prot_Ecto-sp13_S_contig12701.2237.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12701.2237.1
Unique Nameprot_Ecto-sp13_S_contig12701.2237.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length90
Homology
BLAST of mRNA_Ecto-sp13_S_contig12701.2237.1 vs. uniprot
Match: D8LKU7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKU7_ECTSI)

HSP 1 Score: 173 bits (438), Expect = 3.440e-49
Identity = 89/129 (68.99%), Postives = 89/129 (68.99%), Query Frame = 0
Query:    1 GSFIPNTFCRPLGRSQQKMFCGRFSTSGDVLLTASQDSVINLYDSES----------------------------------------PLKTIRCLDTAWSVISTDFSPDEKWLAYSSWSPYVHLCNTRG 89
            GSFIPNTFCRPLGRSQQKMFCGRFSTSGDVLLTASQDSVINLYDSES                                        PLKTIRCLDTAWSVISTDFSPDEKWLAYSSWSPYVHLCNTRG
Sbjct:  202 GSFIPNTFCRPLGRSQQKMFCGRFSTSGDVLLTASQDSVINLYDSESVYRWSAKSADPEENYRDEFPGFTRGMFRSSRRRLWHGAPKPLKTIRCLDTAWSVISTDFSPDEKWLAYSSWSPYVHLCNTRG 330          
BLAST of mRNA_Ecto-sp13_S_contig12701.2237.1 vs. uniprot
Match: A0A6H5K2A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2A5_9PHAE)

HSP 1 Score: 173 bits (438), Expect = 4.740e-49
Identity = 89/129 (68.99%), Postives = 89/129 (68.99%), Query Frame = 0
Query:    1 GSFIPNTFCRPLGRSQQKMFCGRFSTSGDVLLTASQDSVINLYDSES----------------------------------------PLKTIRCLDTAWSVISTDFSPDEKWLAYSSWSPYVHLCNTRG 89
            GSFIPNTFCRPLGRSQQKMFCGRFSTSGDVLLTASQDSVINLYDSES                                        PLKTIRCLDTAWSVISTDFSPDEKWLAYSSWSPYVHLCNTRG
Sbjct:  266 GSFIPNTFCRPLGRSQQKMFCGRFSTSGDVLLTASQDSVINLYDSESVYRWSAKPADPEENYRDEFPDFTYHMFRSSRRRLWHGAPKPLKTIRCLDTAWSVISTDFSPDEKWLAYSSWSPYVHLCNTRG 394          
BLAST of mRNA_Ecto-sp13_S_contig12701.2237.1 vs. uniprot
Match: A0A2P6NAE7_9EUKA (WD repeat domain 23 n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NAE7_9EUKA)

HSP 1 Score: 99.0 bits (245), Expect = 2.610e-22
Identity = 46/89 (51.69%), Postives = 60/89 (67.42%), Query Frame = 0
Query:    3 FIPNTFCRPLGRSQQKMFCGRFSTSGDVLLTASQDSVINLYDSESPLKT--IRCLDTAWSVISTDFSPDEKWLAYSSWSPYVHLCNTRG 89
            +IP  F R   R + ++FCGRFS SG V ++A QD VI +YD  S  KT  I+  +  WS+I TD+SPD++WL YSSWS Y+HLCN  G
Sbjct:  146 YIPQ-FSRNWDRYRNQIFCGRFSRSGQVFMSACQDRVIRIYDYHSGKKTKEIQARNIGWSIIDTDYSPDQRWLIYSSWSEYIHLCNITG 233          
BLAST of mRNA_Ecto-sp13_S_contig12701.2237.1 vs. uniprot
Match: UPI00077A1D94 (DDB1- and CUL4-associated factor 11-like n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A1D94)

HSP 1 Score: 97.4 bits (241), Expect = 1.030e-21
Identity = 45/91 (49.45%), Postives = 60/91 (65.93%), Query Frame = 0
Query:    3 FIPNTFCRPLGRSQQKMFCGRFSTSGDVLLTASQDSVINLYDSESP----LKTIRCLDTAWSVISTDFSPDEKWLAYSSWSPYVHLCNTRG 89
            F+PN       R  QK+FCGR+ST+GD+ L+A QD  I L+D+ +      + IR  D  WS+I TD+SPD+++L YSSWS YVHLCN  G
Sbjct:  152 FLPNMM-ETKARYHQKLFCGRYSTNGDIFLSACQDEHIRLFDTSNGQFKLFRDIRARDVGWSIIDTDYSPDQQYLIYSSWSNYVHLCNIYG 241          
BLAST of mRNA_Ecto-sp13_S_contig12701.2237.1 vs. uniprot
Match: A0A2P6NFA9_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NFA9_9EUKA)

HSP 1 Score: 95.9 bits (237), Expect = 2.140e-21
Identity = 37/76 (48.68%), Postives = 57/76 (75.00%), Query Frame = 0
Query:   16 QQKMFCGRFSTSGDVLLTASQDSVINLYDS--ESPLKTIRCLDTAWSVISTDFSPDEKWLAYSSWSPYVHLCNTRG 89
            + ++FCG++S  GD+ ++ASQD +I +YD+     +K I+  +  WS+I TD+SPD++WL YSSWSPY+HLCN +G
Sbjct:  101 RNRIFCGKYSKQGDMFMSASQDRMIRIYDTVTSEKVKVIQARNIGWSIIDTDYSPDKRWLIYSSWSPYIHLCNIQG 176          
BLAST of mRNA_Ecto-sp13_S_contig12701.2237.1 vs. uniprot
Match: A0A1X7VXM2_AMPQE (Uncharacterized protein n=2 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7VXM2_AMPQE)

HSP 1 Score: 92.4 bits (228), Expect = 6.390e-20
Identity = 41/91 (45.05%), Postives = 57/91 (62.64%), Query Frame = 0
Query:    3 FIPNTFCRPLGRSQQKMFCGRFSTSGDVLLTASQDSVINLYDSESP----LKTIRCLDTAWSVISTDFSPDEKWLAYSSWSPYVHLCNTRG 89
            F+P   C  +G  + ++FCG +S SGDV ++A Q   I+LYD+        K++   D  WSV+STDFSPD+ W  YS+WSP +HLCN  G
Sbjct:  203 FLPRHCCL-VGSYEARVFCGNYSKSGDVFISAGQSDKIDLYDTAGNKFKCYKSVGARDVGWSVLSTDFSPDQNWFIYSTWSPSIHLCNVYG 292          
BLAST of mRNA_Ecto-sp13_S_contig12701.2237.1 vs. uniprot
Match: K1QJD4_CRAGI (WD repeat-containing protein 23 n=2 Tax=Crassostrea gigas TaxID=29159 RepID=K1QJD4_CRAGI)

HSP 1 Score: 84.7 bits (208), Expect = 3.060e-17
Identity = 40/91 (43.96%), Postives = 55/91 (60.44%), Query Frame = 0
Query:    3 FIPNTFCRPLGRSQQKMFCGRFSTSGDVLLTASQDSVINLYDSESP----LKTIRCLDTAWSVISTDFSPDEKWLAYSSWSPYVHLCNTRG 89
            ++PN     +   + K FCG +S SG++ L+ASQD  I +Y++E      +K IR  D  WSV+ T FSPD  +L YSSWS  +HLCN  G
Sbjct:   85 YLPNQMS-VMANYRHKTFCGTYSKSGNIFLSASQDQNIRIYNTEDDNFDLIKRIRARDVGWSVLDTAFSPDGNYLIYSSWSDAIHLCNIHG 174          
BLAST of mRNA_Ecto-sp13_S_contig12701.2237.1 vs. uniprot
Match: UPI0009E59638 (DDB1- and CUL4-associated factor 11-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E59638)

HSP 1 Score: 84.0 bits (206), Expect = 6.040e-17
Identity = 40/92 (43.48%), Postives = 54/92 (58.70%), Query Frame = 0
Query:    2 SFIPNTFCRPLGRSQQKMFCGRFSTSGDVLLTASQDSVINLYDSE----SPLKTIRCLDTAWSVISTDFSPDEKWLAYSSWSPYVHLCNTRG 89
            ++IPN       +   K+FCG +S  G V L+A QD  + LYD+        + I   D  WS+I TD+SPD+++L YSSWS YVHLCN  G
Sbjct:  161 NYIPNKM-ETKAQYHNKLFCGSYSRDGTVFLSACQDQRLRLYDTTLGQFKVFRNIVARDVEWSIIDTDYSPDQQYLIYSSWSDYVHLCNIYG 251          
BLAST of mRNA_Ecto-sp13_S_contig12701.2237.1 vs. uniprot
Match: A0A8J4V637_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4V637_9MYCE)

HSP 1 Score: 84.0 bits (206), Expect = 6.170e-17
Identity = 39/90 (43.33%), Postives = 55/90 (61.11%), Query Frame = 0
Query:    3 FIPNTFCRPLG--RSQQKMFCGRFSTSGDVLLTASQDSVINLY--DSESPLKTIRCLDTAWSVISTDFSPDEKWLAYSSWSPYVHLCNTR 88
            F+P+   RPL       K+FC + S+ G + ++ASQD +I  +  DS    K+I   D  WS+I TD+SPD+ WL YSSWSPY+ LC  +
Sbjct:  251 FLPS---RPLNIINVHHKIFCCKMSSDGKIFMSASQDKMIRFFHTDSWQEFKSIEARDINWSIIDTDYSPDQNWLVYSSWSPYIQLCKIK 337          
BLAST of mRNA_Ecto-sp13_S_contig12701.2237.1 vs. uniprot
Match: UPI000719CD5B (DDB1- and CUL4-associated factor 11-like isoform X5 n=2 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719CD5B)

HSP 1 Score: 83.6 bits (205), Expect = 7.880e-17
Identity = 42/91 (46.15%), Postives = 53/91 (58.24%), Query Frame = 0
Query:    3 FIPNTFCRPLGRSQQKMFCGRFSTSGDVLLTASQDSVINLYDSES----PLKTIRCLDTAWSVISTDFSPDEKWLAYSSWSPYVHLCNTRG 89
            FIPN   R +     K FCG+FS SGDV +TA QD  I +YD+       LK +   D  WSV+ T FSPD  ++ YSSWS +VH+ N  G
Sbjct:   88 FIPNCMER-VASYHHKAFCGQFSQSGDVFITACQDQNIRIYDTTGNRFRQLKGVAARDVGWSVVDTAFSPDGNFVIYSSWSEFVHMVNVYG 177          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12701.2237.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKU7_ECTSI3.440e-4968.99Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K2A5_9PHAE4.740e-4968.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2P6NAE7_9EUKA2.610e-2251.69WD repeat domain 23 n=1 Tax=Planoprotostelium fung... [more]
UPI00077A1D941.030e-2149.45DDB1- and CUL4-associated factor 11-like n=1 Tax=A... [more]
A0A2P6NFA9_9EUKA2.140e-2148.68Uncharacterized protein n=1 Tax=Planoprotostelium ... [more]
A0A1X7VXM2_AMPQE6.390e-2045.05Uncharacterized protein n=2 Tax=Amphimedon queensl... [more]
K1QJD4_CRAGI3.060e-1743.96WD repeat-containing protein 23 n=2 Tax=Crassostre... [more]
UPI0009E596386.040e-1743.48DDB1- and CUL4-associated factor 11-like n=1 Tax=O... [more]
A0A8J4V637_9MYCE6.170e-1743.33Uncharacterized protein n=1 Tax=Polysphondylium vi... [more]
UPI000719CD5B7.880e-1746.15DDB1- and CUL4-associated factor 11-like isoform X... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 6..89
e-value: 3.7E-9
score: 37.8
NoneNo IPR availablePANTHERPTHR19847WD40 REPEAT PROTEINcoord: 2..87
NoneNo IPR availablePANTHERPTHR19847:SF7DDB1- AND CUL4-ASSOCIATED FACTOR 11coord: 2..87
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 20..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12701contigEcto-sp13_S_contig12701:3947..4761 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12701.2237.1mRNA_Ecto-sp13_S_contig12701.2237.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12701 3947..4761 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12701.2237.1 ID=prot_Ecto-sp13_S_contig12701.2237.1|Name=mRNA_Ecto-sp13_S_contig12701.2237.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=90bp
GSFIPNTFCRPLGRSQQKMFCGRFSTSGDVLLTASQDSVINLYDSESPLK
TIRCLDTAWSVISTDFSPDEKWLAYSSWSPYVHLCNTRG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf