prot_Ecto-sp13_S_contig12668.2209.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12668.2209.1
Unique Nameprot_Ecto-sp13_S_contig12668.2209.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length442
Homology
BLAST of mRNA_Ecto-sp13_S_contig12668.2209.1 vs. uniprot
Match: D8LKL9_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKL9_ECTSI)

HSP 1 Score: 705 bits (1820), Expect = 4.980e-240
Identity = 385/443 (86.91%), Postives = 399/443 (90.07%), Query Frame = 0
Query:    1 MRPTSFPVSFVDLIRLLRVKGRGDKRQAKILVLLLRVKNSMLRAPRAARPRQGMTGIRRIRYRVGRAASAIVGSTSPTPTLASTVVSATSKSWKKTATSAPAAAATGHEPSATSPEVGPASGKGDRVDGCVSPPEHLDPSRRDETSVGTAAASGAADDSPDKDKRHGSEEQKQVARAAEEELTPVQTAVMEVDKRLKGLLEAGGILRGTTSGRECLQGFPRGTPVWENHCDRVGGRDEGGGGGRRVDGASDVVGDEDAAGGAMGWARKFCEADDGRFPSAESGEGIALGKVLAKHVVRDGDVGLVGTSPPTLLVHGLCIRVRHGESNRVLRVKRRPPARGHGEDNAERHQHEWAAVARQGVQGCRLRIGTKKEVASALAATFAGLTKEPNLASSS-SIAATPRTLGTLDMTTDKGWRELFVPLELSASTAVAEAGPLRLRLLV 442
            MRPTSFPVSFVDLIRLLRVKGRGDKRQAKILVLLLRVKNSMLRA R ARPRQG+TG+R +RYRVG AASAIVGST  TPTLASTVVSATS+S KKTAT APAAAATGH+ S TSPEVGPASGKGDR DG VSPPEHLDPSRRDETSV TAAASGAADDSPDKDK HGSEEQKQVAR  EEELTPVQ AV+ VDKRLKGLLEAGGILRGTTSGRECLQGFPRGTPVWENHC RVGGRDEG           DVV DED AGGAMGWARKFCE+DDGRFPS ESGEGI+LGKVLAKHVVRDGDVGLVGTSPPTLLVHGLCIRVRH ESNRVLRVKR PPA GHGEDNAERH+ EWA+VARQGV+GCRLRIGTKKEVASALAATFAGLTK+PNLAS+S S AATPRTLGTLDMTTDKGWRELFVP EL  STAV EAGPL+L LLV
Sbjct:  874 MRPTSFPVSFVDLIRLLRVKGRGDKRQAKILVLLLRVKNSMLRAARVARPRQGLTGMRCVRYRVGGAASAIVGSTRSTPTLASTVVSATSRSPKKTATCAPAAAATGHDSSVTSPEVGPASGKGDRADGGVSPPEHLDPSRRDETSVRTAAASGAADDSPDKDKHHGSEEQKQVARVTEEELTPVQAAVLAVDKRLKGLLEAGGILRGTTSGRECLQGFPRGTPVWENHCGRVGGRDEGXXXXXXXXXXXDVVDDEDVAGGAMGWARKFCESDDGRFPSDESGEGISLGKVLAKHVVRDGDVGLVGTSPPTLLVHGLCIRVRHAESNRVLRVKRHPPASGHGEDNAERHEDEWASVARQGVKGCRLRIGTKKEVASALAATFAGLTKQPNLASTSTSSAATPRTLGTLDMTTDKGWRELFVPPELLVSTAVTEAGPLQLTLLV 1316          
BLAST of mRNA_Ecto-sp13_S_contig12668.2209.1 vs. uniprot
Match: A0A6H5K9H7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9H7_9PHAE)

HSP 1 Score: 696 bits (1796), Expect = 6.310e-237
Identity = 395/498 (79.32%), Postives = 407/498 (81.73%), Query Frame = 0
Query:    1 MRPTSFPVSFVDLIRLLRVKGRGDKRQAKILVLLLRVKNSMLRAPRAARPRQG--------------------------------------------------------MTGIRRIRYRVGRAASAIVGSTSPTPTLASTVVSATSKSWKKTATSAPAAAATGHEPSATSPEVGPASGKGDRVDGCVSPPEHLDPSRRDETSVGTAAASGAADDSPDKDKRHGSEEQKQVARAAEEELTPVQTAVMEVDKRLKGLLEAGGILRGTTSGRECLQGFPRGTPVWENHCDRVGGRDEGGGGGRRVDGASDVVGDEDAAGGAMGWARKFCEADDGRFPSAESGEGIALGKVLAKHVVRDGDVGLVGTSPPTLLVHGLCIRVRHGESNRVLRVKRRPPARGHGEDNAERHQHEWAAVARQGVQGCRLRIGTKKEVASALAATFAGLTKEPNLASSSSIAATPRTLGTLDMTTDKGWRELFVPLELSASTAVAEAGPLRLRLLV 442
            MRPTSFPVSFVDLIRLLRVKGRGDKRQAKILVLLLRVKNSMLR PR ARPRQG                                                        MT IRRIRYR+G  ASAIVGSTSPTPTLASTVVSATS+S KKTATS PAAAATGH  S TSPEVGPASGKGDRVDG VSPPEH +PSRRDETSV TAAASGAADDS  KDK HGSEE+KQVARAAEEELTPVQ AVM VDKRL+ LL AGGILRGTTSGRECLQGFPRGTPVWENHC RVGGRDEG GG RRVDGA+D+VGDEDAAGGAMGWARKF   DDGRFPS ESGEGIALGKVLAKHVVRDGDVGL+GTSPPTLLVHGLCIRVRHGESNRVLRVKRRPPA GHGEDNA+RHQ EWAAVARQGVQGCRLRIGTK+EVASALAATFAGLT EPNL S   IAATPRTLGTLDMTTDKGWRELFVPLELSASTAV+EAGPL+L LLV
Sbjct:  843 MRPTSFPVSFVDLIRLLRVKGRGDKRQAKILVLLLRVKNSMLRVPRVARPRQGEESIPINPQPGRLEGGVIAKISPDVTSSSPCSTKPRQTTRPPTKTDQYQLILVAQGMTSIRRIRYRIGGTASAIVGSTSPTPTLASTVVSATSRSLKKTATSVPAAAATGHYSSVTSPEVGPASGKGDRVDGGVSPPEHSNPSRRDETSVRTAAASGAADDSLAKDKHHGSEERKQVARAAEEELTPVQAAVMAVDKRLQDLLIAGGILRGTTSGRECLQGFPRGTPVWENHCGRVGGRDEGSGG-RRVDGANDIVGDEDAAGGAMGWARKFFGVDDGRFPSDESGEGIALGKVLAKHVVRDGDVGLIGTSPPTLLVHGLCIRVRHGESNRVLRVKRRPPASGHGEDNAKRHQDEWAAVARQGVQGCRLRIGTKREVASALAATFAGLTTEPNLVS---IAATPRTLGTLDMTTDKGWRELFVPLELSASTAVSEAGPLQLTLLV 1336          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12668.2209.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LKL9_ECTSI4.980e-24086.91Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5K9H7_9PHAE6.310e-23779.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12668contigEcto-sp13_S_contig12668:1160..4631 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12668.2209.1mRNA_Ecto-sp13_S_contig12668.2209.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12668 1151..4631 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12668.2209.1 ID=prot_Ecto-sp13_S_contig12668.2209.1|Name=mRNA_Ecto-sp13_S_contig12668.2209.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=442bp
MRPTSFPVSFVDLIRLLRVKGRGDKRQAKILVLLLRVKNSMLRAPRAARP
RQGMTGIRRIRYRVGRAASAIVGSTSPTPTLASTVVSATSKSWKKTATSA
PAAAATGHEPSATSPEVGPASGKGDRVDGCVSPPEHLDPSRRDETSVGTA
AASGAADDSPDKDKRHGSEEQKQVARAAEEELTPVQTAVMEVDKRLKGLL
EAGGILRGTTSGRECLQGFPRGTPVWENHCDRVGGRDEGGGGGRRVDGAS
DVVGDEDAAGGAMGWARKFCEADDGRFPSAESGEGIALGKVLAKHVVRDG
DVGLVGTSPPTLLVHGLCIRVRHGESNRVLRVKRRPPARGHGEDNAERHQ
HEWAAVARQGVQGCRLRIGTKKEVASALAATFAGLTKEPNLASSSSIAAT
PRTLGTLDMTTDKGWRELFVPLELSASTAVAEAGPLRLRLLV
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