prot_Ecto-sp13_S_contig127.2232.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig127.2232.1
Unique Nameprot_Ecto-sp13_S_contig127.2232.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length1037
Homology
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BLAST of mRNA_Ecto-sp13_S_contig127.2232.1 vs. uniprot
Match: A0A6H5JT44_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JT44_9PHAE)

HSP 1 Score: 1623 bits (4203), Expect = 0.000e+0
Identity = 994/1035 (96.04%), Postives = 1015/1035 (98.07%), Query Frame = 0 
Query:    1 MKYYCALWLLSCFPLGSQLSTGPAATSRTRSDRRSPKTPTTTSGTVSSAGKTKRRTRSDDMDEVTAQRMQTLKRLLPGLEAGQLVSRAPALLGSTQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLYHEDTLAPRIEFIKRLFPESPRLLSRAPLLLTHDPETFLMPKIHQLESLLPGVDVLKVVRTEPTILYLDIGGLVKRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTVAAKFQQLQDLFPDANVVSMVESDATVLLYDYTSVGVKVECWRERVSNATELNQLIQDYPLLLSYSLDTSVSRLDFLIETTGVKPRPATMRTTVRMAKRDWLAVHGAKYSRKFLERKVEGPSVLRLWPGLYFDSDTGSVNGSGGRLLKGEGMSARLQDDGSVEVSSAAEMKEASAYIKSLERKYGKIIKETQLRFTPAVRRGKLGDNPSEVDMILYDIKSFDQQVRKLATGYRLKRFKELLPGLDTETLFTDYPNVLLMDLKKVEDKVEELRELLPGERVAGVVSVAPDLLLNDVQTCLRPRMTRLVAALTTVKQFQGXXXXXXXXXXXXXXXXXXXXXXXXXXVPSLQYILQSTSDHDELATRLFRDPSLLVVGVGPLARLQYTLEQHRNGSASIAMGNLGAYVGPEAALTASLHPTPWVGAGSGKAATGGTKSMRSPSKKDDASSDVHLGEDQSRLLPPVIVPQVLKCQMRDFITRNPEYVSFLAQRQGLDVSSISHSPEGDDQSVAFWERAVGRRLSEMFRPVDSPYAREMREARTNGKGPDGQKAPPLSELDMLIGDVLHFNDRMTVLASKIQKKMPQTVDVGEEAKKLAEDVKWGSRQIKRLLGLGSWTEQDVATPHSEVQVAEIPSPNANDASENVYDPVSTFPQGKRRGKKRQWVSDTFQSLMGSVGGSAAGGGDAIKVATAVEVSVKDGGNRETAQELERLLGEVSSNEGRLDNLLDLSSSIPDNTDDSSSPAKDGGGVSETTGTATDGSSAETQ 1035
            MKYYCAL LLSC PL SQLSTGPAATSRTR DRR+ K+P+TTSG VSSAGKTKRRTRSDDMDEVTAQRMQTLKRLLPGLEAGQLVSRAPALLGSTQ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLYHEDTLAPRIEF+KRLFPESPRLLSRAPLLLTHDPETFLMPKIHQLESLLPG+DVLKVVRTEPTILYLDIGGLVKRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTVAAKFQQLQDLFPDANVVSMVESDATVLLYDYTSVGVKV+CWRERVSNATELNQLIQDYPLLLSYSLDTSVSRLDFLIETTGVKPRPATMRTTVRMAKRDWLAVHG KY RKFLERKVEGPSVLRLWPGLYFDSDTGS NGSGGRLLKGEGMSA+LQDDGSVEVSSAAEMKEASAYIK+LERKYGKIIKETQLRFTPAVRRGKLGDNPSEVDMILYDIKSFDQQVRKLATGYRLKRFKELLPGLDTETLFT+YPNVLLMDLKKVEDKVEELRELLPGERVAGVVSVAPDLLLNDVQTCLRPRMTRLVAALTTVKQFQGXXXXXXXXXXXXXXXXXXXXXXXXXXVPSLQY+LQSTSDHDELATRLFRDPSLLVVGVGPLARLQYTLEQHRNGSASIA+GNLGAYVGPEAALTAS HPTPWVGAGSGKAATGGT S+R PS KDDASSDVHLGEDQSRLLPPVIVPQ+LKCQMRDFITRNPEYVSFLAQRQGLDVSS+SHSPEGDDQSVAFWERAVGRRLSEMFRPVDSPYAREMREAR NGKGPDGQKAPPLSELDMLIGDVLHFNDRMTVLASKIQKKMPQTVDVGEEAKKLAEDVKWGSRQIKRLLGLGSWTEQ+VATPHSEVQVAEIPS NANDAS+NV +P+STFPQGKRRGKKR+WVSDTFQSLMGSVGGSAAGG DAIKVATAVEVSVKDGGNRETAQELERLLGEVSSNEGRLDNLLDLSSSIPDNTDDSSSPA+DGGGVS TT TATDGSSAET+
Sbjct:    1 MKYYCALLLLSCVPLSSQLSTGPAATSRTR-DRRAQKSPSTTSGAVSSAGKTKRRTRSDDMDEVTAQRMQTLKRLLPGLEAGQLVSRAPALLGSTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLYHEDTLAPRIEFMKRLFPESPRLLSRAPLLLTHDPETFLMPKIHQLESLLPGIDVLKVVRTEPTILYLDIGGLVKRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTVAAKFQQLQDLFPDANVVSMVESDATVLLYDYTSVGVKVDCWRERVSNATELNQLIQDYPLLLSYSLDTSVSRLDFLIETTGVKPRPATMRTTVRMAKRDWLAVHGVKY-RKFLERKVEGPSVLRLWPGLYFDSDTGSGNGSGGRLLKGEGMSAKLQDDGSVEVSSAAEMKEASAYIKALERKYGKIIKETQLRFTPAVRRGKLGDNPSEVDMILYDIKSFDQQVRKLATGYRLKRFKELLPGLDTETLFTEYPNVLLMDLKKVEDKVEELRELLPGERVAGVVSVAPDLLLNDVQTCLRPRMTRLVAALTTVKQFQGXXXXXXXXXXXXXXXXXXXXXXXXXXVPSLQYMLQSTSDHDELATRLFRDPSLLVVGVGPLARLQYTLEQHRNGSASIALGNLGAYVGPEAALTASHHPTPWVGAGSGKAATGGTFSLRRPSTKDDASSDVHLGEDQSRLLPPVIVPQILKCQMRDFITRNPEYVSFLAQRQGLDVSSMSHSPEGDDQSVAFWERAVGRRLSEMFRPVDSPYAREMREARANGKGPDGQKAPPLSELDMLIGDVLHFNDRMTVLASKIQKKMPQTVDVGEEAKKLAEDVKWGSRQIKRLLGLGSWTEQNVATPHSEVQVAEIPSQNANDASKNVCNPMSTFPQGKRRGKKRRWVSDTFQSLMGSVGGSAAGGADAIKVATAVEVSVKDGGNRETAQELERLLGEVSSNEGRLDNLLDLSSSIPDNTDDSSSPAEDGGGVSGTTSTATDGSSAETR 1033
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig127.2232.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JT44_9PHAE0.000e+096.04Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 255..285
e-value: 2500.0
score: 0.7
coord: 325..356
e-value: 100.0
score: 11.5
coord: 82..113
e-value: 2900.0
score: 0.2
coord: 598..630
e-value: 280.0
score: 8.2
coord: 118..147
e-value: 130.0
score: 10.7
coord: 220..251
e-value: 370.0
score: 7.3
coord: 150..181
e-value: 1200.0
score: 3.3
coord: 519..549
e-value: 440.0
score: 6.7
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 83..351
e-value: 3.0E-12
score: 46.1
IPR038538MTERF superfamily, mitochondrial/chloroplasticGENE3D1.25.70.10coord: 146..283
e-value: 5.6E-12
score: 47.4
coord: 505..659
e-value: 8.9E-7
score: 30.3
NoneNo IPR availablePANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 55..197
coord: 548..651
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..1036
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.671

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig127contigEcto-sp13_S_contig127:22177..34991 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig127.2232.1mRNA_Ecto-sp13_S_contig127.2232.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig127 22063..35333 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig127.2232.1 ID=prot_Ecto-sp13_S_contig127.2232.1|Name=mRNA_Ecto-sp13_S_contig127.2232.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1037bp
MKYYCALWLLSCFPLGSQLSTGPAATSRTRSDRRSPKTPTTTSGTVSSAG
KTKRRTRSDDMDEVTAQRMQTLKRLLPGLEAGQLVSRAPALLGSTQLEEI
VPRRMAAMSSRLPGVDVLRLVRHSPALLLYHEDTLAPRIEFIKRLFPESP
RLLSRAPLLLTHDPETFLMPKIHQLESLLPGVDVLKVVRTEPTILYLDIG
GLVKRRLERLSELLPGHDVSVLVRKVPRLLTTNVSSLAQKMSSLRWLLGP
DADLHRIIHRRPALLVSKIETTVAAKFQQLQDLFPDANVVSMVESDATVL
LYDYTSVGVKVECWRERVSNATELNQLIQDYPLLLSYSLDTSVSRLDFLI
ETTGVKPRPATMRTTVRMAKRDWLAVHGAKYSRKFLERKVEGPSVLRLWP
GLYFDSDTGSVNGSGGRLLKGEGMSARLQDDGSVEVSSAAEMKEASAYIK
SLERKYGKIIKETQLRFTPAVRRGKLGDNPSEVDMILYDIKSFDQQVRKL
ATGYRLKRFKELLPGLDTETLFTDYPNVLLMDLKKVEDKVEELRELLPGE
RVAGVVSVAPDLLLNDVQTCLRPRMTRLVAALTTVKQFQGVLDADKVRAM
VVTCPQLLLSDVRNVVVPSLQYILQSTSDHDELATRLFRDPSLLVVGVGP
LARLQYTLEQHRNGSASIAMGNLGAYVGPEAALTASLHPTPWVGAGSGKA
ATGGTKSMRSPSKKDDASSDVHLGEDQSRLLPPVIVPQVLKCQMRDFITR
NPEYVSFLAQRQGLDVSSISHSPEGDDQSVAFWERAVGRRLSEMFRPVDS
PYAREMREARTNGKGPDGQKAPPLSELDMLIGDVLHFNDRMTVLASKIQK
KMPQTVDVGEEAKKLAEDVKWGSRQIKRLLGLGSWTEQDVATPHSEVQVA
EIPSPNANDASENVYDPVSTFPQGKRRGKKRQWVSDTFQSLMGSVGGSAA
GGGDAIKVATAVEVSVKDGGNRETAQELERLLGEVSSNEGRLDNLLDLSS
SIPDNTDDSSSPAKDGGGVSETTGTATDGSSAETQQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003690MTERF
IPR038538MTERF_sf