIL+QCDG+VDM+V+  GTGGT++G+ +KLKE+CP V++VGVDP GSILALP+ LND+ RL SYKVEGIGYDF+P VLDR+L D W K+ND+ESF+MSRRLIREEGLLCGGSSG+A+ AAV  A    L  G+RCVVIL DS RNYMTK+LSD WMYE  F            E P ++  + + R        +   +WWA + +S LEL TP TV   VT
Sbjct:  161 YANPSNPLAHYEGTAEEILDQCDGKVDMVVMGVGTGGTISGIAKKLKEKCPGVIVVGVDPEGSILALPDSLNDKNRLKSYKVEGIGYDFVPDVLDRSLIDRWEKTNDQESFIMSRRLIREEGLLCGGSSGSAMAAAVRAASS--LQKGQRCVVILPDSTRNYMTKFLSDNWMYENDFV-----------ETP-LHTSDNYSR------FRKDVTTWWAPESLSVLELATPSTVDLAVT 378
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BLAST of mRNA_Ecto-sp13_S_contig12709.2242.1 vs. uniprot
Match: M4BWU1_HYAAE (Cystathionine beta-synthase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BWU1_HYAAE)

HSP 1 Score: 269 bits (687), Expect = 6.820e-84
Identity = 141/235 (60.00%), Postives = 169/235 (71.91%), Query Frame = 1 
Query:  175 YANISNPMAHYENTAEEILEQCDGQVDMLVVAAGTGGTLTGVGRKLKERCPDVVLVGVDPVGSILALPEHLNDEGRLSSYKVEGIGYDFIPTVLDRNLADLWFKSNDKESFMMSRRLIREEGLLCGGSSGAAVYAAVAEAKRQRLGPGKRCVVILADSVRNYMTKYLSDEWMYEQGFAATCSQGRRVAHELPWMNVRERHGRPQAKHWSERMARSWWASKRVSELELQTPLTVSP 879
            Y N SNP+AHYE TAEEIL+QCDG++DM+VV  GTGGT++G+ RKLKE+CP+V++VGVDP GSILA PE LND+ RL  YKVEGIGYDFIP VLDR+L D W K+ND+ESF+MSRRLIREEGLLCGGSSG+A+ AAV  A +  L  G+RCVVIL+DS RNYM+K+LSD WMYE  F       R    E      R+  G             +WW+ +RVS L L  P TVSP
Sbjct:  135 YVNPSNPLAHYEGTAEEILDQCDGKLDMIVVGVGTGGTISGIARKLKEKCPEVIVVGVDPEGSILAQPELLNDKNRLMPYKVEGIGYDFIPDVLDRDLVDEWQKTNDQESFIMSRRLIREEGLLCGGSSGSAMAAAVRAASK--LKAGQRCVVILSDSTRNYMSKFLSDAWMYEHKFVENTVHTRENYSEY-----RKESG-------------TWWSEQRVSVLGLPHPSTVSP 349
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BLAST of mRNA_Ecto-sp13_S_contig12709.2242.1 vs. uniprot
Match: M4BE05_HYAAE (Cystathionine beta-synthase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BE05_HYAAE)

HSP 1 Score: 266 bits (681), Expect = 1.320e-83
Identity = 133/238 (55.88%), Postives = 167/238 (70.17%), Query Frame = 1 
Query:  175 YANISNPMAHYENTAEEILEQCDGQVDMLVVAAGTGGTLTGVGRKLKERCPDVVLVGVDPVGSILALPEHLNDEGRLSSYKVEGIGYDFIPTVLDRNLADLWFKSNDKESFMMSRRLIREEGLLCGGSSGAAVYAAVAEAKRQRLGPGKRCVVILADSVRNYMTKYLSDEWMYEQGFAATCSQGRRVAHELPWMNVRERHGRPQAKHWSERMARSWWASKRVSELELQTPLTVSPCVT 888
            Y+N SNP+AHY+ TAEEILE CDG VDM+V+  GTGGTL+G  RK+KE+CP  ++VG DP+GSILA PE LNDE RL SY+VEGIGYDFIP VLDR+L D W K+ D+ESF+M+RRLIREEGLLCGGS G+AV AA+  AK   L  G+RCVV+L DS RNYM+K+LSD+WMY+  +    S+                            ++ +WWA K VSEL LQ P+T++P +T
Sbjct:   93 YSNPSNPLAHYDGTAEEILEACDGHVDMIVMGVGTGGTLSGTARKVKEKCPSCIVVGADPLGSILAQPESLNDENRLQSYQVEGIGYDFIPQVLDRSLVDRWIKTGDQESFLMARRLIREEGLLCGGSCGSAVAAALRAAKD--LKAGERCVVVLPDSTRNYMSKFLSDDWMYKHNYVTDMSKSA--------------------------LSSTWWAKKNVSELLLQAPVTITPDLT 302
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BLAST of mRNA_Ecto-sp13_S_contig12709.2242.1 vs. uniprot
Match: A0A7S3XZL8_HETAK (Cystathionine beta-synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZL8_HETAK)

HSP 1 Score: 271 bits (692), Expect = 1.390e-83
Identity = 143/240 (59.58%), Postives = 174/240 (72.50%), Query Frame = 1 
Query:  175 YANISNPMAHYENTAEEILEQCDGQ--VDMLVVAAGTGGTLTGVGRKLKERCPDVVLVGVDPVGSILALPEHLNDEGRLSSYKVEGIGYDFIPTVLDRNLADLWFKSNDKESFMMSRRLIREEGLLCGGSSGAAVYAAVAEAKRQRLGPGKRCVVILADSVRNYMTKYLSDEWMYEQGFAATCSQGRRVAHELPWMNVRERHGRPQAKHWSERMARSWWASKRVSELELQTPLTVSPCVT 888
            YAN SNP+AHY+ TAEE+LEQ  G   +DM+V+ AGTGGTL+G+ RKLKER P+ ++VGVDPVGSILA P+ LND+ RL+ YKVEGIGYDFIPTVLDR L D W K++DKESF+M+RRLIREEGLLCGGSSG A+ AAV  A    L  G+RC VIL DSVRNYMTK+L+D+WMYE GF                  V +  GRPQ +        +WW++ R+S+L LQTPLT+ P VT
Sbjct:  221 YANPSNPLAHYDRTAEELLEQVGGPEGLDMVVIGAGTGGTLSGIARKLKERAPNCLIVGVDPVGSILAEPDTLNDQNRLAPYKVEGIGYDFIPTVLDRELVDFWVKADDKESFLMARRLIREEGLLCGGSSGTAMAAAVKAATV--LKAGQRCAVILPDSVRNYMTKFLADDWMYESGF------------------VDKLDGRPQYE--------TWWSNARISDLNLQTPLTILPSVT 432
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12709.2242.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKG4_ECTSI1.980e-16082.78Cystathionine beta-synthase n=1 Tax=Ectocarpus sil... [more]
A0A835Z791_9STRA1.330e-9261.60Cystathionine beta-synthase n=1 Tax=Tribonema minu... [more]
A0A662X2N3_9STRA8.920e-8757.14Cystathionine beta-synthase (Fragment) n=1 Tax=Not... [more]
A0A3M6VE71_9STRA4.640e-8658.30Cystathionine beta-synthase n=1 Tax=Peronospora ef... [more]
A0A0P1AH27_PLAHL8.200e-8658.72Cystathionine beta-synthase n=13 Tax=Peronosporace... [more]
A0A662X1W2_9STRA7.220e-8556.30Cystathionine beta-synthase n=1 Tax=Nothophytophth... [more]
A0A8K1C9T9_PYTOL9.180e-8559.66Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
M4BWU1_HYAAE6.820e-8460.00Cystathionine beta-synthase n=1 Tax=Hyaloperonospo... [more]
M4BE05_HYAAE1.320e-8355.88Cystathionine beta-synthase n=1 Tax=Hyaloperonospo... [more]
A0A7S3XZL8_HETAK1.390e-8359.58Cystathionine beta-synthase n=1 Tax=Heterosigma ak... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12709contigEcto-sp13_S_contig12709:285..4496 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score474.2
Seed ortholog evalue4.6e-131
Seed eggNOG ortholog2880.D8LKG4
Preferred nameCBS
Model size894
KEGG rclassRC00056,RC00069,RC00256,RC00489,RC01246
KEGG koko:K01697,ko:K20032
KEGG TC9.B.37.1,9.B.37.3
KEGG ReactionR00891,R01290,R04942
KEGG Pathwayko00260,ko00270,ko01100,ko01130,ko01230,map00260,map00270,map01100,map01130,map01230
KEGG ModuleM00035,M00338
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000096,GO:0000097,GO:0000098,GO:0001101,GO:0001501,GO:0001503,GO:0001666,GO:0001932,GO:0001958,GO:0001974,GO:0003008,GO:0003013,GO:0003018,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004122,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005829,GO:0006082,GO:0006139,GO:0006259,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006565,GO:0006725,GO:0006790,GO:0006801,GO:0006807,GO:0006950,GO:0007089,GO:0007154,GO:0007275,GO:0007346,GO:0007399,GO:0007417,GO:0007420,GO:0007565,GO:0007568,GO:0007584,GO:0008015,GO:0008144,GO:0008150,GO:0008152,GO:0008340,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009069,GO:0009070,GO:0009071,GO:0009092,GO:0009093,GO:0009403,GO:0009404,GO:0009605,GO:0009628,GO:0009653,GO:0009887,GO:0009888,GO:0009966,GO:0009987,GO:0009991,GO:0010033,GO:0010243,GO:0010259,GO:0010494,GO:0010564,GO:0010646,GO:0010941,GO:0014070,GO:0016053,GO:0016054,GO:0016491,GO:0016661,GO:0016662,GO:0016829,GO:0016835,GO:0016836,GO:0017144,GO:0019220,GO:0019222,GO:0019343,GO:0019344,GO:0019346,GO:0019448,GO:0019748,GO:0019752,GO:0019825,GO:0019842,GO:0019899,GO:0020037,GO:0021549,GO:0021575,GO:0021587,GO:0022037,GO:0022414,GO:0023051,GO:0030170,GO:0030902,GO:0031323,GO:0031399,GO:0031625,GO:0031667,GO:0031668,GO:0032268,GO:0032501,GO:0032502,GO:0032504,GO:0032872,GO:0032991,GO:0033273,GO:0033554,GO:0034641,GO:0034976,GO:0035150,GO:0035770,GO:0036075,GO:0036094,GO:0036293,GO:0036294,GO:0036464,GO:0042165,GO:0042221,GO:0042262,GO:0042325,GO:0042493,GO:0042802,GO:0042803,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043405,GO:0043408,GO:0043418,GO:0043436,GO:0043506,GO:0043549,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044272,GO:0044273,GO:0044281,GO:0044282,GO:0044283,GO:0044389,GO:0044424,GO:0044444,GO:0044464,GO:0044550,GO:0044703,GO:0044706,GO:0045787,GO:0045859,GO:0045931,GO:0046328,GO:0046394,GO:0046395,GO:0046439,GO:0046483,GO:0046906,GO:0046983,GO:0048037,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048609,GO:0048705,GO:0048731,GO:0048771,GO:0048856,GO:0050421,GO:0050662,GO:0050667,GO:0050789,GO:0050790,GO:0050794,GO:0050880,GO:0050896,GO:0051171,GO:0051174,GO:0051216,GO:0051246,GO:0051338,GO:0051593,GO:0051704,GO:0051716,GO:0051726,GO:0055114,GO:0060135,GO:0060255,GO:0060322,GO:0060348,GO:0060349,GO:0060350,GO:0060351,GO:0060548,GO:0061448,GO:0065007,GO:0065008,GO:0065009,GO:0070025,GO:0070026,GO:0070279,GO:0070302,GO:0070482,GO:0070813,GO:0070814,GO:0070887,GO:0071453,GO:0071456,GO:0071496,GO:0071704,GO:0071900,GO:0072341,GO:0072593,GO:0080090,GO:0080134,GO:0080135,GO:0090066,GO:0090068,GO:0090304,GO:0097159,GO:0098605,GO:0098809,GO:1900087,GO:1901360,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607,GO:1901681,GO:1901698,GO:1901700,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902531,GO:1902806,GO:1902808,GO:1904047,GO:1990904,GO:2000045
Exons7
EggNOG free text desc.cysteine biosynthetic process from serine
EggNOG OGsCOG0031@1,KOG1252@2759
Ec32 ortholog descriptionCystathionine beta-synthase
Ec32 orthologEc-16_002870.1
EC2.3.1.225,4.2.1.22
Cds size894
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12709.2242.1prot_Ecto-sp13_S_contig12709.2242.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig12709 285..4496 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462679.0956442-CDS-Ecto-sp13_S_contig12709:284..4571681462679.0956442-CDS-Ecto-sp13_S_contig12709:284..457Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12709 285..457 +
1681462679.1095757-CDS-Ecto-sp13_S_contig12709:681..8231681462679.1095757-CDS-Ecto-sp13_S_contig12709:681..823Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12709 682..823 +
1681462679.1196194-CDS-Ecto-sp13_S_contig12709:2266..23681681462679.1196194-CDS-Ecto-sp13_S_contig12709:2266..2368Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12709 2267..2368 +
1681462679.129286-CDS-Ecto-sp13_S_contig12709:2867..29481681462679.129286-CDS-Ecto-sp13_S_contig12709:2867..2948Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12709 2868..2948 +
1681462679.139914-CDS-Ecto-sp13_S_contig12709:3525..37501681462679.139914-CDS-Ecto-sp13_S_contig12709:3525..3750Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12709 3526..3750 +
1681462679.1494348-CDS-Ecto-sp13_S_contig12709:4122..41941681462679.1494348-CDS-Ecto-sp13_S_contig12709:4122..4194Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12709 4123..4194 +
1681462679.1590207-CDS-Ecto-sp13_S_contig12709:4397..44961681462679.1590207-CDS-Ecto-sp13_S_contig12709:4397..4496Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12709 4398..4496 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig12709.2242.1

>prot_Ecto-sp13_S_contig12709.2242.1 ID=prot_Ecto-sp13_S_contig12709.2242.1|Name=mRNA_Ecto-sp13_S_contig12709.2242.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=298bp
QILEPWVLASPPTLFDIVVVACGACTPPPPPPPPPRPKAYERCELWGRGE
QLGSPNETYANISNPMAHYENTAEEILEQCDGQVDMLVVAAGTGGTLTGV
GRKLKERCPDVVLVGVDPVGSILALPEHLNDEGRLSSYKVEGIGYDFIPT
VLDRNLADLWFKSNDKESFMMSRRLIREEGLLCGGSSGAAVYAAVAEAKR
QRLGPGKRCVVILADSVRNYMTKYLSDEWMYEQGFAATCSQGRRVAHELP
WMNVRERHGRPQAKHWSERMARSWWASKRVSELELQTPLTVSPCVTIQ
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mRNA from alignment at Ecto-sp13_S_contig12709:285..4496+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig12709.2242.1 ID=mRNA_Ecto-sp13_S_contig12709.2242.1|Name=mRNA_Ecto-sp13_S_contig12709.2242.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4212bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12709:285..4496+ (Ectocarpus species13 EcNAP12_S_4_19m)
CAGATCCTTGAGCCTTGGGTATTGGCCTCCCCTCCGACATTATTCGATAT
CGTTGTCGTCGCTTGTGGCGCATGTACTCCCCCCCCCCCCCCCCCCCCCC
CCCCCCGCCCGAAGGCATATGAGCGTTGTGAACTATGGGGCAGAGGGGAA
CAGTTGGGATCCCCGAACGAGACGTTGGTGGGGCAGCTGGCAATGACCGC
CTTACTGTAGTGGCCGCCTAAATTAGCATATACATGGAATACTTGATTAT
TCCGTCCATGCCTTCCGCCTTGTATACGGCGACCGCCTTATTCAGAGCGC
CTTCCTCGGGAACCCCCACACCGCTCTAGGCAAGCGTTATCCAGCCGTTC
CTCTCGCCCTAAACTCGACCCCTGCTCCTCCCCCGCTCTTCACAAAGGTA
CGCAAACATCTCTAACCCGATGGCCCACTACGAGAACACGGCGGAGGAGA
TTCTGGAGCAGTGCGACGGCCAGGTCGACATGCTGGTCGTCGCGGCAGGG
ACGGGGGGCACGCTGACGGGCGTGGGTCGGAAACTGAAGGTATTGTATGT
GCTACTGCTGTAGGCTGCGTAGAGGGTCCCCTGTTGGGAGTGTGGCAGGC
CAAGACGGTGATTTGGCCGACCAGGTGTGGTCAAGTCTTATCGGGGATCG
ACAGGGCGGTTAAGGTGTCTGAGCTTGCTTTGGGTGTAAGGTCGTTGGAA
GTCGGGAGTTTGACAGGGTGGCTTTGTGAGTACACGTCGGCTTGACCAGT
TTCGGAGGTGGCGTAAGGCTGGTTCATGCCGGAGCGTGCGCTTGTTCGGG
TGTACTGTTTCAGGAGTTGTTGGCACTGCGGGGGCCGGAGCGGAATGCGT
GGAAGAGGTGACGAGACGGGGCAGAAGGAAAGAGAGACAGGGGGGGGTAG
TTAGCGTTGTTGGCCGCTGACTTCTCTCGGTCTTAGATCCTATCTCTCGA
ACTTGACTGGTTTCGCCCCCAACCCGCCAACGCGGACCCTTGTTCGGGGT
TAGGATCGGCGGTGTGACAGGGGTGGGTTGTTGGTCTCGGGTATCGGTCT
CCGCAACCCGGTGCGGCTTTGTACGTATCACGTTCCAAAGGGCGACGGGA
AAGCGGTGAAGCGGAGGCGTGGAACGAACCTATACGAGCGTTGCAACAAA
GAACGCGTTTCGATCTCCCCCCCCCGTCCCCGTCCCCTCCCCTCGGTGTT
TGCCATCAGAATCGGGTTTTCGTCGCTTGGCAACGACGTTGTAAAACAAG
CCAATTCACCTCGTGAACTCGGCAACCACGTCACCTTTTTTTTTACTTCG
TTTTGTTTTTGGCGGGAACCACAGTGGTGGTCGAGTAGATCATGTTGTGC
GGGCTGGAGAACCCTCACTCCGCGCAAGAGGGATAATCGCACCACGTTGT
GTCAAAATGGCCAAGCACCCTCGAGGCAGTTACACAGTGCTTACAACTTT
CTCTGGAAGTGAAAGCACCCGAAAATAAATTAAGTCATACGCAGCTGTCA
TCCATACGCAAGGAAGTAAGCACAAGATGCCGAACACTCTTGGCAGGATG
CAGTGCACCCTTTATGCGACTCGCCGATTACCTCACGGCGCTTTGCGCTT
GGTGATGTGAGAGCCTGGTCCGATGAGAACCCGGCGTGCTCCGTCCCGAC
TTTGTAGGGATGCGAGACCAATGGTCTAACGACTACGGCATGCACGACTA
TGAGTACACCCCCCCCCGCCCCGACTGTTCGGCCTCTGCTCGACCCCATA
CTTATGTCCTTGGATGTTTTGAGCACATTACGATATCAATTTCCGTGGAG
TCATAGTGGAATGCCCCTTGAAAGTCTCCGCACATGAGAATGGCTGATAC
CTCCGTGCCCAGAGGCATGTGTGGCTGATGGTCCGGCCACGAAGGCCAGC
TATCTCTACGTTGTGTACCACCCCAACTTCTCCGTTACGCTGATTCTGAA
CCTCGTGCGCGCGGTGTCGATGTACCCGGCAGGAGAGGTGTCCTGACGTG
GTGTTGGTGGGAGTGGACCCGGTGGGGTCGATCCTAGCTCTGCCGGAGCA
CCTGAACGACGAGGGGCGATTATCTTCCTACAAGGTATGCTGGTGCGGTA
CTGCCTAGGCGATTTGTCGATGGTGTTGCATGCGTGAGTAAGTGTACCTG
CCGCTGCGAGATGTAGAGCGTCTTGATGTTGACGGTCGTTCGAGGTAAGC
GCCGTGCATGTGCGAGTGTGGCGCGGCGTAGGGGATGTCGGGCTGTACAT
AGGTCCCGTGACACGTATTTTTTTTTTTTTTTTGAGGCACCTGCATGTTT
CTTGTCACGTTGATGAGCTTCCGACGACATCGACGATGATGTACTGTGCA
CGATAAATAGCTACAGTAGTGCACAACCTTCCCTCATTTCTGTCAGTTCT
CATTGTTCGACCTCAGATGGTCTGCAGAACGCCAATTTTCCGTACTTTCT
TTTGCCGCTGTTTTTTTTTGTTGTTGACTCATTGCTGTTCCTTCGGAATG
GCCTTGTTTCTTTTTTCTTTTCTTTGGTCGGCCTCCTCTCTCCCTCTCTT
TTCCTCTCTCTCCCCACGATCAACACTAACAAGGTTGAGGGCATCGGCTA
CGATTTCATCCCGACCGTTCTGGACAGAAACCTGGCGGACCTGTGGTTCA
AGAGCAACGACAAGGTGACGTCATCATGACAACGGCTGTTGGAGCATTCT
CGAATGACGTGAACGATAACGGGTATGTCGTCGTCGAAATCACTCACGAC
AGATATTATGCGCCCAAAAAGCGGTGGCCAGGGCAGATATTTTGAGGTGC
GATGAAGAAAGACTACGTTTGCAAACATCAGAACGAATTTGCGTATTCCT
TGACACAGAGACTCGTTCGCCAGAGGAGAAAAGGGGTGTAACAAGGTCGA
TTGGTGCACGGTGCTGGTAGATCGACAGTATGAGTGACCCCTACCTCACT
CTATCGCTCTACTACGCGTGTCGTCGTATGCGTGCCATCTATGCTATCGT
TACTGTACATTCCTTCCGCAAAGAACGCCCCCCCGATAACCATAGCCTTA
AATCACCGCCAACACCTGCCCAAAGCGTATCCGTGTGAGTGAAACACAGG
CGTCGGTTATTGTCACCATAGCAACGTCTGTGTTAATAAGACACAGGAGC
CGTAAGTTTATGCCAAACCCACGGTCCGTGTGAATCACTCACGGGTCGTT
TGTATTACCAATCTAGCGTCCGTGCGAATGAATGAACACAGGAGTCGTTC
ATGATGTCGCGCCGCCTGATCCGAGAGGAGGGGCTGCTGTGCGGGGGATC
GTCGGGCGCGGCCGTCTACGCCGCGGTGGCGGAGGCGAAGCGGCAGCGGC
TTGGGCCGGGCAAGCGTTGCGTCGTCATCCTTGCGGACAGCGTCCGGAAC
TACATGACCAAGTACCTCAGTGACGAGTGGATGTACGAGCAGGGCTTCGC
GGCGACGTGCTCCCAGGTGCGGCGCGTGAACTGATTTTCTTTGTAGCCGG
TGGTGTTTTTTCGCGCTGCGTTTGGGTTTGCCTGTGTTTCGCGAGTGAGT
TGTGAGGGTCTGTGTGTTCTCTGGTTTGATGACATTCGCCGCCGTAAGTG
TGTTGCGGACTGGCCAATCAGGAGAGGCGCGGGTCTTGTGTGTATCCGGC
AAAAAAAAAAAAGTACACGAATAGGTCCTTGTACTGTATTGTGCGTGTTT
TGTGTGCATGATTCTTGAATGTTTTGTGTCTTGACTGCAATGCTAACGCA
ACCTGCCAGTCGAACATAAAGACGTCGACAAATTTTTCTGTATTTCCCCC
CGGCGGGACCACTCTATGCCATGGTTCTGTGCGCGCAGGGCAGACGCGTT
GCGCATGAGCTGCCGTGGATGAACGTGAGAGAGAGACATGGGAGACCGCA
AGCCAAGCACGCAAGTGGATGCTTGTTTTTTCTCGTGGCTGCTTGGCTTT
GGAGACCGCTTTCACGGCTTGTTCTGCAGACCGCTTCCTTGTGCGCGGCA
CGCCGCCGTGATTTTTTTTTTCACCCTACCCACCTACCCCGTTATCCGCT
TTTCGTGTGCGTCCGTCTGTTTTTCGTCCTGCGTCCTTGTCGCCTCCCGC
CGCGTGGGATCAGTGGAGCGAGCGCATGGCGAGGTCGTGGTGGGCCAGCA
AGAGGGTGTCGGAGCTGGAGCTGCAGACACCGCTGACTGTCTCGCCATGC
GTGACCATCCAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12709:285..4496+

>mRNA_Ecto-sp13_S_contig12709.2242.1 ID=mRNA_Ecto-sp13_S_contig12709.2242.1|Name=mRNA_Ecto-sp13_S_contig12709.2242.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=894bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12709:285..4496+ (Ectocarpus species13 EcNAP12_S_4_19m)
CAGATCCTTGAGCCTTGGGTATTGGCCTCCCCTCCGACATTATTCGATAT
CGTTGTCGTCGCTTGTGGCGCATGTACTCCCCCCCCCCCCCCCCCCCCCC
CCCCCCGCCCGAAGGCATATGAGCGTTGTGAACTATGGGGCAGAGGGGAA
CAGTTGGGATCCCCGAACGAGACGTACGCAAACATCTCTAACCCGATGGC
CCACTACGAGAACACGGCGGAGGAGATTCTGGAGCAGTGCGACGGCCAGG
TCGACATGCTGGTCGTCGCGGCAGGGACGGGGGGCACGCTGACGGGCGTG
GGTCGGAAACTGAAGGAGAGGTGTCCTGACGTGGTGTTGGTGGGAGTGGA
CCCGGTGGGGTCGATCCTAGCTCTGCCGGAGCACCTGAACGACGAGGGGC
GATTATCTTCCTACAAGGTTGAGGGCATCGGCTACGATTTCATCCCGACC
GTTCTGGACAGAAACCTGGCGGACCTGTGGTTCAAGAGCAACGACAAGGA
GTCGTTCATGATGTCGCGCCGCCTGATCCGAGAGGAGGGGCTGCTGTGCG
GGGGATCGTCGGGCGCGGCCGTCTACGCCGCGGTGGCGGAGGCGAAGCGG
CAGCGGCTTGGGCCGGGCAAGCGTTGCGTCGTCATCCTTGCGGACAGCGT
CCGGAACTACATGACCAAGTACCTCAGTGACGAGTGGATGTACGAGCAGG
GCTTCGCGGCGACGTGCTCCCAGGGCAGACGCGTTGCGCATGAGCTGCCG
TGGATGAACGTGAGAGAGAGACATGGGAGACCGCAAGCCAAGCACTGGAG
CGAGCGCATGGCGAGGTCGTGGTGGGCCAGCAAGAGGGTGTCGGAGCTGG
AGCTGCAGACACCGCTGACTGTCTCGCCATGCGTGACCATCCAG
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