prot_Ecto-sp13_S_contig1269.2226.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1269.2226.1
Unique Nameprot_Ecto-sp13_S_contig1269.2226.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length176
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1269.2226.1 vs. uniprot
Match: D8LE00_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE00_ECTSI)

HSP 1 Score: 272 bits (696), Expect = 3.340e-91
Identity = 139/175 (79.43%), Postives = 146/175 (83.43%), Query Frame = 0 
Query:    1 MRQRQLSRGVEATLVFPGLGGISKKRRPVILYTEDNGESICWIKTGANGSGEPYRIRCKTLLEVKDKSGAGSKAESPATVARCGGESHEVEGAFGSEFDEQEXXXXXXXXXXXXXXXXXXXXXXXAGVRINLKWLPQPTWSKRTVKLVDVQTACPGVFTRGMQQLLSFNSDLQSY 175
            +RQRQLSRGVEATLVFPG GGISKKRRPVILYTEDNGESICWIKTGANGSGEPYRIRCKTLLEV+DKSGAGS AESPATVA  GGE HEVEGAFGSE+ EQ+                       AGVRINLKWLPQPTWS+RTVKLVDVQTACPG+FTRGMQQLLSFN+DLQSY
Sbjct:   10 VRQRQLSRGVEATLVFPGFGGISKKRRPVILYTEDNGESICWIKTGANGSGEPYRIRCKTLLEVRDKSGAGSSAESPATVAGSGGELHEVEGAFGSEWGEQKEDAGGVGGTSSGYGTAAAA----AGVRINLKWLPQPTWSRRTVKLVDVQTACPGMFTRGMQQLLSFNTDLQSY 180
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BLAST of mRNA_Ecto-sp13_S_contig1269.2226.1 vs. uniprot
Match: A0A6H5KTP6_9PHAE (Ig-like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTP6_9PHAE)

HSP 1 Score: 254 bits (649), Expect = 1.000e-81
Identity = 149/171 (87.13%), Postives = 153/171 (89.47%), Query Frame = 0 
Query:    5 QLSRGVEATLVFPGLGGISKKRRPVILYTEDNGESICWIKTGANGSGEPYRIRCKTLLEVKDKSGAGSKAESPATVARCGGESHEVEGAFGSEFDEQEXXXXXXXXXXXXXXXXXXXXXXXAGVRINLKWLPQPTWSKRTVKLVDVQTACPGVFTRGMQQLLSFNSDLQSY 175
            +LSRGVEATLVFPGLGGISKKRRPVILYTEDNGESICWIKTGANGSGEPYRIR KTLLEVKDKSGAGS+AES   VARCGG +H VEGAF SE  EQE     XXXXXXXXXXXXXXX    GVRINLKWLPQPTWSKRTVKLVDVQTACPG+FTRGMQQLLSFNSDLQSY
Sbjct:  181 ELSRGVEATLVFPGLGGISKKRRPVILYTEDNGESICWIKTGANGSGEPYRIRSKTLLEVKDKSGAGSRAES---VARCGGGAHGVEGAFRSECGEQEEDARGXXXXXXXXXXXXXXXA--TGVRINLKWLPQPTWSKRTVKLVDVQTACPGIFTRGMQQLLSFNSDLQSY 346
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1269.2226.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LE00_ECTSI3.340e-9179.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KTP6_9PHAE1.000e-8187.13Ig-like domain-containing protein n=1 Tax=Ectocarp... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1269contigEcto-sp13_S_contig1269:9182..10637 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1269.2226.1mRNA_Ecto-sp13_S_contig1269.2226.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1269 9164..10637 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1269.2226.1 ID=prot_Ecto-sp13_S_contig1269.2226.1|Name=mRNA_Ecto-sp13_S_contig1269.2226.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=176bp
MRQRQLSRGVEATLVFPGLGGISKKRRPVILYTEDNGESICWIKTGANGS
GEPYRIRCKTLLEVKDKSGAGSKAESPATVARCGGESHEVEGAFGSEFDE
QEEDAGGGGGTSSGYGTAAAAAAAAAGVRINLKWLPQPTWSKRTVKLVDV
QTACPGVFTRGMQQLLSFNSDLQSY*
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