prot_Ecto-sp13_S_contig102.223.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig102.223.1
Unique Nameprot_Ecto-sp13_S_contig102.223.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length215
Homology
BLAST of mRNA_Ecto-sp13_S_contig102.223.1 vs. uniprot
Match: D7G0V1_ECTSI (Transcription initiation factor TFIID n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0V1_ECTSI)

HSP 1 Score: 413 bits (1062), Expect = 8.500e-146
Identity = 208/214 (97.20%), Postives = 211/214 (98.60%), Query Frame = 0
Query:    1 MEHPQGYAHAPASQPAAAGNPPHDQPQQPVVRVALQNVTATVNMRITIDPSSLANKIRHAEYNPKKLPAVVMRIREPQATGLLFSSGKVVITGATGVEAAREAAQRFVAVVEGVGLNPTTNPNQLRFAVQNMVATFEVDAPISLELMAYCQARWCMYEPELFPGLIYQTAHRGVVAHVFSSGRVVLTGGKQEDHLNEALVRLLPILNQYRQPDA 214
            MEHPQGYAHAPA+QPAAAGNPP ++PQQPVVRV LQNVTATVNMRITIDPSSLANKIRHAEYNPKKLPAVVMRIREPQATGLLFSSGKVVITGA GVEAAREAAQRFVAVVEGVGLNPTTNPNQLRFAVQNMVATFEVDAPISLELMAYCQARWCMYEPELFPGLIYQTAHRGVVAHVFSSGRVVLTGGKQEDHLNEALVRLLPILNQYRQPDA
Sbjct:    1 MEHPQGYAHAPAAQPAAAGNPPQNEPQQPVVRVVLQNVTATVNMRITIDPSSLANKIRHAEYNPKKLPAVVMRIREPQATGLLFSSGKVVITGAAGVEAAREAAQRFVAVVEGVGLNPTTNPNQLRFAVQNMVATFEVDAPISLELMAYCQARWCMYEPELFPGLIYQTAHRGVVAHVFSSGRVVLTGGKQEDHLNEALVRLLPILNQYRQPDA 214          
BLAST of mRNA_Ecto-sp13_S_contig102.223.1 vs. uniprot
Match: F0YMS8_AURAN (Uncharacterized protein GTF n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YMS8_AURAN)

HSP 1 Score: 172 bits (436), Expect = 7.330e-50
Identity = 88/179 (49.16%), Postives = 120/179 (67.04%), Query Frame = 0
Query:   33 VALQNVTATVNMRITIDPSSLANKIRHAEYNPKKLPAVVMRIREPQATGLLFSSGKVVITGATGVEAAREAAQRFVAVVEGVGLNPTTNPNQLRFAVQNMVATFEVDAPISLELMAYCQARWCMYEPELFPGLIYQTAHRGVVAHVFSSGRVVLTGGKQEDHLNEALVRLLPILNQYRQ 211
            + +QNV ATVN+RI+ID  +LA   R+AEYNPKK  AV+MR+REP+ T L+FS+GK+VITGA   +AAR  A++F A++  +G  P        F VQNMVAT +   PI LE + Y  A++  YEPELFPGLIY+      V  +F SGR+VLTGGK   HL  A  ++ P+L ++++
Sbjct:   48 IDVQNVVATVNLRISIDLRTLALNARNAEYNPKKFAAVIMRVREPRCTALVFSTGKMVITGAKSEDAARRGARKFAAIIRKIGFQPKFG----EFKVQNMVATSDAGFPIRLEALVYAHAKFSSYEPELFPGLIYRLVIPKTVLLLFVSGRMVLTGGKSLGHLRTAFEKMYPVLTEFKK 222          
BLAST of mRNA_Ecto-sp13_S_contig102.223.1 vs. uniprot
Match: A0A7S3JUH6_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JUH6_9STRA)

HSP 1 Score: 172 bits (437), Expect = 2.910e-47
Identity = 86/180 (47.78%), Postives = 120/180 (66.67%), Query Frame = 0
Query:   32 RVALQNVTATVNMRITIDPSSLANKIRHAEYNPKKLPAVVMRIREPQATGLLFSSGKVVITGATGVEAAREAAQRFVAVVEGVGLNPTTNPNQLRFAVQNMVATFEVDAPISLELMAYCQARWCMYEPELFPGLIYQTAHRGVVAHVFSSGRVVLTGGKQEDHLNEALVRLLPILNQYRQ 211
            R+ +QNV AT N+RI ID  +LA   R+AEYNPKK  AV+MR+REP+ TGL+FS+GK+V TGA     +R  A++F AV++ +G NP        F +QNMVAT +V+ PI LE + Y  +++C YEPELFPG IY+      V  +F SGR+V+TG K   HL  A  ++ P+L Q+++
Sbjct:   61 RIVIQNVVATANLRIAIDLKTLATSARNAEYNPKKFAAVIMRLREPRCTGLIFSTGKMVCTGAKSEHESRMGARKFAAVLDKIGWNPKFT----EFTIQNMVATADVNFPIRLEQLVYSHSKFCSYEPELFPGCIYRLVVPKTVILLFVSGRMVITGAKSVSHLQTAFDKIFPVLLQFKK 236          
BLAST of mRNA_Ecto-sp13_S_contig102.223.1 vs. uniprot
Match: A9CTI1_ENTBH (Transcription initiation factor TFIID n=1 Tax=Enterocytozoon bieneusi (strain H348) TaxID=481877 RepID=A9CTI1_ENTBH)

HSP 1 Score: 164 bits (414), Expect = 4.650e-47
Identity = 82/177 (46.33%), Postives = 121/177 (68.36%), Query Frame = 0
Query:   35 LQNVTATVNMRITIDPSSLANKIRHAEYNPKKLPAVVMRIREPQATGLLFSSGKVVITGATGVEAAREAAQRFVAVVEGVGLNPTTNPNQLRFAVQNMVATFEVDAPISLELMAYCQARWCMYEPELFPGLIYQTAHRGVVAHVFSSGRVVLTGGKQEDHLNEALVRLLPILNQYRQ 211
            LQNV ATVN+   +D  S+A   R+AEYNPKK  AV+MRIREP+ T L+F+SGK+V+TGA   +A+R A+QR+  +++ +G +   +     F VQN+V++ ++  PI LE +AY  + +C YEPELFPGLIY+     +V  +F SG++VLTG K+ + + EA   + P+L QYR+
Sbjct:   60 LQNVVATVNLNCKLDLKSIALHARNAEYNPKKFAAVIMRIREPKTTALIFASGKMVVTGAKSEKASRIASQRYSKIIQKLGFSVYFDS----FTVQNIVSSCDLKFPIKLEGLAYAHSNYCSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKKREDIFEAFENIYPVLTQYRK 232          
BLAST of mRNA_Ecto-sp13_S_contig102.223.1 vs. uniprot
Match: A0A1Y1S6B8_9MICR (TBP n=1 Tax=Enterospora canceri TaxID=1081671 RepID=A0A1Y1S6B8_9MICR)

HSP 1 Score: 161 bits (408), Expect = 2.140e-46
Identity = 80/184 (43.48%), Postives = 124/184 (67.39%), Query Frame = 0
Query:   28 QPVVRVALQNVTATVNMRITIDPSSLANKIRHAEYNPKKLPAVVMRIREPQATGLLFSSGKVVITGATGVEAAREAAQRFVAVVEGVGLNPTTNPNQLRFAVQNMVATFEVDAPISLELMAYCQARWCMYEPELFPGLIYQTAHRGVVAHVFSSGRVVLTGGKQEDHLNEALVRLLPILNQYRQ 211
            +P +   LQNV ATVN+   +D  S+A   R+AEYNPK+  AV+MRIREP+ T L+F+SGK+V+TGA   +A++ A+QR+  +++ +G +   +     F +QN+V++ ++   I LE +AY  + +C YEPELFPGLIY+     +V  +F SG++VLTG KQ + + EA   + P+L+QYR+
Sbjct:   34 RPEIVPVLQNVVATVNLNCKLDLKSIALHARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVVTGAKSEKASQVASQRYAKIIQKLGFSVFFDS----FKIQNIVSSCDLKFAIKLEGLAYAHSNYCSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREDIFEAFENIYPVLSQYRK 213          
BLAST of mRNA_Ecto-sp13_S_contig102.223.1 vs. uniprot
Match: Q8ST28_ENCCU (TRANSCRIPTION INITIATION FACTOR TFIID (TFIID-1) n=6 Tax=Microsporidia TaxID=6029 RepID=Q8ST28_ENCCU)

HSP 1 Score: 160 bits (406), Expect = 2.660e-46
Identity = 80/177 (45.20%), Postives = 120/177 (67.80%), Query Frame = 0
Query:   35 LQNVTATVNMRITIDPSSLANKIRHAEYNPKKLPAVVMRIREPQATGLLFSSGKVVITGATGVEAAREAAQRFVAVVEGVGLNPTTNPNQLRFAVQNMVATFEVDAPISLELMAYCQARWCMYEPELFPGLIYQTAHRGVVAHVFSSGRVVLTGGKQEDHLNEALVRLLPILNQYRQ 211
            LQNV ATVN+   +D  ++A + R+AEYNPK+  AV+MRIREP+ T L+F+SGK+VITGA   +++R AAQR+  ++  +G N T +     F +QN+V++ ++   I LE +AY  + +C YEPELFPGLIY+     +V  +F SG++VLTG K  D + +A   + P+L Q+R+
Sbjct:   25 LQNVVATVNLSCKLDLKNIALRARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVITGAKSEKSSRMAAQRYAKIIHKLGFNATFDD----FKIQNIVSSCDIKFSIRLEGLAYAHSNYCSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKVRDDIYQAFNNIYPVLIQHRK 197          
BLAST of mRNA_Ecto-sp13_S_contig102.223.1 vs. uniprot
Match: C4VBV7_NOSCE (Uncharacterized protein n=3 Tax=Nosema TaxID=27977 RepID=C4VBV7_NOSCE)

HSP 1 Score: 159 bits (403), Expect = 7.770e-46
Identity = 80/177 (45.20%), Postives = 117/177 (66.10%), Query Frame = 0
Query:   35 LQNVTATVNMRITIDPSSLANKIRHAEYNPKKLPAVVMRIREPQATGLLFSSGKVVITGATGVEAAREAAQRFVAVVEGVGLNPTTNPNQLRFAVQNMVATFEVDAPISLELMAYCQARWCMYEPELFPGLIYQTAHRGVVAHVFSSGRVVLTGGKQEDHLNEALVRLLPILNQYRQ 211
            LQNV ATVN+   +D  ++A + R+AEYNPK+  AV+MRIREP+ T L+F+SGKVVITGA   + ++ AAQR+  ++  +G N   N     F +QN+V++ +    I LE +AY  + +C YEPELFPGLIY+     +V  +F SG++VLTG K  D + +A   + P+L QY++
Sbjct:   26 LQNVVATVNLNCKLDLKNIALRARNAEYNPKRFAAVIMRIREPKTTALIFASGKVVITGAKSEKQSKLAAQRYSKIINKLGFNADFND----FKIQNIVSSCDTKFSIRLEGLAYSHSNYCSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKVRDDIYQAFENIYPVLTQYKK 198          
BLAST of mRNA_Ecto-sp13_S_contig102.223.1 vs. uniprot
Match: UPI0010FB6E15 (TATA-box-binding protein-like n=1 Tax=Nylanderia fulva TaxID=613905 RepID=UPI0010FB6E15)

HSP 1 Score: 159 bits (401), Expect = 1.700e-45
Identity = 80/187 (42.78%), Postives = 121/187 (64.71%), Query Frame = 0
Query:   25 QPQQPVVRVALQNVTATVNMRITIDPSSLANKIRHAEYNPKKLPAVVMRIREPQATGLLFSSGKVVITGATGVEAAREAAQRFVAVVEGVGLNPTTNPNQLRFAVQNMVATFEVDAPISLELMAYCQARWCMYEPELFPGLIYQTAHRGVVAHVFSSGRVVLTGGKQEDHLNEALVRLLPILNQYRQ 211
            Q Q+  +   LQNV ATVN+   +D  ++A + R+AEYNPK+  AV+MRIR+P+ T L+F+SGK+VITGA   E++R AAQ++  ++  +G N         F +QN+V++ +    I LE +A+  + +C YEPELFPGLIY+     +V  +F SG++VLTG K  D + +A   + P+L QYR+
Sbjct:   19 QQQRSGITPVLQNVVATVNLNCKLDLKAIALRARNAEYNPKRFAAVIMRIRDPKTTSLIFASGKMVITGAKSEESSRIAAQKYARIIHKLGFNTRFAD----FKIQNIVSSCDTKFSIRLEGLAFAHSNYCSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKVRDEIYQAFENIYPVLTQYRK 201          
BLAST of mRNA_Ecto-sp13_S_contig102.223.1 vs. uniprot
Match: A0A7J7ISE2_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7ISE2_9RHOD)

HSP 1 Score: 160 bits (404), Expect = 1.820e-45
Identity = 83/184 (45.11%), Postives = 120/184 (65.22%), Query Frame = 0
Query:   31 VRVALQNVTATVNMRITIDPSSLANKIRHAEYNPKKLPAVVMRIREPQATGLLFSSGKVVITGATGVEAAREAAQRFVAVVEGVGLNPTTNPNQLRFAVQNMVATFEVDAPISLELMAYCQARWCMYEPELFPGLIYQTAHRGVVAHVFSSGRVVLTGGKQEDHLNEALVRLLPILNQYRQPDA 214
            V V LQNV ATVN+   +D   +A + R+AEYNPK+  AV+MRIR+P+ T L+FS+GKVVITGA   E AR AA+++  +V  +G       +   F + N+VA+ +V  PI LE +A+  + +  YEPELFPGL+Y+     +   +F SG+VV+TG K  D LN+A  +L P+L Q+R+ D+
Sbjct:   39 VEVKLQNVVATVNLVCPLDLRHIAMRARNAEYNPKRFAAVIMRIRDPKTTALIFSTGKVVITGARSEEDARLAARKYAKIVRKLGYEDVKFAD---FGLHNLVASADVRFPIRLEALAHAHSNYAHYEPELFPGLVYRMLEPKLALLIFVSGKVVITGAKSRDDLNDAFQKLYPVLCQFRKADS 219          
BLAST of mRNA_Ecto-sp13_S_contig102.223.1 vs. uniprot
Match: A0A109FK61_9BASI (TBP-domain-containing protein n=3 Tax=Rhodotorula TaxID=5533 RepID=A0A109FK61_9BASI)

HSP 1 Score: 160 bits (405), Expect = 1.960e-45
Identity = 80/178 (44.94%), Postives = 118/178 (66.29%), Query Frame = 0
Query:   35 LQNVTATVNMRITIDPSSLANKIRHAEYNPKKLPAVVMRIREPQATGLLFSSGKVVITGATGVEAAREAAQRFVAVVEGVGLNPTTNPNQLRFAVQNMVATFEVDAPISLELMAYCQARWCMYEPELFPGLIYQTAHRGVVAHVFSSGRVVLTGGKQEDHLNEALVRLLPILNQYRQP 212
            LQN+ ATVN+   +D  ++A   R+AEYNPK+  AV+MRIREP+ T L+F+SGKVV+TGA   + +R AA+++  +++ +G           F +QN+V + +V  PI LE +AY    +  YEPELFPGLIY+     VV  +F SG++VLTG KQ D + +A  ++ P+LN+YR+P
Sbjct:   82 LQNLVATVNLECKLDLKTIALHARNAEYNPKRFAAVIMRIREPKTTALVFASGKVVVTGAKSEDDSRLAARKYARIIQKLGFETKFTD----FKIQNIVGSCDVKFPIRLEGLAYGHGHFSSYEPELFPGLIYRMVKPKVVLLIFVSGKIVLTGAKQRDEIYQAFAQIYPVLNEYRKP 255          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig102.223.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0V1_ECTSI8.500e-14697.20Transcription initiation factor TFIID n=2 Tax=Ecto... [more]
F0YMS8_AURAN7.330e-5049.16Uncharacterized protein GTF n=1 Tax=Aureococcus an... [more]
A0A7S3JUH6_9STRA2.910e-4747.78Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A9CTI1_ENTBH4.650e-4746.33Transcription initiation factor TFIID n=1 Tax=Ente... [more]
A0A1Y1S6B8_9MICR2.140e-4643.48TBP n=1 Tax=Enterospora canceri TaxID=1081671 RepI... [more]
Q8ST28_ENCCU2.660e-4645.20TRANSCRIPTION INITIATION FACTOR TFIID (TFIID-1) n=... [more]
C4VBV7_NOSCE7.770e-4645.20Uncharacterized protein n=3 Tax=Nosema TaxID=27977... [more]
UPI0010FB6E151.700e-4542.78TATA-box-binding protein-like n=1 Tax=Nylanderia f... [more]
A0A7J7ISE2_9RHOD1.820e-4545.11Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
A0A109FK61_9BASI1.960e-4544.94TBP-domain-containing protein n=3 Tax=Rhodotorula ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000814TATA-box binding proteinPRINTSPR00686TIFACTORIIDcoord: 59..78
score: 61.49
coord: 78..96
score: 53.08
coord: 153..168
score: 66.36
coord: 172..188
score: 48.56
coord: 35..50
score: 39.23
IPR000814TATA-box binding proteinPFAMPF00352TBPcoord: 34..111
e-value: 4.4E-24
score: 84.2
coord: 127..209
e-value: 5.2E-23
score: 80.8
IPR000814TATA-box binding proteinPANTHERPTHR10126TATA-BOX BINDING PROTEINcoord: 11..211
IPR012295TBP domain superfamilyGENE3D3.30.310.10coord: 40..129
e-value: 1.1E-56
score: 193.1
IPR012295TBP domain superfamilyGENE3D3.30.310.10coord: 36..209
e-value: 1.1E-56
score: 193.1
NoneNo IPR availablePANTHERPTHR10126:SF6TATA BOX-BINDING PROTEIN-LIKE PROTEIN 2-RELATEDcoord: 11..211
NoneNo IPR availableSUPERFAMILY55945TATA-box binding protein-likecoord: 29..121
NoneNo IPR availableSUPERFAMILY55945TATA-box binding protein-likecoord: 123..210

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig102contigEcto-sp13_S_contig102:29962..38368 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig102.223.1mRNA_Ecto-sp13_S_contig102.223.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig102 29324..38368 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig102.223.1 ID=prot_Ecto-sp13_S_contig102.223.1|Name=mRNA_Ecto-sp13_S_contig102.223.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=215bp
MEHPQGYAHAPASQPAAAGNPPHDQPQQPVVRVALQNVTATVNMRITIDP
SSLANKIRHAEYNPKKLPAVVMRIREPQATGLLFSSGKVVITGATGVEAA
REAAQRFVAVVEGVGLNPTTNPNQLRFAVQNMVATFEVDAPISLELMAYC
QARWCMYEPELFPGLIYQTAHRGVVAHVFSSGRVVLTGGKQEDHLNEALV
RLLPILNQYRQPDA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000814TBP
IPR012295TBP_dom_sf