mRNA_Ecto-sp13_S_contig127.2231.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig127.2231.1
Unique NamemRNA_Ecto-sp13_S_contig127.2231.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig127.2231.1 vs. uniprot
Match: D7FSC9_ECTSI (Putative transcriptional regulator n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSC9_ECTSI)

HSP 1 Score: 836 bits (2160), Expect = 2.210e-301
Identity = 429/457 (93.87%), Postives = 434/457 (94.97%), Query Frame = 1 
Query:    1 MGVVEKAVYRAVLRKARLFDKNIAAKALIQRHGIVRPPLTDSDAIGGDRRLYAAALEVVVGSHCHVRPERLAWSLQRLIRTIRMADHNNLEVVADRAAENEAKEAEGVPLEDRTVWEQDAMVAISLEIFFPGALKGVDGADKVGAGFAAIRELSSKWALAESLGLTEDLENNGQTPCVKRRRRKGKVAGPRNTTTKRALRVLRHQERRARAAGERNTRSLSPSPLSAGRGFELDTRNNLPRPEVVIEPTGTPAKGVYLISHPLSFLYAPEETFHRSVVLLVDHSPLGSYGLVVNKDKGETLEEALCEDALPLASDALQQVLKNPVRVGGPVMSRLAWLHPHKDVGGVPLAEGAEKPVFFCGKMEKAAELLTKGTAKPADFSLVVGASAWDAGQLQGELNHGLWIMAKAPASFALAGGEDMWRDMLEAMGGPYAAMARVPHGRQWARAGVKISPSDWP 1371
            MG+VEKAVYRAVLRKARLFDKNIAAKALIQRHGIVRPPLT+SDAIGGDRRLYAAALEVVVGSHCHVRPERLAWSLQRLIRTIRMAD NNLEVVADRAAENEAKEAEGVPLEDRTVWEQDAMVAISLEIFFPGALKGVDGADKVGAGFAAIRELSSKWALAESLGLTE LENNGQT CVKRRRRKGKVAGPRNTTTKRALRVLRHQER          RS SP  LS GRGFELDTRN+L RP  V+EPTGTPAKGVYLISHPLSFLYAPEE FHRSVVLLVDHSPLGSYGLVVNKDKGETLEEALCEDALPLASDALQQVLKNPVRVGGPVMSRLAWLHPHK+VGGVPLAEGAEKPVFFCGKMEKAAELLTKG AKPADFSLVVGASAWDAGQLQGELNHGLWIMAKAPASFALAGGEDMWRDMLEAMGGPYAAMARVPHGRQWAR GVKISPSDWP
Sbjct:    1 MGLVEKAVYRAVLRKARLFDKNIAAKALIQRHGIVRPPLTESDAIGGDRRLYAAALEVVVGSHCHVRPERLAWSLQRLIRTIRMADQNNLEVVADRAAENEAKEAEGVPLEDRTVWEQDAMVAISLEIFFPGALKGVDGADKVGAGFAAIRELSSKWALAESLGLTEYLENNGQTSCVKRRRRKGKVAGPRNTTTKRALRVLRHQERXXXXXXXXXXRSTSP--LSPGRGFELDTRNSLARPGDVVEPTGTPAKGVYLISHPLSFLYAPEEMFHRSVVLLVDHSPLGSYGLVVNKDKGETLEEALCEDALPLASDALQQVLKNPVRVGGPVMSRLAWLHPHKEVGGVPLAEGAEKPVFFCGKMEKAAELLTKGAAKPADFSLVVGASAWDAGQLQGELNHGLWIMAKAPASFALAGGEDMWRDMLEAMGGPYAAMARVPHGRQWARTGVKISPSDWP 455
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BLAST of mRNA_Ecto-sp13_S_contig127.2231.1 vs. uniprot
Match: A0A7Y5WA64_9BACT (UPF0301 protein HUU10_02990 n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A7Y5WA64_9BACT)

HSP 1 Score: 102 bits (255), Expect = 1.810e-21
Identity = 69/193 (35.75%), Postives = 101/193 (52.33%), Query Frame = 1 
Query:  751 TPAKGVYLISHPLSFLYAPEETFHRSVVLLVDHSPLGSYGLVVNKDKGETLEEALCEDALPLASDALQQVLKNPVRVGGPVM-SRLAWLHPHKDV--GGVPLAEGAEKPVFFCGKMEKAAELLTKGTAKPADFSLVVGASAWDAGQLQGELNHGLWIMAKAPASFALAGGED-MWRDMLEAMGGPYAAMARVP 1317
            TPAKG  L+S P+      +  F R+VVLL +HSP GS+GL++NK    TL+E +   +LP          + P+ +GGPV    L  LH   +   G V +  G    V++ G  E+  ++LT G A  AD    +G S W  GQLQ E+N G W++A     ++     D +WR +L  MGG Y+ ++  P
Sbjct:   10 TPAKGKLLLSEPM----LQDPNFRRTVVLLCEHSPDGSFGLIINKPIPITLDEVMPGQSLP----------EIPLFLGGPVQPDTLHILHKLGEAIAGSVEVTPG----VWWGGDFEEIRQMLTLGVADGADCRFFIGYSGWAEGQLQDEMNQGGWLVADNRPGYSFTEDPDHLWRQILRDMGGDYSILSNFP 184
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BLAST of mRNA_Ecto-sp13_S_contig127.2231.1 vs. uniprot
Match: A0A1G9KFE3_9BACT (UPF0301 protein SAMN04488090_0995 n=1 Tax=Siphonobacter aquaeclarae TaxID=563176 RepID=A0A1G9KFE3_9BACT)

HSP 1 Score: 96.3 bits (238), Expect = 3.870e-19
Identity = 62/190 (32.63%), Postives = 98/190 (51.58%), Query Frame = 1 
Query:  760 KGVYLISHPLSFLYAPEETFHRSVVLLVDHSPLGSYGLVVNKDKGETLEEALCEDALPLASDALQQVLKNPVRVGGPV-MSRLAWLHPHKDV--GGVPLAEGAEKPVFFCGKMEKAAELLTKGTAKPADFSLVVGASAWDAGQLQGELNHGLWIMAKAPAS-FALAGGEDMWRDMLEAMGGPYAAMARVP 1317
            KG  L++ P    +  +E F RSVVL+ +H+P GS+GLV+ +     L++ + +D  P            P+ VGGPV  + L ++H   D+  G V L E     +F+ G  ++  +LL  GT   AD    +G S W AGQL GE+    WI++++ +  F     + +WR +L  MGG Y  ++  P
Sbjct:   18 KGSVLLAEP----FLGDENFERSVVLMCEHNPQGSFGLVLTQTTELLLDDVIDDDIYPDV----------PLFVGGPVEKNTLHFIHRRPDIIEGSVELGER----LFWSGNFQQIKQLLNLGTLPVADIRFFIGYSGWSAGQLDGEIARDSWIVSQSDSDLFFDCATDQLWRTILRNMGGAYRVLSHYP 189
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BLAST of mRNA_Ecto-sp13_S_contig127.2231.1 vs. uniprot
Match: A0A2T0TIC1_9BACT (UPF0301 protein CLV58_102151 n=1 Tax=Spirosoma oryzae TaxID=1469603 RepID=A0A2T0TIC1_9BACT)

HSP 1 Score: 94.0 bits (232), Expect = 1.970e-18
Identity = 63/194 (32.47%), Postives = 96/194 (49.48%), Query Frame = 1 
Query:  751 TPAKGVYLISHPLSFLYAPEETFHRSVVLLVDHSPLGSYGLVVNKDKGETLEEALCEDALPLASDALQQVLKN-PVRVGGPVMSR-LAWLHPHKDV--GGVPLAEGAEKPVFFCGKMEKAAELLTKGTAKPADFSLVVGASAWDAGQLQGELNHGLWIMAKAPASFAL-AGGEDMWRDMLEAMGGPYAAMARVP 1317
            T + G  L++ P    +  +  F RSVVL+ ++SP G++GL++N+     L            SD L+ V  + P+ VGGPV    L ++H   D+  G + + EG    +++ G  E+  + +  GT    D    +G S WD GQL  E+ H  WI+ +A A F       D WRD+L  MGG Y  +A  P
Sbjct:    7 TVSTGSLLVAEP----FLGDGNFDRSVVLICEYSPAGTFGLIMNQATDLQL------------SDVLEDVYADLPLFVGGPVQQNTLHFIHRRPDLIEGSILVDEG----LYWSGDFEQVKQAVNMGTLTEQDIRFFLGYSGWDGGQLTSEIRHKSWIVTRADAEFLFETPAPDFWRDVLNRMGGMYRTIAHYP 180
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BLAST of mRNA_Ecto-sp13_S_contig127.2231.1 vs. uniprot
Match: A0A7L5DI50_9BACT (UPF0301 protein HH216_04180 n=1 Tax=Spirosoma sp. CJU-R4 TaxID=2728024 RepID=A0A7L5DI50_9BACT)

HSP 1 Score: 91.3 bits (225), Expect = 1.700e-17
Identity = 62/190 (32.63%), Postives = 94/190 (49.47%), Query Frame = 1 
Query:  763 GVYLISHPLSFLYAPEETFHRSVVLLVDHSPLGSYGLVVNKDKGETLEEALCEDALPLASDALQQVLKN-PVRVGGPVMSR-LAWLHPHKDV--GGVPLAEGAEKPVFFCGKMEKAAELLTKGTAKPADFSLVVGASAWDAGQLQGELNHGLWIMAKAPASFALAGGE-DMWRDMLEAMGGPYAAMARVP 1317
            G  L++ P    +  +  F RSVVL+ ++SP GS+GL++N+     L            SD L  V  + P+ VGGPV    L ++H   D+  G + + +G    +++ G  E+  + +  GT    D    +G S WD GQL  E+ H  WI+ +A A F       D WRD+L+ MGG Y  +A  P
Sbjct:   11 GSLLVAEP----FLGDGNFDRSVVLICEYSPAGSFGLIMNQATDLQL------------SDVLDDVYADLPLFVGGPVQQNTLHFIHRRPDLIDGAIQVDQG----LYWSGDFEQVKQAVNMGTLTEKDIRFFLGYSGWDGGQLANEIKHKSWIVTRANADFLFDTPVIDFWRDVLKRMGGMYQTIAHYP 180
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BLAST of mRNA_Ecto-sp13_S_contig127.2231.1 vs. uniprot
Match: A0A6G9AXQ8_9BACT (UPF0301 protein G8759_33460 n=4 Tax=Spirosoma TaxID=107 RepID=A0A6G9AXQ8_9BACT)

HSP 1 Score: 90.1 bits (222), Expect = 4.280e-17
Identity = 61/189 (32.28%), Postives = 96/189 (50.79%), Query Frame = 1 
Query:  763 GVYLISHPLSFLYAPEETFHRSVVLLVDHSPLGSYGLVVNKDKGETLEEALCEDALPLASDALQQVLKNPVRVGGPVMSR-LAWLHPHKDV--GGVPLAEGAEKPVFFCGKMEKAAELLTKGTAKPADFSLVVGASAWDAGQLQGELNHGLWIMAKAPASFALAGGEDM-WRDMLEAMGGPYAAMARVP 1317
            G  LI+ P    +  +  F RSVVL+ +HSP G++GLV+N+     L + + +D     S          + +GGPV    L ++H   D+  G + +  G    +++ G  E+  + +  GT    D    VG S WDAGQL GEL+   WI+++A A+F      D  WR +L+ MGG + ++A  P
Sbjct:   11 GSLLIAEP----FMGDTNFDRSVVLVCEHSPAGTFGLVLNQTTDLQLGDVI-DDVYTTQS----------LFIGGPVQQNTLHFIHRRPDLIDGSIRVTSG----LYWSGDFEQVKQAINVGTLTERDIRFFVGYSGWDAGQLAGELDQKAWIVSRADATFLFETPADQFWRGVLKRMGGEFKSIAHYP 180
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BLAST of mRNA_Ecto-sp13_S_contig127.2231.1 vs. uniprot
Match: G8TCS0_NIAKG (UPF0301 protein Niako_7310 n=7 Tax=Niastella TaxID=354354 RepID=G8TCS0_NIAKG)

HSP 1 Score: 88.2 bits (217), Expect = 1.850e-16
Identity = 64/192 (33.33%), Postives = 94/192 (48.96%), Query Frame = 1 
Query:  754 PAKGVYLISHPLSFLYAPEETFHRSVVLLVDHSPLGSYGLVVNKDKGETLEEALCEDALPLASDALQQVLKNPVRVGGPV-MSRLAWLHPHKDV--GGVPLAEGAEKPVFFCGKMEKAAELLTKGTAKPADFSLVVGASAWDAGQLQGELNHGLWIMAKAPASFAL-AGGEDMWRDMLEAMGGPYAAMARVP 1317
            P  G+ LI+ P  FL  P   F R+VV L DH   GS+G V+N+  G TL E        L +D  +  LK PV  GGPV M  + +LH + D+  G   + +G    +++ G  E A  L+  G+         +G S W +GQL  EL    W+ A+A          +++W++ L+ +GG Y  MA  P
Sbjct:    4 PGPGILLIAEP--FLKDPN--FSRTVVFLCDHQDEGSFGFVINRVFGHTLNE--------LMNDLDE--LKLPVFYGGPVQMDTIHFLHQYPDLIPGSYEVLDG----IYWGGDFETAITLIKAGSIDTTKIRFFIGYSGWGSGQLNDELKEKSWLTAQATRKLVFHRKADEIWKESLKHLGGDYEMMANFP 177
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BLAST of mRNA_Ecto-sp13_S_contig127.2231.1 vs. uniprot
Match: A0A4V1UQ20_9BACT (UPF0301 protein EOO01_34085 n=1 Tax=Chitinophagaceae bacterium TaxID=1869212 RepID=A0A4V1UQ20_9BACT)

HSP 1 Score: 88.2 bits (217), Expect = 1.850e-16
Identity = 63/192 (32.81%), Postives = 92/192 (47.92%), Query Frame = 1 
Query:  754 PAKGVYLISHPLSFLYAPEETFHRSVVLLVDHSPLGSYGLVVNKDKGETLEEALCEDALPLASDALQQVLKNPVRVGGPV-MSRLAWLH--PHKDVGGVPLAEGAEKPVFFCGKMEKAAELLTKGTAKPADFSLVVGASAWDAGQLQGELNHGLWIMAKAPASFALAGGED-MWRDMLEAMGGPYAAMARVP 1317
            PA G  LI+ P  FL  P   F R+VV + DH   GS+G V+N+  G TL+E + +             +K PV  GGPV M  + +LH  P +  G   +  G    +++ G  E A +LL KG    A     +G S W  GQL  ELN   W+  +A          D +W++ ++++GG Y+ M   P
Sbjct:    4 PAPGTLLIAEP--FLKDPN--FSRTVVFICDHHEQGSFGFVLNRSYGHTLDELMND----------MGDMKIPVFYGGPVQMDTIHFLHQYPEEIAGSYEIMNG----IYWGGDFELAIDLLRKGQIDLARIRFFIGYSGWSEGQLSEELNQKSWLTLEANRKLVFFKDVDELWKEAVKSLGGDYSMMINFP 177
[Close]
BLAST of mRNA_Ecto-sp13_S_contig127.2231.1 vs. uniprot
Match: A0A3D8HGL4_9BACT (UPF0301 protein DWU89_06010 n=3 Tax=Parabacteroides TaxID=375288 RepID=A0A3D8HGL4_9BACT)

HSP 1 Score: 88.6 bits (218), Expect = 1.950e-16
Identity = 63/190 (33.16%), Postives = 94/190 (49.47%), Query Frame = 1 
Query:  754 PAKGVYLISHPLSFLYAPEETFHRSVVLLVDHSPLGSYGLVVNKDKGETLEEALCEDALPLASDALQQVLKNPVRVGGPVMS-RLAWLHPHKDVGGVPLAEGAEKPVFFCGKMEKAAELLTKGTAKPADFSLVVGASAWDAGQLQGELNHGLWIMAKAP-ASFALAGGEDMWRDMLEAMGGPYAAMARVP 1317
            PA+G  LIS P    +  +  F RSVVLLV+H+P GS GLV+NK K E L     ED        L++    P+ +GGPV + RL ++H   D+  +P +    + ++F G        +  G          +G S W  GQL  E++   W+++ A   +  LA GED W+  LE++G  Y    + P
Sbjct:   17 PAQGSILISEP----FLQDAYFQRSVVLLVEHAPEGSMGLVLNK-KTELLVNTFFED--------LKKYPDMPIYLGGPVSANRLFFIHSLGDMI-IPNSVKINEHLYFDGDFNALLRYIQNGHPIDGKVKFFLGYSGWQEGQLTNEISKNSWVVSHASNRNVLLAEGEDFWKRSLESLGSQYETWTKYP 192
[Close]
BLAST of mRNA_Ecto-sp13_S_contig127.2231.1 vs. uniprot
Match: A0A4Q2USZ5_9BACT (UPF0301 protein EQG79_06825 n=2 Tax=Cytophagaceae TaxID=89373 RepID=A0A4Q2USZ5_9BACT)

HSP 1 Score: 87.4 bits (215), Expect = 3.350e-16
Identity = 58/191 (30.37%), Postives = 94/191 (49.21%), Query Frame = 1 
Query:  757 AKGVYLISHPLSFLYAPEETFHRSVVLLVDHSPLGSYGLVVNKDKGETLEEALCEDALPLASDALQQVLKNPVRVGGPVM-SRLAWLHPHKDV--GGVPLAEGAEKPVFFCGKMEKAAELLTKGTAKPADFSLVVGASAWDAGQLQGELNHGLWIMAKAPASFAL-AGGEDMWRDMLEAMGGPYAAMARVP 1317
            A G  LI+ P    +  +  F RSVVL+ +HSP G++GLV+N+     L + + + ++ L           P+ VGGPV  + L ++H   D+    + +  G    +++ G  E+  + +  GT    D    +G S W  GQL  ELN   WI+++  A F       + WR +L+ MGG Y ++A  P
Sbjct:    5 ANGNLLIAEP----FMGDTNFERSVVLVCEHSPAGTFGLVLNQPTDIHLSDVIEDISVDL-----------PLFVGGPVQHNTLHFIHRRPDLIENSIRVLSG----LYWSGDFEQVKQAVNLGTLTDRDARFFIGYSGWSEGQLDAELNQKAWIVSRTDADFLFDTPASEFWRGVLKRMGGEYKSIAHYP 176
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig127.2231.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSC9_ECTSI2.210e-30193.87Putative transcriptional regulator n=2 Tax=Ectocar... [more]
A0A7Y5WA64_9BACT1.810e-2135.75UPF0301 protein HUU10_02990 n=1 Tax=Bacteroidetes ... [more]
A0A1G9KFE3_9BACT3.870e-1932.63UPF0301 protein SAMN04488090_0995 n=1 Tax=Siphonob... [more]
A0A2T0TIC1_9BACT1.970e-1832.47UPF0301 protein CLV58_102151 n=1 Tax=Spirosoma ory... [more]
A0A7L5DI50_9BACT1.700e-1732.63UPF0301 protein HH216_04180 n=1 Tax=Spirosoma sp. ... [more]
A0A6G9AXQ8_9BACT4.280e-1732.28UPF0301 protein G8759_33460 n=4 Tax=Spirosoma TaxI... [more]
G8TCS0_NIAKG1.850e-1633.33UPF0301 protein Niako_7310 n=7 Tax=Niastella TaxID... [more]
A0A4V1UQ20_9BACT1.850e-1632.81UPF0301 protein EOO01_34085 n=1 Tax=Chitinophagace... [more]
A0A3D8HGL4_9BACT1.950e-1633.16UPF0301 protein DWU89_06010 n=3 Tax=Parabacteroide... [more]
A0A4Q2USZ5_9BACT3.350e-1630.37UPF0301 protein EQG79_06825 n=2 Tax=Cytophagaceae ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig127contigEcto-sp13_S_contig127:15821..21888 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score845.9
Seed ortholog evalue8.9e-243
Seed eggNOG ortholog2880.D7FSC9
Model size2021
Hectar predicted targeting categorymitochondrion
Exons8
EggNOG free text desc.Uncharacterized ACR, COG1678
EggNOG OGs2QV60@2759,COG1678@1
Ec32 ortholog descriptionProtein of unknown function UPF0301
Ec32 orthologEc-20_005040.1
Cds size1374
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig127.2231.1prot_Ecto-sp13_S_contig127.2231.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig127 16468..21888 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462678.1247756-UTR-Ecto-sp13_S_contig127:15820..164671681462678.1247756-UTR-Ecto-sp13_S_contig127:15820..16467Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig127 15821..16467 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462678.1367345-CDS-Ecto-sp13_S_contig127:16467..166201681462678.1367345-CDS-Ecto-sp13_S_contig127:16467..16620Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig127 16468..16620 -
1681462678.1466713-CDS-Ecto-sp13_S_contig127:17347..173981681462678.1466713-CDS-Ecto-sp13_S_contig127:17347..17398Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig127 17348..17398 -
1681462678.1601362-CDS-Ecto-sp13_S_contig127:17974..180761681462678.1601362-CDS-Ecto-sp13_S_contig127:17974..18076Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig127 17975..18076 -
1681462678.1754153-CDS-Ecto-sp13_S_contig127:18598..190871681462678.1754153-CDS-Ecto-sp13_S_contig127:18598..19087Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig127 18599..19087 -
1681462678.1849325-CDS-Ecto-sp13_S_contig127:19293..194361681462678.1849325-CDS-Ecto-sp13_S_contig127:19293..19436Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig127 19294..19436 -
1681462678.1946297-CDS-Ecto-sp13_S_contig127:19768..200041681462678.1946297-CDS-Ecto-sp13_S_contig127:19768..20004Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig127 19769..20004 -
1681462678.2042744-CDS-Ecto-sp13_S_contig127:20194..203161681462678.2042744-CDS-Ecto-sp13_S_contig127:20194..20316Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig127 20195..20316 -
1681462678.2139497-CDS-Ecto-sp13_S_contig127:21810..218881681462678.2139497-CDS-Ecto-sp13_S_contig127:21810..21888Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig127 21811..21888 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig127.2231.1

>prot_Ecto-sp13_S_contig127.2231.1 ID=prot_Ecto-sp13_S_contig127.2231.1|Name=mRNA_Ecto-sp13_S_contig127.2231.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=458bp
MGVVEKAVYRAVLRKARLFDKNIAAKALIQRHGIVRPPLTDSDAIGGDRR
LYAAALEVVVGSHCHVRPERLAWSLQRLIRTIRMADHNNLEVVADRAAEN
EAKEAEGVPLEDRTVWEQDAMVAISLEIFFPGALKGVDGADKVGAGFAAI
RELSSKWALAESLGLTEDLENNGQTPCVKRRRRKGKVAGPRNTTTKRALR
VLRHQERRARAAGERNTRSLSPSPLSAGRGFELDTRNNLPRPEVVIEPTG
TPAKGVYLISHPLSFLYAPEETFHRSVVLLVDHSPLGSYGLVVNKDKGET
LEEALCEDALPLASDALQQVLKNPVRVGGPVMSRLAWLHPHKDVGGVPLA
EGAEKPVFFCGKMEKAAELLTKGTAKPADFSLVVGASAWDAGQLQGELNH
GLWIMAKAPASFALAGGEDMWRDMLEAMGGPYAAMARVPHGRQWARAGVK
ISPSDWP*
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mRNA from alignment at Ecto-sp13_S_contig127:15821..21888-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig127.2231.1 ID=mRNA_Ecto-sp13_S_contig127.2231.1|Name=mRNA_Ecto-sp13_S_contig127.2231.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6068bp|location=Sequence derived from alignment at Ecto-sp13_S_contig127:15821..21888- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGGTGTCGTGGAAAAGGCGGTTTACCGCGCAGTGTTGCGTAAAGCGCG
GCTGTTCGACAAGAACATAGCAGCCAAGGTGAGCAAAGCTAGCAGAGGAA
GACTACTGCTTTACGTGGTTTCTAACCTAAGTTTACAACCTCTAAAAGCT
GCTGTTTTGCATGCAATCTCCACACACCACGCCGGATGCTTTGCGCCTCT
AACCTGTTTAAAGGAAGCATGTCGGTCATTGCTCATCTATTTTTGATTAC
GGGTGCGTCTCCATAACGTGCATCATTTGGATATTATATATGCAGCAGAA
GAGCAGTGCTCATTTTGCTAGGTTCAGTGTAAGGAGTTTAGATTGCGCCG
CCTTGTTTTTTTGCACTGGGTATCGATCTCGCGAACGCTGTAGGCCACCG
TTTGGGGTGGCGAAATCAGGGACGAGTAGCTGTGGTCAGCTATCGTTTGG
TGTGAAGAACGTGTGGGTGCTGGCTGCGTGCGACTGCTTTCGTCGGAAAG
TGTAGTTTTGTTGAGATGGGATGAGGCGCAAAGAGAGAACCAGACGTTCC
TCTGCAGCGGGGATACCTCCTACGCAGCCCCCCCCCCACAGTCACGCAGG
CCTTGCACAACGCGTGCCTGTACGTACACCGCAGTGGTATTAGAGGTGGT
TTCAGGTCGCCTTTTGTCGATGCGGGTGTGTTGGAACGCTCCGATGGCCG
ACCAGCCCAGAGCTTCAACCGGTCCAACAAAATCGTGAAACCTGTGCACT
TGACGGCGTGGTCGTGCTGGGGAATTCCCCTTTGACTGAAAACTGCGGGT
GATACGATAGGCGAAGGTTGTGGGCTTTCTATTGTACCCGCCATAACTCT
GGATGGAGATGGAGAACTCAGAGATTTGCCCATCGCGGGTTTCATCTGAC
ACAGAGACTGGACCTGTTGCGGTGTCGCGTGGCGGCGGGATATTTGACCT
TCCTGTTGCACCTGCGTTCTACGTGGAATCTCTGTTGGGGAATGTCGCAT
CGCGACCCCCCAAGTGGATGACATGCTTTGGTATCACCAAGAAGCAGCAG
CTATCAAGTCTCGTCCGTGGTTGACTCTGCTCTGTGGCAAGGTGCCCGGT
CTCTTTCCGCACAAGGGCGTCCTCCGTTGTAACTCAGTTATTTGATGGAA
ATCTGTCAGGCGTTGCTAAATTTGGGTTTCGTGTACCCGGCCAACAAAAA
AATGCGGCGCAATCGAAACTCCTAGAATTGTTACTCTCTTGTACACGTTG
GTCGCGAACATCCACGTGCCCCCCAGAGGGTATATAGTTTTTGGTGTGTT
CAGAAAGGTCCTGTACCCCGCACTTTACACCAATAGTGAGTACCAAACGC
TACATCGCTGTTGGCAGCTAGCCTAACCTCTGACAAGTTGACGAGCGTGG
GCAACAACAGGCTCAAGCGACCACGCTAGTTTTGACTGCTGCAAAGTCGA
GGGAGGCCTTGCAGATTTACTTGGTGGGCAACGGGTGGCATGAGACTCGG
GTTGTGGAGGTGATGTTTCCCCCTCAACTGCTGTACGCCGCATCCTTGAT
TTTTCGCCGTACTGCTCACCAGGCCCTCATACAGCGGCATGGTATCGTCC
GACCACCGTTGACCGACTCGGACGCTATCGGGGGAGATCGGCGTCTATAT
GCGGCTGCCTTGGAGGTGGTAGTAGGCAGCCACTGCCATGTCAGGTGGGG
CTTTTCGAATTTGTTGCACCGCCGTATCGGTACAAACACAACGCTGCTTG
CTTTGACGCAAGCGATTCCAAAGCAACGAAAAATACGTAGATGTGTGTCA
GATGTTCGCTGACCGTGGCACTGCTCACCACGCGCTTTGCTATTGCCGTT
GCAACCTTTTGCTCTTCCACGATCCGCTCCGTAGGCCTGAGCGACTTGCA
TGGTCTCTGCAGAGGCTAATTCGCACGATCCGCATGGCAGACCACAACAA
CCTCGAGGTAGTTGCGGATAGGGCCGCGGAGAATGAAGCCAAGGAGGCCG
AGGGCGTGCCGCTGGAAGATAGAACAGTTTGGGAGCAAGACGCGATGGTA
GCCATTTCACTCGAAATATTCTTCCCGGGAGCTTTGAAGGGCGTCGACGG
AGCGGACAAGGTTGGCGCAGGTGACATACATTGTACCTCGTACCAGGGGC
TGGGGCTGATGGTTCAGGCACACGTTTGCTGGTGTTTCTCACTTTTTGTC
TACTCGAAACTTGCCGGTTCACCCAAGGCTCGCCTCGCGTAGGATCGCAG
GTTATTTTTTTTTGTTGCCCCTGCTCCTCGCTACGGACGTAAGCTGCACC
AGCACGGCCATGCCTGTTGTAGGTGGGTCTTTCTGGTTCCACATGATGGA
CTGACTCATGTGTGTGGAAAGAATGTACTTGAGAAAGATGGATTGCACGT
AATGCCGCCGGTCCATGTAGAGCGTGACTCTTTTGGTGTTCGTGCGCTGC
AGGCTTTGCAGCCATCCGAGAGCTGTCTTCGAAGTGGGCATTGGCGGAAT
CCCTAGGGCTTACCGAGGACCTGGAGAACAACGGGCAAACGCCTTGCGTC
AAACGGCGAAGAAGAAAGGGAAAGGTGGCCGGACCCAGGAACACGGTAAG
CTTGTTGTAAGTTGTCACTTCCCGTGTGTCTTAAGGAATTTCGAGTGCCC
AAGATTTTCCAATTTTCTGCTTCCCACGCTCTGCGCAAGCAGAAGGAAAT
GCTTGTGCCATAACGCTCTCTCACGGTGTTCCGCCCCGTGCATGTATGGC
CATGTTTTCATCCATCGGACCGGATCGACGCCTCGGTCTTGCCGCCTCAA
GACCACGAAGAGAGCACTCCGGGTACTGCGGCACCAGGAGAGACGTGCCA
GGGCGGCAGGGGAGCGGAATACCCGATCACTATCACCGTCGCCATTGTCA
GCAGGGAGGGGTTTCGAGCTGGACACCCGGAACAATTTGCCGCGGCCGGA
GGTTGTAATAGAGCCCACAGGAACGCCAGCCAAGGGCGTCTACCTGATCT
CACACCCACTGTCGTTTCTGTACGCGCCCGAGGAGACGTTTCATCGCTCG
GTGGTACTGCTGGTCGACCACTCGCCGTTGGGATCGTACGGCCTGGTCGT
GAACAAGGACAAGGGCGAGACACTGGAAGAAGCCTTGTGCGAGGATGCGC
TCCCGTTGGCATCTGATGCACTGCAGCAAGTGCTGAAAAATCCTGTCAGA
GTTGGGGGCCCCGTCATGTCGCGCCTGGCTTGGCTGCACCCTCACAAGGA
CGTCGGGGGGGTTCCGTTGGCCGAGGGCGCCGAGAAACCGGTAAGGACAT
TCTCCAGGGATGACATGGCATAGTAGTGTAGCTTCAGAAAGCTGTGTGGA
GGAGGGTGTTGGGCGGTTGGCGCTCAGCCTGTCGTTCGATCGTTTTTGGC
ACCGTCGTGATCCATTCTCGGACGAATCGTCGCTGGCCTTGGTTGTTTCT
CACCCAGAGATGATTGGACCTGTTGGATGTGTTGGAGAGATTGGACGAAA
TTGCGACAGAAGCGTCGCGCTTTTCGGGAAGGAACGTGACTTATCGTATG
TCAACGAATATGAACTTGTATCCTGTTGTACAGTAGACCAGTGCATGCCC
GCGCGCGCCCTTTTGCCAGTGCTTCAGTTCCTTCAAGCTACGCGGCATGA
GGTTGCACGTGTGATGCCCGTCCGTTGTGTCCGGTTCGTTTGACTTGTAT
GTTGGCGTGCCAGTACTATAACTTCGCAGTCGTTTTTGTTTATAGCAGCT
GCGGCTGGTATTCCACGTGAACGCGTCACTTCTTTCGGTGACTCCCTTGG
TTTGGCGCTCAGGTGTTCTTCTGCGGGAAGATGGAGAAAGCGGCGGAGCT
GTTGACCAAGGGCACCGCTAAACCGGCTGATTTCTCCCTGGTGGTGGGTG
CATCAGCGTGGGATGTGAGTCGATTCTGCTCTAATGTGACGTCGGAAATG
GTGTACAATGTGCGGGACAAACACGACTCCTTAAGGCGTCCCTGGAAAAG
TCCGCTCTCGTACCCTTACCACTGATTCTGTATCTTCTGTGCTTGATGTT
TGTGGAGCGATGTCCCTTTGAGTTGTCGTGCCTCTGATTCCCATTTTATC
ACGATATCACGTAGAGCGGCCTCTTTCCCACCGCATGACGTGCCTTTCTC
CCCATCCCAGCTTCCACTCCACTTTCATCAACTTTTGGCGAAAGACACGG
CCTGACGTGTCGTAGACTGTTGCATGCTGTTGATTCTGAGAGTTGTCATA
CCTCGTTGACGAGATTGCTTGGCATTATGCAACGTCGAAGATTACCGTTG
GTCGTGCAGACATGTGCGGGAGCACCAAATATCGTCTTACCACTCAGTAC
ATCAAACGCAGCATGAGATAGGACTTTTTCTGAGCTCGGTGGCGTAATCG
CGCAGTGATGCCGCACTTCCATGCTGCTACTCGTCGTGTGTCAACGTGTT
TGACTCCCCCGCTCTTGTTCCTCTTGGCCTTGTTGCTCAGGCTGGCCAAC
TGCAAGGCGAATTGAACCACGGCTTATGGATCATGGCGAAGGTACGTATT
GTACCTACAGTAGGTGCAAGGTGGGAGTTTTTTACGGTACGAACCGTTGG
GGTCTTGGGGCCATCCTAGATCGGCTCCACCTTGTCCACTCCAACTAGTA
GTGTAGGGGACAAATTTTGGCGCGAGCAGACGTACGATAGGCATCGGACC
GAGCGGGAGCTCCGCTCTGGTTTCACGTTGTTGCTGTTGGAATTTCTCTT
CGGATCACCAGCTTGAATGATAATACATGGCATTTCGGAAACATATCGCA
AATCATGAGTATTAACGCGTAGATGAGGCGAAGCAGTAAAACGGGATTTG
TGAGACGTACTCTCGGAACATGGATCCATGAAGAATGCGCAACAGATACT
ATAGACAGTCCCAAGTCCGGTATTGTGCTCTCTCAGCAACCTATTCTACT
ACCTTCAGATCGCTGCTGTCATGCGTTTTTCGCGTGGGGCTGTTCAGCCC
CACTGTTCTCGGCTGAACAGTTGTGCAACAGCAGTACATGTCGCTCATTT
TGCGTGTTCTCCGGCACAATCACCTGCCTGTGTCCCGTGTTATGAAAACA
TAACGTTTTGCTCCATATTTGGTGCTGCATGTGTTGAGTTTTTGGGTGAG
AACACCGCGACAGCGGGGCACCTTGGAAAGCACAATTAGCTGGTTGCACG
CACTTCCTATTCTCTTCCCTTCTCCAACATGGCGCCACGATTCACCCCAC
TTCGCGACGTACCCGCAGGCACCGGCAAGTTTCGCCTTGGCTGGGGGTGA
AGACATGTGGCGAGACATGTTGGAAGCTATGGGAGGACCGTACGCTGCGA
TGGCCCGAGTGCCTCACGGCCGGCAGTGGGCAAGGGCCGGGGTGAAGATC
TCACCGTCTGACTGGCCATGATCTACTGCTGTGGCTTGTACGATCGTAGG
GTTCCCTTGGTGTTTCTTGTGGATGTATGCCGTGCGAGGGATGCGGCCTG
TGTTCAGCTGCGCATCACGTGTGTTTCGTGATTGAGCGATGACCACACAA
CCCAGGGTCACCAGCATCTTGCGTGATGATAAAATAGGGTCGGCGGTGCT
TATGTGTAAAAATCAACGAATGAGACTGTGGCATCGCTGGTGGTACGTAC
GAAACAGAAACTCGGGCACATTCTAGGCCGGATGCGCTTGGACAGTGTAC
GTTCTGGGTTTGTTTGTCCATGCATGTGGCACCTCGAACCTACTGCGCGA
ATGGAGAAGCTAGGCACACGCGGTCTGCAGCGCAATTTTGCTCACCGTTA
AGATTAAGCTGGGCGTGTGCGTGGGCCTGCAGGCCACGTATGGGTGTACC
CCGGGTATCGCTTCTTCCCCGCATGCGAGCGAGGAATGTCGTCTAGTCGC
TCACACACCTGGCCGGATAACAGGAAAGATCGACCTCTTTTTCCAAGTCC
GATTTCTAGTCACAAGCAGTAGCTGAAGTAATCTGCTTCACCCCTGTTTT
ACTGACCGCGTCATAGTGCAAGCCCATGGCAGGCAGGTTTGTTCTTAGTG
AGACGCGCACAGACGGAT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig127:15821..21888-

>mRNA_Ecto-sp13_S_contig127.2231.1 ID=mRNA_Ecto-sp13_S_contig127.2231.1|Name=mRNA_Ecto-sp13_S_contig127.2231.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1374bp|location=Sequence derived from alignment at Ecto-sp13_S_contig127:15821..21888- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGGTGTCGTGGAAAAGGCGGTTTACCGCGCAGTGTTGCGTAAAGCGCG
GCTGTTCGACAAGAACATAGCAGCCAAGGCCCTCATACAGCGGCATGGTA
TCGTCCGACCACCGTTGACCGACTCGGACGCTATCGGGGGAGATCGGCGT
CTATATGCGGCTGCCTTGGAGGTGGTAGTAGGCAGCCACTGCCATGTCAG
GCCTGAGCGACTTGCATGGTCTCTGCAGAGGCTAATTCGCACGATCCGCA
TGGCAGACCACAACAACCTCGAGGTAGTTGCGGATAGGGCCGCGGAGAAT
GAAGCCAAGGAGGCCGAGGGCGTGCCGCTGGAAGATAGAACAGTTTGGGA
GCAAGACGCGATGGTAGCCATTTCACTCGAAATATTCTTCCCGGGAGCTT
TGAAGGGCGTCGACGGAGCGGACAAGGTTGGCGCAGGCTTTGCAGCCATC
CGAGAGCTGTCTTCGAAGTGGGCATTGGCGGAATCCCTAGGGCTTACCGA
GGACCTGGAGAACAACGGGCAAACGCCTTGCGTCAAACGGCGAAGAAGAA
AGGGAAAGGTGGCCGGACCCAGGAACACGACCACGAAGAGAGCACTCCGG
GTACTGCGGCACCAGGAGAGACGTGCCAGGGCGGCAGGGGAGCGGAATAC
CCGATCACTATCACCGTCGCCATTGTCAGCAGGGAGGGGTTTCGAGCTGG
ACACCCGGAACAATTTGCCGCGGCCGGAGGTTGTAATAGAGCCCACAGGA
ACGCCAGCCAAGGGCGTCTACCTGATCTCACACCCACTGTCGTTTCTGTA
CGCGCCCGAGGAGACGTTTCATCGCTCGGTGGTACTGCTGGTCGACCACT
CGCCGTTGGGATCGTACGGCCTGGTCGTGAACAAGGACAAGGGCGAGACA
CTGGAAGAAGCCTTGTGCGAGGATGCGCTCCCGTTGGCATCTGATGCACT
GCAGCAAGTGCTGAAAAATCCTGTCAGAGTTGGGGGCCCCGTCATGTCGC
GCCTGGCTTGGCTGCACCCTCACAAGGACGTCGGGGGGGTTCCGTTGGCC
GAGGGCGCCGAGAAACCGGTGTTCTTCTGCGGGAAGATGGAGAAAGCGGC
GGAGCTGTTGACCAAGGGCACCGCTAAACCGGCTGATTTCTCCCTGGTGG
TGGGTGCATCAGCGTGGGATGCTGGCCAACTGCAAGGCGAATTGAACCAC
GGCTTATGGATCATGGCGAAGGCACCGGCAAGTTTCGCCTTGGCTGGGGG
TGAAGACATGTGGCGAGACATGTTGGAAGCTATGGGAGGACCGTACGCTG
CGATGGCCCGAGTGCCTCACGGCCGGCAGTGGGCAAGGGCCGGGGTGAAG
ATCTCACCGTCTGACTGGCCATGA
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