prot_Ecto-sp13_S_contig12701.2236.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12701.2236.1
Unique Nameprot_Ecto-sp13_S_contig12701.2236.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length154
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12701.2236.1 vs. uniprot
Match: A0A6H5K2A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2A5_9PHAE)

HSP 1 Score: 116 bits (291), Expect = 2.070e-27
Identity = 99/118 (83.90%), Postives = 103/118 (87.29%), Query Frame = 0 
Query:   37 MDMALMDQLIREHTYGGLFFSGADERESDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPSSEPSSPVGHDAKRSSGGVGRDSEGEEEEKGGSAAGERGDGSXRRLNGKGKKRGEG 154
            MD+AL+DQLIREHTYGGLFFSGAD+RESD      XXXXXXXXXXXXXXXXXXXXXXX    SSEPS PVG DAKRSSGGVGR +EGEEEEKGGSAAG RGDGS RRLNGKGKKRGEG
Sbjct:    1 MDVALIDQLIREHTYGGLFFSGADKRESDSESEREXXXXXXXXXXXXXXXXXXXXXXXETL-SSEPSPPVGRDAKRSSGGVGRGNEGEEEEKGGSAAG-RGDGSGRRLNGKGKKRGEG 116
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BLAST of mRNA_Ecto-sp13_S_contig12701.2236.1 vs. uniprot
Match: D8LKU7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKU7_ECTSI)

HSP 1 Score: 60.1 bits (144), Expect = 1.220e-7
Identity = 27/29 (93.10%), Postives = 29/29 (100.00%), Query Frame = 0 
Query:   37 MDMALMDQLIREHTYGGLFFSGADERESD 65
            MD+ALMDQLIREHTYGGLFF+GADERESD
Sbjct:    1 MDVALMDQLIREHTYGGLFFAGADERESD 29
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12701.2236.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K2A5_9PHAE2.070e-2783.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LKU7_ECTSI1.220e-793.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12701contigEcto-sp13_S_contig12701:341..2199 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12701.2236.1mRNA_Ecto-sp13_S_contig12701.2236.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12701 341..2201 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12701.2236.1 ID=prot_Ecto-sp13_S_contig12701.2236.1|Name=mRNA_Ecto-sp13_S_contig12701.2236.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=154bp
FSSLPTPSLESTLVYRTAEAKSWFPGSSHVSTVLETMDMALMDQLIREHT
YGGLFFSGADERESDSESEREEEEEDSNDDDDASGSEVEEEEEEEEAPSS
EPSSPVGHDAKRSSGGVGRDSEGEEEEKGGSAAGERGDGSGRRLNGKGKK
RGEG
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