|
|
Homology
BLAST of mRNA_Ecto-sp13_S_contig1270.2235.1 vs. uniprot
Match: A0A6H5LQU7_9PHAE (Methyltransf_11 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LQU7_9PHAE) HSP 1 Score: 755 bits (1950), Expect = 6.030e-269 Identity = 377/396 (95.20%), Postives = 383/396 (96.72%), Query Frame = 1
Query: 1 MKTAVPVHVLWAGFCALWPCHAFVPSSSLPSFGVHSGIDGTTASSFDRNGHGHDCGYGAAGSARGKGRRRAAPSRARAQGDVSMGLRGAAKNTWKRARGGGNGGKTRSDGELKEGIANFYDKSSGIWEEMWGEHMHHGYYVQGVKPKNMEHHRAAQRFMIGRSLEWAGVEEGGAAPKTGVDIGCGVGGSSRAISRRYGTSMTGISLSPVQVERAKTLSEAAGLGDKCKFQVADALNTPFDTDSFDLVWSMESGEHMPYKPKFVGELARICAPGGRVLVVTWCHRDLEEGETELTPKEEKLLAKINKAYYLPRWCSTADYVKYFEGEGLVDIKRADWTDNIQNFWPAVIRSSVSFQGIVGLLKSGPVTIRGAVAMLLMVRGYKRGLVKFALITGKKP 1188
MKTAVPVH LWAGFCAL PCHAFVPSSSLPSFG HS +DG TA+SFDR+GH HDC YGAAGSARGKGRRRAAPSRARAQGD SMGLR AA+NTWKRARGGG G KTRSDGELKEGIANFYDKSSGIWEEMWGEHMHHGYYVQGVKPKNMEHHRAAQRFMIGRSLEWAGVEEGGAAPKTGVDIGCGVGGSSRAISRRYGT+MTGISLSPVQVERAK LSEAAGLGDKCKFQVADALNTPFDTDSFDLVWSMESGEHMPYKPKFVGELARICAPGGRVLVVTWCHRDLEEGETELTPKEEKLLAKINKAYYLPRWCST+DYVKYFE EGLVDIKRADWTDNIQNFWPAVIRSSVSFQGIVGLLKSGPVTIRGAVAMLLMVRGYKRGLVKFALITGKKP
Sbjct: 1 MKTAVPVHALWAGFCALSPCHAFVPSSSLPSFGDHSVVDGRTAASFDRHGHVHDCAYGAAGSARGKGRRRAAPSRARAQGDASMGLRSAAENTWKRARGGGKG-KTRSDGELKEGIANFYDKSSGIWEEMWGEHMHHGYYVQGVKPKNMEHHRAAQRFMIGRSLEWAGVEEGGAAPKTGVDIGCGVGGSSRAISRRYGTNMTGISLSPVQVERAKNLSEAAGLGDKCKFQVADALNTPFDTDSFDLVWSMESGEHMPYKPKFVGELARICAPGGRVLVVTWCHRDLEEGETELTPKEEKLLAKINKAYYLPRWCSTSDYVKYFEDEGLVDIKRADWTDNIQNFWPAVIRSSVSFQGIVGLLKSGPVTIRGAVAMLLMVRGYKRGLVKFALITGKKP 395
BLAST of mRNA_Ecto-sp13_S_contig1270.2235.1 vs. uniprot
Match: A0A836C920_9STRA (Gamma-tocopherol methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C920_9STRA) HSP 1 Score: 414 bits (1065), Expect = 4.010e-136 Identity = 198/293 (67.58%), Postives = 239/293 (81.57%), Query Frame = 1
Query: 313 KTRSDGELKEGIANFYDKSSGIWEEMWGEHMHHGYYVQGVKPKNMEHHRAAQRFMIGRSLEWAGVE-EGGAAPKTGVDIGCGVGGSSRAISRRYGTSMTGISLSPVQVERAKTLSEAAGLGDKCKFQVADALNTPFDTDSFDLVWSMESGEHMPYKPKFVGELARICAPGGRVLVVTWCHRDLEEGETELTPKEEKLLAKINKAYYLPRWCSTADYVKYFEGEGLVDIKRADWTDNIQNFWPAVIRSSVSFQGIVGLLKSGPVTIRGAVAMLLMVRGYKRGLVKFALITGKKP 1188
+ RS ELK+GIANFYDKSSG+WE +WGEHMHHGYY + +P+++E H+AAQ MI +SLEWAGV + + PKTGVD+GCG+GGSSR I+R++GT M GI+LSP Q RA L+ AGL DKC FQVADAL PF+ +SFDL+WSMESGEHMP K +FVGELAR+CAPGGRVL+VTWCHRDLEEGE L PKE++LLA INKAYYLP+WCS ADYV Y + GL D++R DWTD IQ FWPAVI+SS+S +GI GL+++GP IRGA+AMLLMVRG+K LVKF LIT +KP
Sbjct: 23 RERSRAELKDGIANFYDKSSGLWESIWGEHMHHGYYEE--QPQSLEEHKAAQVAMIDKSLEWAGVGVDAASTPKTGVDVGCGIGGSSRHIARKWGTKMQGITLSPKQCARANELAAEAGLADKCSFQVADALEQPFEDNSFDLIWSMESGEHMPLKQQFVGELARVCAPGGRVLIVTWCHRDLEEGEESLKPKEQRLLAAINKAYYLPKWCSVADYVTYCQEAGLTDVRRDDWTDKIQYFWPAVIKSSLSGRGIRGLVRAGPGIIRGALAMLLMVRGFKLNLVKFGLITARKP 313
BLAST of mRNA_Ecto-sp13_S_contig1270.2235.1 vs. uniprot
Match: A0A6S9IJ58_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9IJ58_HETAK) HSP 1 Score: 400 bits (1028), Expect = 3.110e-130 Identity = 197/295 (66.78%), Postives = 230/295 (77.97%), Query Frame = 1
Query: 307 GGKTRSDGELKEGIANFYDKSSGIWEEMWGEHMHHGYYVQGVKPKNMEHHRAAQRFMIGRSLEWAGVEEGGAAPKTGVDIGCGVGGSSRAISRRYGTSMTGISLSPVQVERAKTLSEAAGLGDKCKFQVADALNTPFDTDSFDLVWSMESGEHMPYKPKFVGELARICAPGGRVLVVTWCHRDLEEGETELTPKEEKLLAKINKAYYLPRWCSTADYVKYFEGEGLVDIKRADWTDNIQNFWPAVIRSSV-SFQGIVGLLKSGPVTIRGAVAMLLMVRGYKRGLVKFALITGKKP 1188
G R+D ELK+GIA FYD SSG+WE++WGEHMHHGYY +GVK H+ AQ MI RSL+WAGV + VD+GCG+GGSSR I+RRYG TGI+LSPVQ RA LSEA GLGD+C+FQVADALN PF+ +SFDL+WSMESGEHMP K KFV LAR+CAPGG+VLVVTWCHRDLE GE LTPKEE+LL +INKAYYLPRWCS ADYV Y E GL DIK ADWTD IQ FWPAV+RS++ S + G+L+SGP T+RGA+AML M++GY RGL+KF LIT KP
Sbjct: 56 GSSERTDKELKDGIAGFYDASSGVWEDVWGEHMHHGYYPEGVKVD----HKEAQIDMINRSLDWAGVVKADNV----VDVGCGIGGSSRHIARRYGGRTTGITLSPVQAARATALSEAQGLGDRCRFQVADALNMPFEENSFDLIWSMESGEHMPEKEKFVQGLARVCAPGGKVLVVTWCHRDLEPGEAGLTPKEERLLNRINKAYYLPRWCSVADYVAYAEAAGLADIKTADWTDRIQAFWPAVVRSALGSPRNFWGMLRSGPKTVRGALAMLWMIQGYNRGLIKFGLITATKP 342
BLAST of mRNA_Ecto-sp13_S_contig1270.2235.1 vs. uniprot
Match: A0A2V0P4Y4_9CHLO (Gamma-tocopherol methyltransferase n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P4Y4_9CHLO) HSP 1 Score: 361 bits (926), Expect = 2.980e-115 Identity = 176/287 (61.32%), Postives = 217/287 (75.61%), Query Frame = 1
Query: 328 GELKEGIANFYDKSSGIWEEMWGEHMHHGYYVQGVKPKNMEHHRAAQRFMIGRSLEWAGVEEGGAAPKTGVDIGCGVGGSSRAISRRYGTSMTGISLSPVQVERAKTLSEAAGLGDKCKFQVADALNTPFDTDSFDLVWSMESGEHMPYKPKFVGELARICAPGGRVLVVTWCHRDLEEGETELTPKEEKLLAKINKAYYLPRWCSTADYVKYFEGEGLVDIKRADWTDNIQNFWPAVIRSSVSFQGIVGLLKSGPVTIRGAVAMLLMVRGYKRGLVKFALITGKKP 1188
G+LK+GIA FYD+SSG+WEE+WGEHMHHGYY G PK+ ++ AQ MI +L+WAG+EEG PKT VD+GCG+GGSSR I+R+YG + GI+LSPVQ RA +SE AGLGDKC FQVADAL PF SFDLVWS+ESGEHMP KP FV ELAR+ APGGRV++VTWCHR L GE L P+E+ LL +I +AYYLP WCS ADY + FE EGL IK DW++ + FW VIRS+++ +GI GL K+G TI+GA+ M LM +G++ GLVKF LIT +KP
Sbjct: 57 GDLKQGIAQFYDESSGLWEEVWGEHMHHGYYPAGGPPKS---NQQAQIDMIEETLKWAGMEEG-RPPKTMVDVGCGIGGSSRHIARKYGCTAKGITLSPVQAARANAISEKAGLGDKCSFQVADALQQPFPDGSFDLVWSLESGEHMPDKPAFVRELARVTAPGGRVIIVTWCHRVLAPGEAGLKPEEQSLLDRICEAYYLPAWCSIADYQRLFEAEGLTGIKTTDWSNEVAPFWGEVIRSALTTKGIAGLFKAGWTTIKGALVMPLMAQGFRMGLVKFVLITAQKP 339
BLAST of mRNA_Ecto-sp13_S_contig1270.2235.1 vs. uniprot
Match: A0A0D2MKE8_9CHLO (Methyltransferase type 11 n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2MKE8_9CHLO) HSP 1 Score: 360 bits (924), Expect = 5.170e-115 Identity = 177/291 (60.82%), Postives = 219/291 (75.26%), Query Frame = 1
Query: 331 ELKEGIANFYDKSSGIWEEMWGEHMHHGYYVQGVKPKNMEHHRAAQRFMIGRSLEWAGVEEGGAAPKTGVDIGCGVGGSSRAISRRYGTSMTGISLSPVQVERAKTLSEAAGLGDKCKFQVADALNTPFDTDSFDLVWSMESGEHMPYKPKFVGELARICAPGGRVLVVTWCHRDLEEGETELTPKEE-----KLLAKINKAYYLPRWCSTADYVKYFEGEGLVDIKRADWTDNIQNFWPAVIRSSVSFQGIVGLLKSGPVTIRGAVAMLLMVRGYKRGLVKFALITGKKP 1188
+LK+GIA FYD+SSG+WEE+WGEHMHHGYY G PK+ ++ AQ MI +L WAGV+ PKT VD+GCG+GGSSR I+R+YG + GI+LSPVQ RA +SE AGLGDKC FQVADAL+ PFD SFDLVWS+ESGEHMP KP+FV ELAR+CAPGGRV++VTWCHR L+ GE L +E LL +I +AYYLP WCS ADY + FE EGLVD+K ADW++ + FW VIRS+++ +GI GL K+G TI+GA+ M LM +G++ GLVKF LIT KKP
Sbjct: 51 DLKKGIATFYDESSGLWEEVWGEHMHHGYYPAGGAPKS---NQQAQIDMIEETLSWAGVDT---PPKTMVDVGCGIGGSSRHIARKYGCTAKGITLSPVQAARANAISEKAGLGDKCSFQVADALHQPFDDGSFDLVWSLESGEHMPNKPQFVRELARVCAPGGRVIIVTWCHRVLQPGEERLNAEELVGALLSLLDRICEAYYLPAWCSIADYQRLFEAEGLVDVKTADWSNEVAPFWTEVIRSALTTKGIAGLFKAGWTTIKGALVMPLMAQGFRMGLVKFVLITAKKP 335
BLAST of mRNA_Ecto-sp13_S_contig1270.2235.1 vs. uniprot
Match: A0A7S4J028_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J028_9STRA) HSP 1 Score: 357 bits (916), Expect = 1.580e-113 Identity = 177/294 (60.20%), Postives = 215/294 (73.13%), Query Frame = 1
Query: 313 KTRSDGELKEGIANFYDKSSGIWEEMWGEHMHHGYYVQGVKPKNMEHHRAAQRFMIGRSLEWAGVEEGG--AAPKTGVDIGCGVGGSSRAISRRYGTSMTGISLSPVQVERAKTLSEAAGLGDKCKFQVADALNTPFDTDSFDLVWSMESGEHMPYKPKFVGELARICAPGGRVLVVTWCHRDLEEGETELTPKEEKLLAKINKAYYLPRWCSTADYVKYFEGEGLVDIKRADWTDNIQNFWPAVIRSSVSFQGIVGLLKSGPVTIRGAVAMLLMVRGYKRGLVKFALITGKKP 1188
K R+ +LK GIA FYD+SS +WE++WGEHMHHGYYV P++ H AQ MI SL+WAGV G P VD+GCG+GGSSR I+R+YG S GI+LSP Q +R L+ GL D+C+F+VADAL+ PF + FDLVWS ESGEHMP K KFV EL R+ APGGR+++VTWCHRDLEEGE LT KEEKLLAKIN+AYYLPRWCS DYVK E G V IKR DW+ I FW AVI+SS+S + +VGL+KSG TIRGA AM LM++G+ GL+KF +IT +KP
Sbjct: 65 KERNREDLKIGIAGFYDRSSKLWEDIWGEHMHHGYYV----PEDRTDHIQAQIDMIDESLKWAGVPNEGEPGTPSKVVDVGCGIGGSSRHIARKYGASTKGITLSPYQAQRGNELASEQGLADQCEFRVADALDMPFHDEEFDLVWSFESGEHMPDKTKFVDELCRVVAPGGRIILVTWCHRDLEEGEESLTKKEEKLLAKINRAYYLPRWCSVDDYVKLLEERGAVGIKRDDWSYTIAPFWKAVIKSSLSLKSVVGLMKSGFSTIRGAYAMFLMLKGFNMGLIKFGMITCQKP 354
BLAST of mRNA_Ecto-sp13_S_contig1270.2235.1 vs. uniprot
Match: A0A7S4BL88_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BL88_CHRCT) HSP 1 Score: 358 bits (918), Expect = 1.960e-113 Identity = 171/290 (58.97%), Postives = 218/290 (75.17%), Query Frame = 1
Query: 319 RSDGELKEGIANFYDKSSGIWEEMWGEHMHHGYYVQGVKPKNMEHHRAAQRFMIGRSLEWAGVEEGGAAPKTGVDIGCGVGGSSRAISRRYGTSMTGISLSPVQVERAKTLSEAAGLGDKCKFQVADALNTPFDTDSFDLVWSMESGEHMPYKPKFVGELARICAPGGRVLVVTWCHRDLEEGETELTPKEEKLLAKINKAYYLPRWCSTADYVKYFEGEGLVDIKRADWTDNIQNFWPAVIRSSVSFQGIVGLLKSGPVTIRGAVAMLLMVRGYKRGLVKFALITGKKP 1188
RS EL++GIA FYD SSGIWE +WGEHMHHGYY K ++H+ AQ MI +L+WAG ++ PK+ +D+GCG+GGSSR I+R+YG + GI+LSPVQ RA+ LS+AAGLGD +FQVADAL+ PF+ +SFDL+WSMESGEHMP K +F+ EL+R+C PGGR++VV WCHRDL GET+L P+EE+LL +IN+AYYLPRWCS ADY K GL I+ DWTD ++ FWPAVI S+ ++GL +SG TIRGA+ M LM+RG +RGLVKF L+T KP
Sbjct: 71 RSPEELRKGIAKFYDSSSGIWERVWGEHMHHGYYNDNEK----KNHQEAQVDMINEALKWAGADDN--PPKSVLDVGCGIGGSSRVIARKYGNTGAGITLSPVQAGRAQALSDAAGLGDALQFQVADALDMPFEDNSFDLIWSMESGEHMPDKRQFISELSRVCKPGGRIIVVAWCHRDLLPGETQLLPREERLLRRINRAYYLPRWCSVADYAKLASDFGLEQIRTDDWTDRVKRFWPAVILSAFRPNSLLGLFRSGFTTIRGALVMPLMIRGQRRGLVKFGLMTAVKP 354
BLAST of mRNA_Ecto-sp13_S_contig1270.2235.1 vs. uniprot
Match: A0A1Y1HH78_KLENI (S-adenosyl-L-methionine dependent methyltransferases n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HH78_KLENI) HSP 1 Score: 352 bits (903), Expect = 1.770e-111 Identity = 172/286 (60.14%), Postives = 212/286 (74.13%), Query Frame = 1
Query: 331 ELKEGIANFYDKSSGIWEEMWGEHMHHGYYVQGVKPKNMEHHRAAQRFMIGRSLEWAGVEEGGA-APKTGVDIGCGVGGSSRAISRRYGTSMTGISLSPVQVERAKTLSEAAGLGDKCKFQVADALNTPFDTDSFDLVWSMESGEHMPYKPKFVGELARICAPGGRVLVVTWCHRDLEEGETELTPKEEKLLAKINKAYYLPRWCSTADYVKYFEGEGLVDIKRADWTDNIQNFWPAVIRSSVSFQGIVGLLKSGPVTIRGAVAMLLMVRGYKRGLVKFALITGKK 1185
EL EGIA FYD+SSG+WEE+WGEHMHHGYY +G K + HR AQ MI +L+WAG G APKT VD+GCG+GGSSR +SR++G +TGI+LSPVQ RA L+ GL DK FQVADALN PFD FDLVWSMESGEHMP K KFV EL R+ APGGR+++VTWCHRDL GET L E LLAKI AYYLP WCS ADY++ + GL ++ DW++ + FWPAV+ S++S++G++GL KSG TI+GA AM LM++G+ RGL+KFALI+G K
Sbjct: 80 ELNEGIAGFYDESSGVWEEIWGEHMHHGYYPKGEK----KDHREAQIDMIEETLKWAGATGAGTPAPKTVVDVGCGIGGSSRYLSRKFGAKVTGITLSPVQAARAGALARQQGLADKVSFQVADALNQPFDDGQFDLVWSMESGEHMPDKTKFVNELIRVAAPGGRIIIVTWCHRDLAPGETGLQSDELDLLAKICDAYYLPAWCSAADYIRIAKAAGLQNVISDDWSERVTPFWPAVMASALSWRGLLGLAKSGWTTIKGAFAMALMIQGFSRGLIKFALISGTK 361
BLAST of mRNA_Ecto-sp13_S_contig1270.2235.1 vs. uniprot
Match: A0A2G3AFP9_CAPAN (Tocopherol O-methyltransferase, chloroplastic n=6 Tax=Solanoideae TaxID=424551 RepID=A0A2G3AFP9_CAPAN) HSP 1 Score: 352 bits (902), Expect = 2.950e-111 Identity = 170/287 (59.23%), Postives = 220/287 (76.66%), Query Frame = 1
Query: 331 ELKEGIANFYDKSSGIWEEMWGEHMHHGYYVQGVKPKNMEHHRAAQRFMIGRSLEWAGVEEGGAAPKTG-VDIGCGVGGSSRAISRRYGTSMTGISLSPVQVERAKTLSEAAGLGDKCKFQVADALNTPFDTDSFDLVWSMESGEHMPYKPKFVGELARICAPGGRVLVVTWCHRDLEEGETELTPKEEKLLAKINKAYYLPRWCSTADYVKYFEGEGLVDIKRADWTDNIQNFWPAVIRSSVSFQGIVGLLKSGPVTIRGAVAMLLMVRGYKRGLVKFALITGKKP 1188
ELK+GIA+ YD+SSGIWE++WG+HMHHGYY + + HRAAQ MI ++L++A + E A T VD+GCG+GGSSR ++++YG + GI+LSPVQ ERA+ L+ A GLGDK FQVADALN PF FDLVWSMESGEHMP K KFVGELAR+ APGG +++VTWCHRDL E LTP+E++LL KI KA+YLP WCSTADYVK + L DIK ADW++N+ FWPAVI+S+++++G +L+SG TI+ A+AM LM+ GYK+GL+KFA+IT +KP
Sbjct: 83 ELKKGIADLYDESSGIWEDIWGDHMHHGYYEPNSSVE-LSDHRAAQIRMIEQALKFADLNEDPAKKPTSIVDVGCGIGGSSRYLAKKYGATAKGITLSPVQAERAQALAAAQGLGDKVSFQVADALNQPFPDGQFDLVWSMESGEHMPDKEKFVGELARVAAPGGTIILVTWCHRDLSPSEESLTPEEKQLLNKICKAFYLPAWCSTADYVKLLQSNSLRDIKAADWSENVAPFWPAVIKSALTWKGFTSVLRSGWKTIKAALAMPLMIEGYKKGLIKFAIITCRKP 368
BLAST of mRNA_Ecto-sp13_S_contig1270.2235.1 vs. uniprot
Match: A0A7S1B3A8_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B3A8_9STRA) HSP 1 Score: 352 bits (902), Expect = 2.950e-111 Identity = 176/293 (60.07%), Postives = 212/293 (72.35%), Query Frame = 1
Query: 313 KTRSDGELKEGIANFYDKSSGIWEEMWGEHMHHGYYVQGVKPKNMEHHRAAQRFMIGRSLEWAGVEEGGAAPKTGVDIGCGVGGSSRAISRRYGTSMT-GISLSPVQVERAKTLSEAAGLGDKCKFQVADALNTPFDTDSFDLVWSMESGEHMPYKPKFVGELARICAPGGRVLVVTWCHRDLEEGETELTPKEEKLLAKINKAYYLPRWCSTADYVKYFEGEGLVDIKRADWTDNIQNFWPAVIRSSVSFQGIVGLLKSGPVTIRGAVAMLLMVRGYKRGLVKFALITGKKP 1188
K RS ELK GIA FYD+SS +WEE+WGEHMHHGYYV P+N H AQ +I L W+G++ P + VD+GCGVGGSSR I+R+YG GI+LSP Q R L+ GL D C ++VADAL PFD D+FDLVWS+ESGEHMP K KFVGEL R+ APGGR+++VTWCHRDLEEGE +LT KE+KLLAKIN+AYYLP WCS ADYV E G DI+R DW+ I FW AVI+SS++F+ +VGL KSG T RGA AM LM+RG+ +GL+KF LIT KP
Sbjct: 74 KERSREELKVGIAGFYDRSSKLWEEVWGEHMHHGYYV----PENRTDHVQAQIDLIDEVLAWSGIDS---PPSSVVDVGCGVGGSSRHIARKYGCERAEGITLSPYQAARGNELAVETGLADACTYRVADALEMPFDDDAFDLVWSLESGEHMPEKTKFVGELLRVAAPGGRIIIVTWCHRDLEEGEKDLTKKEKKLLAKINRAYYLPPWCSVADYVTMLEERGAKDIRRDDWSHIIAPFWKAVIKSSLNFKSVVGLAKSGFSTQRGAYAMFLMLRGFNKGLIKFGLITCTKP 359
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Stop | 1 |
| Start | 1 |
| Seed ortholog score | 756.1 |
| Seed ortholog evalue | 8e-216 |
| Seed eggNOG ortholog | 2880.D8LHY0 |
| Preferred name | TMT |
| Model size | 2301 |
| KEGG rclass | RC00003,RC01662 |
| KEGG ko | ko:K05928 |
| KEGG Reaction | R07236,R07504,R10491,R10492 |
| KEGG Pathway | ko00130,ko01100,ko01110,map00130,map01100,map01110 |
| KEGG Module | M00112 |
| Hectar predicted targeting category | chloroplast |
| GOs | GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006766,GO:0006775,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0009058,GO:0009110,GO:0009507,GO:0009536,GO:0009987,GO:0010189,GO:0016740,GO:0016741,GO:0018130,GO:0032259,GO:0042360,GO:0042362,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050342,GO:0071704,GO:1901360,GO:1901362,GO:1901576,GO:1901615,GO:1901617 |
| Exons | 11 |
| EggNOG free text desc. | sterol 24-C-methyltransferase activity |
| EggNOG OGs | COG0500@1,KOG1269@2759 |
| Ec32 ortholog description | Gamma-tocopherol methyltransferase |
| Ec32 ortholog | Ec-18_000910.1 |
| EC | 2.1.1.95 |
| Cds size | 1191 |
| COG Functional cat. | Q |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko01000 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1681462678.5731363-UTR-Ecto-sp13_S_contig1270:3882..4992 | 1681462678.5731363-UTR-Ecto-sp13_S_contig1270:3882..4992 | Ectocarpus species13 EcNAP12_S_4_19m | UTR | Ecto-sp13_S_contig1270 3883..4992 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1681462678.585324-CDS-Ecto-sp13_S_contig1270:4992..5058 | 1681462678.585324-CDS-Ecto-sp13_S_contig1270:4992..5058 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1270 4993..5058 - |
| 1681462678.5932157-CDS-Ecto-sp13_S_contig1270:6614..6716 | 1681462678.5932157-CDS-Ecto-sp13_S_contig1270:6614..6716 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1270 6615..6716 - |
| 1681462678.610775-CDS-Ecto-sp13_S_contig1270:7230..7345 | 1681462678.610775-CDS-Ecto-sp13_S_contig1270:7230..7345 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1270 7231..7345 - |
| 1681462678.622884-CDS-Ecto-sp13_S_contig1270:8054..8180 | 1681462678.622884-CDS-Ecto-sp13_S_contig1270:8054..8180 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1270 8055..8180 - |
| 1681462678.6331027-CDS-Ecto-sp13_S_contig1270:8461..8553 | 1681462678.6331027-CDS-Ecto-sp13_S_contig1270:8461..8553 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1270 8462..8553 - |
| 1681462678.64485-CDS-Ecto-sp13_S_contig1270:9381..9441 | 1681462678.64485-CDS-Ecto-sp13_S_contig1270:9381..9441 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1270 9382..9441 - |
| 1681462678.6532497-CDS-Ecto-sp13_S_contig1270:9701..9784 | 1681462678.6532497-CDS-Ecto-sp13_S_contig1270:9701..9784 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1270 9702..9784 - |
| 1681462678.661374-CDS-Ecto-sp13_S_contig1270:12171..12260 | 1681462678.661374-CDS-Ecto-sp13_S_contig1270:12171..12260 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1270 12172..12260 - |
| 1681462678.669352-CDS-Ecto-sp13_S_contig1270:13293..13428 | 1681462678.669352-CDS-Ecto-sp13_S_contig1270:13293..13428 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1270 13294..13428 - |
| 1681462678.680973-CDS-Ecto-sp13_S_contig1270:14476..14691 | 1681462678.680973-CDS-Ecto-sp13_S_contig1270:14476..14691 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1270 14477..14691 - |
| 1681462678.690937-CDS-Ecto-sp13_S_contig1270:16948..17056 | 1681462678.690937-CDS-Ecto-sp13_S_contig1270:16948..17056 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig1270 16949..17056 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1270.2235.1 >prot_Ecto-sp13_S_contig1270.2235.1 ID=prot_Ecto-sp13_S_contig1270.2235.1|Name=mRNA_Ecto-sp13_S_contig1270.2235.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=397bp
MKTAVPVHVLWAGFCALWPCHAFVPSSSLPSFGVHSGIDGTTASSFDRNG HGHDCGYGAAGSARGKGRRRAAPSRARAQGDVSMGLRGAAKNTWKRARGG GNGGKTRSDGELKEGIANFYDKSSGIWEEMWGEHMHHGYYVQGVKPKNME HHRAAQRFMIGRSLEWAGVEEGGAAPKTGVDIGCGVGGSSRAISRRYGTS MTGISLSPVQVERAKTLSEAAGLGDKCKFQVADALNTPFDTDSFDLVWSM ESGEHMPYKPKFVGELARICAPGGRVLVVTWCHRDLEEGETELTPKEEKL LAKINKAYYLPRWCSTADYVKYFEGEGLVDIKRADWTDNIQNFWPAVIRS SVSFQGIVGLLKSGPVTIRGAVAMLLMVRGYKRGLVKFALITGKKP* back to topmRNA from alignment at Ecto-sp13_S_contig1270:3883..17056- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp13_S_contig1270.2235.1 ID=mRNA_Ecto-sp13_S_contig1270.2235.1|Name=mRNA_Ecto-sp13_S_contig1270.2235.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=13174bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1270:3883..17056- (Ectocarpus species13 EcNAP12_S_4_19m) ATGAAGACGGCTGTACCGGTGCACGTGCTATGGGCGGGATTCTGCGCCTT
GTGGCCCTGCCATGCATTTGTTCCGTCTAGCAGCCTGCCTTCGTTTGGGG
TTCATTCGGTAAGCGCATCACGGTGCGATTGTAGTGTTTGAAATTTTGCG
CGCAGTGGCGATGATGATGGTGCATGATGATGTCTTCTTCGCTTTGGTCT
GCAGGAGCCAAAGTCCGCCGCTATTGCGCACTGCTGTACTCTGCCGTGCT
TTTCCCAGCGTAAAGTCGTACCAACACGTAATCCTTGCACGTGCGTTGGT
GAGCGCGTCATTCCGACGAAGGAACGTATGTTGTCTTGTTTGAACAAACA
ACGAGTTTTTTTTTTTTTGGAACAATCGAAGCACGCGGTGTGACCTCGAG
GGGAAGGCAGGAGTGGGGGGAGTGGGGCGAGTTTCCGTCATGTTGTCACG
TTGTCACGTTTAGCTTACAGCAGCAGCACCGTTGTCCAACACCGCCCTTT
GCTATAAGCCGACGATGAGTCTCGAAGGCAAGCACCAAGACCAGTTACCA
GCAGCGGCTTTCCCGGACCGTGGGTTGTTGTCAATGTCAAGATATCAAGT
CTGACAATGGGATGTTGCTCCATGTATGAAGCACTCCTGCCGAGCATCAT
CTCCAATGTCGCCCTTGCCCGTCATCGATTCCGGCAGTAGACAGCAGTAG
CGGTCGCACGACTTCGGATATGCCAATCGTACGGGTGCTGTTCTACATGG
CTATCAAGCGTTGTAGTTGCATACACACAGCAATATTGCAATACTGTTCC
GCCACCGTTGGATACTGGTACCGAATCCGGCCCGAATCCGCAAGAGGGGC
CACGCAAACTGCACCTACGGGGCAGCTGCCCCTTCACACCCTACGCTCGA
CACACACACCCCGACTCCTGGATATACTTTCGAGGGCTTTGATGTGATTC
AATGTGAAGTCGTTTTATGGTGCCATCGACTGCCTTACAATGTGGCAAAC
GCAGCGTTCGTGTTGGTGCCCTTCGAGGTTGTCCGTATCTGTTCGAAGGT
GATGTGTCATCGCGGGACGACGCATACAACGAGGATGGTTCTTCTTTGTC
CCAAGAATGCGGTTCTGTGCCATCGGCTACCATGTATTGTAGATACCTCG
TGCCTGGATGAGGAGGAGAACCTCGAAAGTTTCCTCTATCCAAAGAAAAA
TTGTTGACAGAATGAGACACATATTACAGCAGCAGTCCTTTCTACACTTG
GTTTGCACCAAGGGGAGTGAGCAAGTATCAACCAGTTGCAGTCCTAGCTC
CATCTGGCCGGTGGCCTGGGGGGGCAAGAGGCGGCGGCACGGGCTTGGGG
ACGTTAACGAAACAACCCCCGAAGGTTCCATCCTGAGTGTTTCTGTCCGT
CCTTCTCTCAACCCAAAACTACATTTGACTACACTGCCTCTTTCGGCCCC
TTCGATTGGCAAGGCGTGGCACGAGTCGCTAGTTCTCGCCACAACACAAG
CACCCATGGTAGTTTACTCTTCTCCTAGCCGTCACAACCCGGGGGGGTGG
GGTCGTACACAGAGCGCTCTCCATGCAAGACCAAACCCCCCCCGCCATCC
TGGTTCGGTTATGGTTTCTCAACCTTTCTCACGATGACTGGACAAGCTAC
CCCGGAAATAGTTTACCCACTATTTTCAGGCAAGAAATGTTGCAAACACC
AGAGGTGGTAGTGAATACCCCGTTCGAAGGCACACGTTTTGGCGTTTTTG
CCGGTAGTGAGGGATGAGGGACAGATGTCTCTGCTAGATAAATTTCCTGG
CGTGTTCCTTTTTGTTAACCTCGAAATCGACGCGTGTTCTTGGAACGTCT
GCATGCGCACCCCAAGGCTTGCTGGATCTCCACACTTGTGTTTTTTTTTT
TTCGTTTTTAACGGCCGGTTCCTCTGTACCCCCACGACAGCGCTTTCTTC
GGTCAAAGACCGCACACATTCTGCCTTTTTGCATGACACGCAGCTTGGCA
GTAGCTCTCACGAGCGACCCTAGTAGCAGTGCAGCAGACTCTCACCGACC
ATATGCATATTCCTCTTGCACACTGCTACTGCCGTGCATGTTCATCTGTA
CTACCATTGCCACACACCCTACAACCGTTGTTTAATAGTGCGTCTCCGCA
GAGAAGAAACGTCGAAGTCGCGTCGAGGCTCATTTCGTCACCGCACCGTC
GGCTACAGGCCACTTCCTGCCTTTTAAGTAGAGTATGATTCTCGACGGAG
CTGTGTTTCCTGACCCGTTTTCCGTTGTTTCTTTTTCCCGCGAAAGTTTG
AGCCTTCAACGAAGTATTTCTTACACGTGGGCCGGCACCGGTGCATGCCG
TCATCGTCTCTTCAGGGTATCGACGGCACAACAGCGTCGTCTTTTGACAG
GAATGGACACGGACACGATTGTGGATATGGCGCAGCCGGATCGGCGAGGG
GTAAAGGCAGGAGGCGGGCGGCTCCGTCTAGGGCGAGGGCCCAGGGCGAC
GTTAGCATGGGCCTGCGCGGCGCAGCTAAGAACACCTGGAAACGGGCGCG
CGGTGGAGGGAATGGGGGCAAGACACGAAGGTCGGTGGAAGTCTTGCCTG
TGCATGTGTATGTTTAATTTTCTGTTGGGCTTCGACCGCGCTAACCGGCT
GACCAACGAGAATGTGGGTTGTCCCATTGCTGGTGAGAACGCAAGACGCT
TTGTGTGTGTGTCTTTCTTTTCGTTTGCGTCGACCGCGCTGACAGTCGCC
TCATGTTACACCTATGTGGCGATCGATGTTGGGGGTTAAATTACCTCCAC
AGAGGCATGAAGAGACGTGCCTCAGGCAAAACAAGGGTGGCTTATGTGGT
GGCGGCTTCTGCACCACAGTACACCTATATTTCCGAGAAAGGTACCGAAG
GTGACATGACACAAGATACCACACCCCCTGAACCGATTTTGAAAGCTCAA
CTTCTCGACGGCGAAGAGGACGCCAAAAATCCCGTGATGCGGGTTCGGAG
AATCTCGAAAAAGAAGGCTCCAACGCAGCAATTTTCGGCACCACTGATCT
GTTACTCTTGGGAGAAATAAAACGATTGAATAATTTTCCCAGAGGGAGTG
GTATCTCATGTCAGGTGGTACGATAGCAGGTAAAAAGGAAGCAATCCCTA
TACGGGTTGTCCTAGAAGGGCGTCGAGAAGTTCTGTCCAGCCGTCTCTCT
CTCCGATCACAGCGGTCTTCGAGACAAGCGACAGCAGCATCTAGGGTCGC
TGTAAAGTGCGGGGGGAAACTTGTGGGTTGCGTCGTAGCTTGCGGTCTTC
TTATGTTGATGTTTTCTGACGTCTGCTCAGGATTTTTCTCCGGCGCGCAA
GAGCGATAGATCATTTGCATCTCTGACGGGAGTTGGCCTGTATCCACGGA
AGGCGGTCCGTCCGCGTCTTTTGGACCGGCAGATGTTACGATTATTTTGA
GGAGAGACTGGAACGGTTTTCTAACGTAAGATACCTACAAACGAGAACGG
CAGCAGCAGCTACAGTAACAAGATTGAATGGCAGCAGCAGCAGCAGCAGC
AACAACAATAGCTACAGCGACAACAACCTGAACATTCACTCGTCGTATGC
CCCGATACCCCCAAAATCACCCAAACAGCGACGGCGAGCTCAAGGAGGGC
ATAGCCAACTTCTATGACAAGTCTTCTGGTATCTGGGAAGAAATGTGGGG
GGAGCACATGCACCACGGCTACTACGTCCAGGGGGTGAAGCCCAAGAACA
TGGAGCACCATAGGTGGGTGAGAGGGGTTGCTCGTGTCCACAAATCGCAA
ATCTCGTATGCAGGACACGAACAGCCAACGCTGGAAACCCAGGCTTGGTT
TCTGAACTCGATGTCTAGAGTTTATTTGGCCCCCTTTCAAGGAGGGCGCG
AGAGCGTGGAACCGTCGCTTGTCGAGTGTGTGTCCAGCAGCCAGAGCCAG
TTTCCCTTACTGTAGGTGATGCAAGATACCACATCCCCTGGACCGATTTT
GAAAGCTCGACTTCTTCAGGACGAGGAGGATGCGTTGATGAAACGATGCG
TTTTTCGGAAAGCTCTCGACGAGACGACTTCCGCGCCGCCGCCATGTTCG
GCGCTGCTGCCACTCTTGATGCTTATGGAGAGTATCGAAATGTTCAAATC
GGTCGCAGGGGGTGTGATATCTTACGTCACGTCACCGACGTTATTGTTGG
CAACCACGGGGCCGCGTCTGGTTCTGTTTTTGGCAAGGTTAACCGCACCC
TTCATGCAACTTCCAGAGGCTAACCGGACATGATGTGCATTCACCATGGT
ATTGCACGCCTTCTAGCAAGCGGGCTAGATGTCTCCACATTAGCAGCAAG
AAAGCGTCAGCGTTGAATGTTGAAATGAGAAACCGGGTCTACTTGAATGG
ATTTTGGCTGCAGCGATCTGCCCTTCCAGAGCTTTGCGCTGGCGTGGATC
TTCCTCGCCCCCCATATGTCTTGACGCACGTTTTGCCTCATTTCTATTTT
GTCTCGTCGTTTACCTTATGTGTCCTCTCTCTCTCTCTCTCTGTGTGTGT
GTGTGTGTGTCTCTCTCTGTCGCTGTCTCTCGTTCTCTTTTATCTATGTG
TCTCCCGCCCACTCTTTCGACTGGCTGCCTCTCTTTCACTCTCTGTTCTA
CGTCTCTCTTTCTCTGTTCCTCTCTTCTCTGTCGTCTCTAGTCCTGACGT
CTCCAACCCTGACATATGTTTTTCCTATAACCTTCCCCTGTTGCCATGAA
CCGTTTTTTCGCCTTCCATTTTTCGTCTCGCCCCTCATCTTGCCAGGGCA
GCCCAGAGGTTCATGATCGGTCGTTCGCTTGAATGGGCAGGTGTAGAGGA
GGGAGGGGCAGCCCCCAAAACGGGAGTCGACATTGGTGAGTGACCCCCAA
CGGCAAAGCCACACGCGAATGGCAACATCGGGCGCCAAGAAATCTCCCGC
AATTATTTATTTATTCTTACACCGCTTTTTATGGCAGCACAATGCTGCAA
GAAAAGCTGCAAACTTTTTCTGCAGCTTTTCTTCCAAACTTTGTCAATGG
AACCTTGATGCACGCTCTTTATGGGACAAAGAAAAGTTTTGTGCACGGGA
TTGGCGGAATGCGGAGGCGTGATATATTTTTTTTAGCAACGGAGAGAAGG
CACGCGCCTTTCATATTGCACCTCCAAAGAAGAAGCGGTTAAAAAGCGTG
CGGGAGAGTGTAGTTGAAACCTTTTTTCTCCACACTCACGATACCCTAAG
GCATCTAACCTGGTACCAGAAAGATGCTGGGAATGGCTAGCTCCCTCGGG
GTGGCATTGCTGTTGCTGTTGCCTTCTTCTTCGAAAAGTTGTCGCTGGAA
AACCAAACGATGCGCACACAATCCCTTCGAACTAGAACCAGCTGATGTCT
GAAGTGGGTACTTTGGGGTCGATCAAAACTTTTTTCCCGATGCGCACGAT
ACCCCACGGCATGAAACCTTGGGCATGAAAGATGAAGCACAGAGCTACCT
CCCACCGAGCGGCCTTGCTATTGCTGTTGCTTCCTCCTTCGGAAAGTTAT
CGGTGGATAACCAAACCCGTGGCGGTCAAAAACATCGAGCTTGAACCAAC
CGCTAGAGGCCGTTGACGGCACAAACTTTTTTTCCCGGCACATTCAAATT
CGGCACCTCACGGCCGTAAACCTTGGCATTGCCCAACAGCCCATGGCATC
ACCTCCTTCCAGATACCATTCACAAGGCAACTCGTTGAGTTTCCGTCGAG
CTTTCGGTGATCACAGCCTTCCCACCATCGATGCTGCAGAGGGTCTACGT
GTGCGGTAGGGGTAGCAGCTTGACGTGAACCGGTACAGTTTACGCCGTGC
AGCTTTTCTCGCCCCTTCCCGACTCGAGAAAAGCTGCAAAACTTTTCGGC
CAAACTGCAGCTTTTCGCTCCGGAAAAAAAGTTGCAGAACTTTTCGTGCA
ACTTTTAACTCCCATACCGAGCGTACATGTGCAAAGCTGCAAGAAAAGTT
GCAGAAATGCAGCTTTTTTTGCATCATTGTGCTGCCGTAAAAAGCGGTGT
TAGAGCATGTTGCAATCATCGATATTCTGGGCGTCCGAGTAGACACTTTT
TTTATTTTTGCACCAGCCGAGGTTCTCCAGGAAGAAGGTGAGCAAAGAAC
AGAGGATGTTTCTCTTCTCCACACATTTTTTTCACTTACGGTGCTAGCCT
TGATGTTTCTCGAACGCGAGAAGGGTTCAGTCGTCATTCACCGGTCCGCT
CCCCCTCTGTTGTGTGTGCTTGCATCACTCGACTGACTGCCGTGCGCTGT
TGTAATGCATACATGCGTCCGTTCACCTGTAAATTGCCACTTTTTTTTTT
CATTTTTTCTCGGTCTGGGGAGATCATACCCCACCAAACGGTTTTGGGAG
GATGCAAGCTGAGCCCCGTAGCCCCCAGGGGGTGATCGGCTTTAACAGTC
AGTCTGATTTGGGTTCGTTCATAATAGCTGCGCGCACTTCTGTATGTGAC
GCAAGATACCACACCCCCTTGACCGATTTGGTCAAAGTTCAATTCCTCCA
CGGCAGCAAGAGAGTGGCGGTGCCGAAGGTGGTGGCATTGCAACCTTAAC
CTTCTCGCCGAAAGCTTGCAGAACACGTACCGTTTACGCGATGCATCCTC
TTTGCTGAGGAGAAATCGAGCTATGACAAATCGGTCCAGGGGGTGTGACA
TTTCCTGCGGTACGCGGTTGATTGTTGTTTGCACGTGGTGGGATTGGCTG
GTGGCCACGAAATGTTGATTGGCGTGATTGTCGCTTCACTTGCAGACGTG
GACAGAGTGACGCCGAACAAATCGAAGATGAGTGAATTGTGTATGTACGG
CAGCACATTCCCCTCACGGTGCTGGTGCGTGTTGGTGCTCTTTTACTTCC
CCGGTCACCACTCTCTCGGAATGCTGCCGTCCATTCCCCTCTCGTTAGTT
GTGGTGATGCACGGGTTGTGTTGTATGGTCATGCAATTAGTGATTTTTGA
ACGAAGATTATCCGATCACGATAAGTGGGTCTTGCAGCAGCCTTGATCTC
TTGGTGCCGAGGTGCGTGTGTAGTGATGCTGTGTTGTGGTGATTTTGCGG
TGATCGTTCCCATGCTGATACCTGTACGCTGCTGCTGCTGTGCTGCTGCT
GCTGTTGTTGCTGTTGTTGTTGACGTTGCTGCTGCTGCTGCTCTGTTGTT
GTTGTTGTTGTTGCTGCTGCTGCTGCTGCTGCTGCCGGCGGTCGTGGTGG
TCGTGTGGTGTGGCCATGTCAGGGTGCGGTGTGGGCGGTTCCTCTCGGGC
CATCAGCAGGAGGTACGGCACCAGCATGACGGGCATCTCTCTCTCTCCGG
TGCAGGTAAGCAAGCCGGCTCTCCCTCTTGCTCCAAATGCCCTTGTCGGC
AGACGAGTGTATCAATCTTTTTCTCCATCGCCATGTGGGTGAAGGTCAAC
CGACCCTTCAGCTCGCATCAGGAGGTTGGCTCCTCATCAGTGGTGCATCA
CGAGTGTGTTCTCAGAGTGCATCAGGGATGGCTCTCTTTAAGAATGGTTG
CCTGCGTTGTTCTGTCTATACTTTTCGGCTGGCATTTTTTGTCGTTTTCG
AATGGTTTTTCGCAGGTGGAGAGAGCAAAAACCCTGTCTGAAGCGGCGGG
TCTTGGAGACAAGTGCAAGTTCCAGGTACGGACGCTTGGGTGCGTTGGGG
CATGATTCTTGTTGACGTTGCTTGCAGGATCGATAGAAACGATGCACAAA
GCGCTACGTATTCTGCTTTTGTTCAGTTTGGCTGTCACAAGGGGTGTATT
ACCGCTTGACTTGGGCGGCTGAATTGGCGTTTCTTCCTCTGCGCATCATT
CGCGCAAACCATTTCTGGCCGAAACAAGGCCTAGCAGCCACAACGGCCAT
GCCAACAGCCAAAAGCACCAGTTTCAAAGACACCAACGGCCTTCTGCACG
TGCCTCGTGCCTTTTCAACGTGGACACGACGACCGTACGGCATAGTTCGG
ACATGGCACAGATGCAAATGTTTCTAGCGTTCGCCCCTTACTTTTTCGTC
AGTCGTTTTGTGTTTTTATCGATGTCGTTGTTTATCGTTCTGTTGAATCA
CCACAAGTACAATCATCATCTGTGCTGACGGGAAGTACTACAGGGGCTAC
GGTGTAAGAGAAACTTAGGTAACCATTTAAGAGGAAGCACGGATTATAGG
GGAAAGAGGTGGATTGTACCGACCATGAGAAACACACCTGGTACACACCA
TCATACGAGATGCGGTTTAAGAGAAACCACGGTTAACCCGTGTGTGTTGG
GTTGCAAGAAACTTTCTTTGAACCGTTGCCGCTGCGCCAATTGGAACATG
AGGCCTGCTTGGCTGAGAAGAAACTCTCTTCATGCCGTAGCCGCTACTCT
GCTTGGAACACGAGTCCTGCGACACTAATGTTGCACCTCGCTGCTGCTGC
TGCTGCTGCTACGACCGCTTCTGCCGTTTTTTGGTTGTCTTGTTCTTGGA
TAGGTGGCCGATGCCTTGAACACACCCTTCGACACCGACTCTTTCGACCT
TGTTTGGAGCATGGAGAGCGGAGAGCACATGCCCTACAAGCCCAAGTGAG
ACAGACTTGCGATTCGCATACCCTCATTCAGCTGTACCGTTTTAACGCGC
CTCCGCAACGGTCACATGAAGTTGGCAGTAGCAACAGCCGCACAACACGC
TAAAACCCTCACAATCATCATCTTGGTCCACTTTCTGCGCGCTCGATATC
TTGGCGGGCAAGAGTATCATGACTCCTGAATGCGAAGCTTCTGTTGCAGT
CACTTTGACATACAGAGCCTTTCTTTAACTAGCACCAACCACACTAACTG
ACAGACAAACGATTTTTTTTTTTCAGGTTTGTTGGAGAATTGGCCCGCAT
CTGCGCCCCGGGGGGGCGTGTGCTCGTTGTAACGTGGTGTCACCGCGATC
TGGAGGAGGGGGAGACCGAGCTCACCCCTAAGGAAGAGAAGCTTCTCGCA
AAGTAAGAAGTAGCCTTGTGTGCTCTTTCTTTGTACCATTCCGGCAAAGG
ACCTCGTTTAGATTTTCCTAGAAGCGGCCGATCGGCCTAGGTAAGAGAAG
CGCGCCCCTGAAGCTTCTGGCAAAAGAGAATAACCTTGGGTGTACTCTGT
AGAGCAGCACCACAAGAAAGGGTGCGACGCCTGCAGAGTATTCCGAGAAA
CTCATCTCTCGGTGGAGTAAAGAATCGTGCAGTGCAGACGGGGACATGAC
AAGCTTGCACGCTTGCGAAGCCCTTAAAAGAGTAGCCGACGCACGCCTGG
AAGAACGATTTGTGGTTTTTGCTGTTTCGGTTTGCAGAGAGTGAGATGGG
GTGGGAGGTGTTGGCGTCGGAATCAAGAGGACCGGCCACAAATCGCACCG
GATCTCACGGATGCTGATGCAAAGGCGGATTTGCTTTGGTCCGTATTTTG
GTTGTGTCTTTCGACTACGGAAACACAAATGCCGCACGCAACAGAAGACA
GCGCACCCCCTCCCACTGCCACACGCGGTGGCACTGTGTTTGTGGTTCAA
CATGAGCCCAAAACATTGAACGACAATAATACGCCGACGTAGAATACCAC
CGCCCCCGTAAGAGGACATACATATTTTTTGTACATGTTGTACGGACTCT
TGACTCTTGGTACCTCGTGCAACGCCTTTTAATTACATGAAAACGGAAAA
AAACAAAACAGGATCAACAAGGCGTACTACCTGCCGCGATGGTGCTCCAC
CGCTGACTACGTCAAGTACTTCGAGGGCGAGGGGCTCGTCGACATCAAGA
GAGCAGACTGGACGGACAACATCCAGGTTGGTTTGATGGCCTCATTGTCG
AAGAGCATGTCCATGAAGATTCTGCTTGCTCATGCATAAGCGTCGTGTGA
GGCAAAAGCAACGATGCCGGAGGGCAGAATGGGCTGCACCTATGCGTGAT
GGTAGAATGTTGCACAAGAGCCTTCGGCCTCCCGTTTTTTTTGCGGAATT
TATTGTCCCTCCCCTTGAGTATCATCTTTGAAAAGGTAGCCGCCGTTATG
CCGCGAAGGTTAGTCTAGTATGTCGTCTCTACGTCATTCGGTGCCGTGTG
ATGCCTTCTGCCCCACCCAGCAATATCTCTCTGAGCCGTTCTCTGAGCCG
TTCTCGGGGCCGATGTACTAATCATGCTCTCTGGTCGTGTTATTGATCGA
TGCTTGTTCGCAGTTTTTTCCACCCGCCCCTCTCACACCCTTTTTTGTAC
TTTTTTTTCCGAATTTCCGTGCTCTGACCGACCTCCTGCTCGTTTTGCGA
ACCAATCTTCGAACGGTTCTACAAACGGTTCTCGGAACAGAACTTCTGGC
CGGCTGTCATTCGATCTTCGGTGTCTTTTCAAGGCATCGTGGGCTTGCTA
AAGTCGGGGCCTGTTACCATCCGTGGGGCGGTTGCCATGTTGGTGAGTGA
AAAGTAACGCCTGTGTGTGCTTTCCATTTTTGTTTCTTGTTTTTTTCATT
TTAGTTGTGTTGGGCGGTCTTCTTCTGTCCTTCGCCAAATAATGCACAAA
GCAGTTTTTGGTAATATTGTTCAGTCTGGTGTGTTTTATGTTTTAAATTG
AGATTACTCCTCTTCGTACCGCTCTGCGGCCCATTCTCTGAGCCCGTCTC
TCTTACATCATTTTTTCATGCTTTCACACACGACCTTCGCAGATATCTCG
CAGATATGGTCAAGTTTTTTTAGTTCTTGGATGGCCAATGCGGTATAATC
ACAGCTGCTGTGCCGTAAGTAGAGTTCTAGTACTTCTACCCGTCCCAAAA
AGTGTTTTCGAAGTCGCCCAGCGCTACAACCCCGCGGCACAAAGCCTCAG
CGGTTTTGTACTCCAACTTGTTGCGGCGGTCGAAACCTAATAGGTAAACC
TTTTCTAGTCACCGTAGCAGCCTCAGATGAGTTTTAGCCTTCCAATTGTT
TGGACTTCCACTGGACACTGCACGACCCGTTTGTGAAGCAAACATTTGCG
CCTCGATTCTACAGCTTTTTTTCGTAAGCATATTGTACCCGCCTTTTGGA
ACAGCTTCGTCTACGTGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCACGTTCCGCTGGGGCGGGGTGGATGGGAAAGAAAAGCGAAAAAAGA
AGCAACCCCAACCAACACNNNNNNNNNNAAAAATTTTCCCCCCCTTCTTC
CTCTTTTTTTTTTTAAAAATTTTTTCCCCCCCCTTTTAAACACCCTTCTC
CTCCGCCCCCCCCCCCCCCCCCCCCCCCGCCTTTGCCAATGAGATGGTCG
AGTGGGCGGGATAGAAATGATCAGGACGACAGCAGTGTCGCCCACCCGCT
GTACAGCTCAGCTTCCTGCACACCCATCCGTGATGTTTCTTGCAGTCGTT
GCGCAATGCTGTATCCGTGATATCGCTCTGGACCCTGCGAAACGAGCCTA
GCTCACACAAGATGCCAAAAACAACTGGACCTATCTGCAGAACTCGATTA
CTCTATGGCATGAGCAGTGGCCTTGTCGAAACTTGCGCCGGCGTACCATC
TCATTCGATTTTTTTTTTTCCTTTTCTTGTTGGGGAAGTCGGGGTTTGAA
GTTCGCTCGAAGGTGCTGTACTATCCTGCTCAACCTGCGGTGCCCAACTA
TCGCGACAGGCCAGCAGTATCAGCACGAACAAAGAGAAGGCCTCGAAGGG
CAAAATGCGAACGTTTTCCGATGGCAGTAGTCCTCAGAGCGTACACCACG
TGTTCACGACTCTACGGCTACACAACGAACGCCTGTTCATGTTATCTACA
ATGACGAAGGCAATTTTCTTCCGTTCGGTGTTTTGTTGCAGCTTGCAATA
GCACCAGGGGTATCATGGCAACACAGCAGCCGTGCGCTACCTTGGGGACC
CTCGCTACCCCTCCTAGGCTCATTTTTTGCCCGCCCCCCCACCCCCTGTG
CTGTGCGAAACGCCTGGGATGTCTGTGGCTTTTGCGTGCGCTCTCCAGCT
GATGGTTCGAGGGTACAAGAGGGGCCTGGTGAAGTTCGCTCTCATCACCG
GCAAGAAGCCATGATTTTGTTTTGGTATTTTCGATCGTTACCTTGGTTTA
GTCAAGGCACAAGCAGCAATACGGCCATGCTGTAGAATTTCTTACATCGC
GAGAGCTGACGCCGGCGTGGGGGGCGTGCTGGTGCTAGTTTGTTGAGTTA
GCACCCAGTACGACAAGAAGGCCCTGCACCGTGTCGCGCTACCGTAGAAC
GCCTTTTTCGCCTGTAGTGGATTCTCATTATCAGCATGATTTTTGAACCA
AGCTTGCTGAAGTGTGGACGTTGACTGCGGTAATTCACTCCGAAGGCATC
GTACGACGCCCGCAGAGCGCACGGTACACCGACAGCCTTCCACGTGTGCC
TGCGGCTTAAGAATTCTGGAGGCCTCAAGTTGCTCTTTAGGCCCTCGGAT
AAGAGATGAGTGGACCCAGCTCTCTTCTGGCCGCCCGGGCGAGGACCTCG
CCGCCCCTTACCGCTTGCCGTTCACTACGGGAGTCCCCCCTGCTTGTTCA
CGCCCTTTCTCGGAGTGAATTTCTCGCGTGTAAATCACCCCGTGTAAGGG
TTACCCCGTAATTGGCCCGGGACGCACCGGCCGTTTTTTCAGCAACGAAC
GAGCAACGACCTTCCAGATTGCCACGCCAAAACAGTAGGCCAGCAGCGGG
TCAGGCCAGAGGGCTTCGTTCACCTTGCTGGAAGAACACGGCTCGGGGTA
GACTATCATGCCGCCGTTGGTCGCGTACGACACGGATGCACACCCGCAGG
GACCGTTTGTGCACAAACGTTCGGTTGGTCGTAGTCTGCAGGAGGAAGAA
CAGCAGTGGCGGTGTCGGATAGAGTGTAGTCGAGAGCTTTCCGAACACAT
GTGATTTGAATTTCACGTCTTTTCGCCGTGGAGTAAGAAGTGGAGCTTTG
AGGTTCGGTCCACGGGGTGTGGTATCTTGTGTTTCGGGCGGTAAACGCAG
AAGTAGCACAACTGCCGCGTAGATAGAACTCGCAGTTACAACAGGTTTTG
TTCGTTCAGCAGACAGAATAAGTTCCGAGCAGCGAGTGTTACGGTCTTGT
TTACAGGGCAGCGCCGGTGGCGGCCTTGCACGGGCGGAATTATCCCCAAA
TATTTTTCGCCGCGTCAGCAATCG back to topCoding sequence (CDS) from alignment at Ecto-sp13_S_contig1270:3883..17056- >mRNA_Ecto-sp13_S_contig1270.2235.1 ID=mRNA_Ecto-sp13_S_contig1270.2235.1|Name=mRNA_Ecto-sp13_S_contig1270.2235.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1191bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1270:3883..17056- (Ectocarpus species13 EcNAP12_S_4_19m) ATGAAGACGGCTGTACCGGTGCACGTGCTATGGGCGGGATTCTGCGCCTT GTGGCCCTGCCATGCATTTGTTCCGTCTAGCAGCCTGCCTTCGTTTGGGG TTCATTCGGGTATCGACGGCACAACAGCGTCGTCTTTTGACAGGAATGGA CACGGACACGATTGTGGATATGGCGCAGCCGGATCGGCGAGGGGTAAAGG CAGGAGGCGGGCGGCTCCGTCTAGGGCGAGGGCCCAGGGCGACGTTAGCA TGGGCCTGCGCGGCGCAGCTAAGAACACCTGGAAACGGGCGCGCGGTGGA GGGAATGGGGGCAAGACACGAAGCGACGGCGAGCTCAAGGAGGGCATAGC CAACTTCTATGACAAGTCTTCTGGTATCTGGGAAGAAATGTGGGGGGAGC ACATGCACCACGGCTACTACGTCCAGGGGGTGAAGCCCAAGAACATGGAG CACCATAGGGCAGCCCAGAGGTTCATGATCGGTCGTTCGCTTGAATGGGC AGGTGTAGAGGAGGGAGGGGCAGCCCCCAAAACGGGAGTCGACATTGGGT GCGGTGTGGGCGGTTCCTCTCGGGCCATCAGCAGGAGGTACGGCACCAGC ATGACGGGCATCTCTCTCTCTCCGGTGCAGGTGGAGAGAGCAAAAACCCT GTCTGAAGCGGCGGGTCTTGGAGACAAGTGCAAGTTCCAGGTGGCCGATG CCTTGAACACACCCTTCGACACCGACTCTTTCGACCTTGTTTGGAGCATG GAGAGCGGAGAGCACATGCCCTACAAGCCCAAGTTTGTTGGAGAATTGGC CCGCATCTGCGCCCCGGGGGGGCGTGTGCTCGTTGTAACGTGGTGTCACC GCGATCTGGAGGAGGGGGAGACCGAGCTCACCCCTAAGGAAGAGAAGCTT CTCGCAAAGATCAACAAGGCGTACTACCTGCCGCGATGGTGCTCCACCGC TGACTACGTCAAGTACTTCGAGGGCGAGGGGCTCGTCGACATCAAGAGAG CAGACTGGACGGACAACATCCAGAACTTCTGGCCGGCTGTCATTCGATCT TCGGTGTCTTTTCAAGGCATCGTGGGCTTGCTAAAGTCGGGGCCTGTTAC CATCCGTGGGGCGGTTGCCATGTTGCTGATGGTTCGAGGGTACAAGAGGG GCCTGGTGAAGTTCGCTCTCATCACCGGCAAGAAGCCATGA back to top
|