prot_Ecto-sp13_S_contig12706.2239.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12706.2239.1
Unique Nameprot_Ecto-sp13_S_contig12706.2239.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length453
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12706.2239.1 vs. uniprot
Match: D7G3M8_ECTSI (Similar to metal response element-binding transcription factor-1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3M8_ECTSI)

HSP 1 Score: 588 bits (1515), Expect = 1.440e-205
Identity = 333/372 (89.52%), Postives = 339/372 (91.13%), Query Frame = 0 
Query:   82 EAPAVQQQRRHPERVVSRWSAGAGSSNWGGGSAAGYECLICGKSFSKACKLARHAATHTGDKPFVCSEAGXXXXXXXXXXXXXXXXXXARRKAGLSTSVGDAARREAETRQRAAAFVAEAAAAGVSLEEPGAGGTAAPRRVLPLMKTTTAPLLEASRLERDRAVNGSGSGGGWAPGWKFTCGSCGRNFLDNYHLQRHIKAIHEAPRPYTCDHPVVVPPRTAPSAASAADSAAAAVSTASPGGSRARCERQAEEVVAEARGEANEGKDVARAKGSVGGVEAEGSATERGLQQXXXXXXXXXXXXRVLGVCGASFAKKWQLREHLFAEHGQSKFNSRQHRCSHAGCGRFFDRPSKLAAHEKTHKARFVCQFDGC 453
            +APAVQQQRRH  RVVSR SAG GSS WGGGS AGYECLICGKSFSKACKLARHAATHTG+KPFVCSEAGXXXXXXXXXXXXXXXXXX RRKAGLSTSVGDAARREAETRQRAAAFVAEAAAAGVSLEEPGAGG  APRRVLPLMKTTTAPLLEASRLER+RAVNGSGSGGG A GWKFTCG+CGRNFLDNYHLQRHIKAIHEAPRPYTCDHPVVVPP TAPSAAS AD  AAA +TA PGGSRARCERQ EEVVAEARGEA EGKDV+RAKGSVGGVEAEG ATERGLQQ            RVLGVCGASFAKKWQLREHLFAEHGQSKFNSRQHRCSHAGCGR FDRPSKLAAHEKTHKARFVCQFDGC
Sbjct:   43 QAPAVQQQRRHQGRVVSRRSAGDGSS-WGGGSVAGYECLICGKSFSKACKLARHAATHTGEKPFVCSEAGXXXXXXXXXXXXXXXXXXXRRKAGLSTSVGDAARREAETRQRAAAFVAEAAAAGVSLEEPGAGGIGAPRRVLPLMKTTTAPLLEASRLERERAVNGSGSGGGGAQGWKFTCGNCGRNFLDNYHLQRHIKAIHEAPRPYTCDHPVVVPPPTAPSAASVADGTAAAFATAFPGGSRARCERQGEEVVAEARGEAKEGKDVSRAKGSVGGVEAEGGATERGLQQQPQQKQQ-----RVLGVCGASFAKKWQLREHLFAEHGQSKFNSRQHRCSHAGCGRSFDRPSKLAAHEKTHKARFVCQFDGC 408
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12706.2239.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G3M8_ECTSI1.440e-20589.52Similar to metal response element-binding transcri... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 260..283
e-value: 0.076
score: 22.1
coord: 389..408
e-value: 100.0
score: 4.4
coord: 117..139
e-value: 0.012
score: 24.8
coord: 145..169
e-value: 6.5E-4
score: 29.0
coord: 418..442
e-value: 0.012
score: 24.8
IPR013087Zinc finger C2H2-typePFAMPF00096zf-C2H2coord: 260..283
e-value: 0.0032
score: 17.8
coord: 117..139
e-value: 7.9E-4
score: 19.7
coord: 145..169
e-value: 3.5E-4
score: 20.9
coord: 418..442
e-value: 0.0066
score: 16.8
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 147..169
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 420..442
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 119..139
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 262..283
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 117..144
score: 15.521
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 145..174
score: 12.175
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 260..288
score: 13.734
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 418..442
score: 10.512
NoneNo IPR availableGENE3D3.30.160.60coord: 147..173
e-value: 1.1E-9
score: 40.0
NoneNo IPR availableGENE3D3.30.160.60coord: 258..294
e-value: 2.5E-6
score: 29.7
NoneNo IPR availableGENE3D3.30.160.60coord: 360..445
e-value: 6.7E-8
score: 34.5
NoneNo IPR availableGENE3D3.30.160.60coord: 116..146
e-value: 4.0E-11
score: 44.5
NoneNo IPR availablePANTHERPTHR24388FAMILY NOT NAMEDcoord: 114..292
coord: 116..381
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 117..169
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 407..443
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 260..292

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12706contigEcto-sp13_S_contig12706:1..2591 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12706.2239.1mRNA_Ecto-sp13_S_contig12706.2239.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12706 1..2591 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12706.2239.1 ID=prot_Ecto-sp13_S_contig12706.2239.1|Name=mRNA_Ecto-sp13_S_contig12706.2239.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=453bp
MASVGLIQRVDPPHGRSCKRRRPYQDAGAARSAPATSRQRTTVACTLQQQ
DADAEKETDEASGDSDSGSEYQEDEDDEDVDEAPAVQQQRRHPERVVSRW
SAGAGSSNWGGGSAAGYECLICGKSFSKACKLARHAATHTGDKPFVCSEA
GCGKAFATKDKLERHTLSHARRKAGLSTSVGDAARREAETRQRAAAFVAE
AAAAGVSLEEPGAGGTAAPRRVLPLMKTTTAPLLEASRLERDRAVNGSGS
GGGWAPGWKFTCGSCGRNFLDNYHLQRHIKAIHEAPRPYTCDHPVVVPPR
TAPSAASAADSAAAAVSTASPGGSRARCERQAEEVVAEARGEANEGKDVA
RAKGSVGGVEAEGSATERGLQQQQQQKQQQQQQQRVLGVCGASFAKKWQL
REHLFAEHGQSKFNSRQHRCSHAGCGRFFDRPSKLAAHEKTHKARFVCQF
DGC
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf