mRNA_Ecto-sp13_S_contig127.2232.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig127.2232.1 vs. uniprot
Match: A0A6H5JT44_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JT44_9PHAE) HSP 1 Score: 1624 bits (4205), Expect = 0.000e+0 Identity = 994/1035 (96.04%), Postives = 1015/1035 (98.07%), Query Frame = 1
Query: 115 MKYYCALWLLSCFPLGSQLSTGPAATSRTRSDRRSPKTPTTTSGTVSSAGKTKRRTRSDDMDEVTAQRMQTLKRLLPGLEAGQLVSRAPALLGSTQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLYHEDTLAPRIEFIKRLFPESPRLLSRAPLLLTHDPETFLMPKIHQLESLLPGVDVLKVVRTEPTILYLDIGGLVKRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTVAAKFQQLQDLFPDANVVSMVESDATVLLYDYTSVGVKVECWRERVSNATELNQLIQDYPLLLSYSLDTSVSRLDFLIETTGVKPRPATMRTTVRMAKRDWLAVHGAKYSRKFLERKVEGPSVLRLWPGLYFDSDTGSVNGSGGRLLKGEGMSARLQDDGSVEVSSAAEMKEASAYIKSLERKYGKIIKETQLRFTPAVRRGKLGDNPSEVDMILYDIKSFDQQVRKLATGYRLKRFKELLPGLDTETLFTDYPNVLLMDLKKVEDKVEELRELLPGERVAGVVSVAPDLLLNDVQTCLRPRMTRLVAALTTVKQFQGXXXXXXXXXXXXXXXXXXXXXXXXXXVPSLQYILQSTSDHDELATRLFRDPSLLVVGVGPLARLQYTLEQHRNGSASIAMGNLGAYVGPEAALTASLHPTPWVGAGSGKAATGGTKSMRSPSKKDDASSDVHLGEDQSRLLPPVIVPQVLKCQMRDFITRNPEYVSFLAQRQGLDVSSISHSPEGDDQSVAFWERAVGRRLSEMFRPVDSPYAREMREARTNGKGPDGQKAPPLSELDMLIGDVLHFNDRMTVLASKIQKKMPQTVDVGEEAKKLAEDVKWGSRQIKRLLGLGSWTEQDVATPHSEVQVAEIPSPNANDASENVYDPVSTFPQGKRRGKKRQWVSDTFQSLMGSVGGSAAGGGDAIKVATAVEVSVKDGGNRETAQELERLLGEVSSNEGRLDNLLDLSSSIPDNTDDSSSPAKDGGGVSETTGTATDGSSAETQ 3219
MKYYCAL LLSC PL SQLSTGPAATSRTR DRR+ K+P+TTSG VSSAGKTKRRTRSDDMDEVTAQRMQTLKRLLPGLEAGQLVSRAPALLGSTQ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLYHEDTLAPRIEF+KRLFPESPRLLSRAPLLLTHDPETFLMPKIHQLESLLPG+DVLKVVRTEPTILYLDIGGLVKRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTVAAKFQQLQDLFPDANVVSMVESDATVLLYDYTSVGVKV+CWRERVSNATELNQLIQDYPLLLSYSLDTSVSRLDFLIETTGVKPRPATMRTTVRMAKRDWLAVHG KY RKFLERKVEGPSVLRLWPGLYFDSDTGS NGSGGRLLKGEGMSA+LQDDGSVEVSSAAEMKEASAYIK+LERKYGKIIKETQLRFTPAVRRGKLGDNPSEVDMILYDIKSFDQQVRKLATGYRLKRFKELLPGLDTETLFT+YPNVLLMDLKKVEDKVEELRELLPGERVAGVVSVAPDLLLNDVQTCLRPRMTRLVAALTTVKQFQGXXXXXXXXXXXXXXXXXXXXXXXXXXVPSLQY+LQSTSDHDELATRLFRDPSLLVVGVGPLARLQYTLEQHRNGSASIA+GNLGAYVGPEAALTAS HPTPWVGAGSGKAATGGT S+R PS KDDASSDVHLGEDQSRLLPPVIVPQ+LKCQMRDFITRNPEYVSFLAQRQGLDVSS+SHSPEGDDQSVAFWERAVGRRLSEMFRPVDSPYAREMREAR NGKGPDGQKAPPLSELDMLIGDVLHFNDRMTVLASKIQKKMPQTVDVGEEAKKLAEDVKWGSRQIKRLLGLGSWTEQ+VATPHSEVQVAEIPS NANDAS+NV +P+STFPQGKRRGKKR+WVSDTFQSLMGSVGGSAAGG DAIKVATAVEVSVKDGGNRETAQELERLLGEVSSNEGRLDNLLDLSSSIPDNTDDSSSPA+DGGGVS TT TATDGSSAET+
Sbjct: 1 MKYYCALLLLSCVPLSSQLSTGPAATSRTR-DRRAQKSPSTTSGAVSSAGKTKRRTRSDDMDEVTAQRMQTLKRLLPGLEAGQLVSRAPALLGSTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLYHEDTLAPRIEFMKRLFPESPRLLSRAPLLLTHDPETFLMPKIHQLESLLPGIDVLKVVRTEPTILYLDIGGLVKRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTVAAKFQQLQDLFPDANVVSMVESDATVLLYDYTSVGVKVDCWRERVSNATELNQLIQDYPLLLSYSLDTSVSRLDFLIETTGVKPRPATMRTTVRMAKRDWLAVHGVKY-RKFLERKVEGPSVLRLWPGLYFDSDTGSGNGSGGRLLKGEGMSAKLQDDGSVEVSSAAEMKEASAYIKALERKYGKIIKETQLRFTPAVRRGKLGDNPSEVDMILYDIKSFDQQVRKLATGYRLKRFKELLPGLDTETLFTEYPNVLLMDLKKVEDKVEELRELLPGERVAGVVSVAPDLLLNDVQTCLRPRMTRLVAALTTVKQFQGXXXXXXXXXXXXXXXXXXXXXXXXXXVPSLQYMLQSTSDHDELATRLFRDPSLLVVGVGPLARLQYTLEQHRNGSASIALGNLGAYVGPEAALTASHHPTPWVGAGSGKAATGGTFSLRRPSTKDDASSDVHLGEDQSRLLPPVIVPQILKCQMRDFITRNPEYVSFLAQRQGLDVSSMSHSPEGDDQSVAFWERAVGRRLSEMFRPVDSPYAREMREARANGKGPDGQKAPPLSELDMLIGDVLHFNDRMTVLASKIQKKMPQTVDVGEEAKKLAEDVKWGSRQIKRLLGLGSWTEQNVATPHSEVQVAEIPSQNANDASKNVCNPMSTFPQGKRRGKKRRWVSDTFQSLMGSVGGSAAGGADAIKVATAVEVSVKDGGNRETAQELERLLGEVSSNEGRLDNLLDLSSSIPDNTDDSSSPAEDGGGVSGTTSTATDGSSAETR 1033 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig127.2232.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig127.2232.1 >prot_Ecto-sp13_S_contig127.2232.1 ID=prot_Ecto-sp13_S_contig127.2232.1|Name=mRNA_Ecto-sp13_S_contig127.2232.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1037bp MKYYCALWLLSCFPLGSQLSTGPAATSRTRSDRRSPKTPTTTSGTVSSAGback to top mRNA from alignment at Ecto-sp13_S_contig127:22063..35333+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig127.2232.1 ID=mRNA_Ecto-sp13_S_contig127.2232.1|Name=mRNA_Ecto-sp13_S_contig127.2232.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=13271bp|location=Sequence derived from alignment at Ecto-sp13_S_contig127:22063..35333+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig127:22063..35333+ >mRNA_Ecto-sp13_S_contig127.2232.1 ID=mRNA_Ecto-sp13_S_contig127.2232.1|Name=mRNA_Ecto-sp13_S_contig127.2232.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=3111bp|location=Sequence derived from alignment at Ecto-sp13_S_contig127:22063..35333+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |