mRNA_Ecto-sp13_S_contig10001.22.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig10001.22.1
Unique NamemRNA_Ecto-sp13_S_contig10001.22.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig10001.22.1 vs. uniprot
Match: D8LB44_ECTSI (Methyltransf_25 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB44_ECTSI)

HSP 1 Score: 654 bits (1687), Expect = 9.790e-237
Identity = 323/325 (99.38%), Postives = 325/325 (100.00%), Query Frame = 1 
Query:    1 YYFDSYSHFGIHEEMLKDEVRTTSYMNAIEHNKHLFAGKVVMDVGCGTGILSMFAARAGAKQVVGIECSTIIEQARKIVAANGFADKITLIKSKCEDIASLEALAGVDKVDIIISEWMGYFLLYESMLDTVIYARDRWLKEGGLMLPDKATLFVGAIEDEQYKKEKIDFWDEVYGFDMSVIKEIALTEPLVDIVEGKAVATDCQAILSLDLADCKKEELQFKSEFVLTAHRNDFVHAIVAYFDCQFSQLHKPVRFSTGPFTEYTHWKQTVFYLRQPLTICKGESIKGKVTVKPNDKNPRDLDIALRLDHQGSVMSLHATQEYRLR 975
            YYFDSYSHFGIHEEMLKDEVRTTSYMNAIEHNKHLFAGKVVMDVGCGTGILSMFAARAGAKQV+GIECSTIIEQARKIVAANGFADKITLIKSKCEDIASLEALAGVDKVDIIISEWMGYFLLYESMLDTVIYARDRWLKEGGLMLPDKATLFVGAIEDEQYKKEKIDFWDEVYGFDMSVIKEIALTEPLVDIVEGKAVATDCQAILSLDLADCKKEELQFKSEFVLTAHRNDFVHAIVAYFDCQFSQLHKPVRFSTGPFTEYTHWKQTVFYLRQPLTICKGESIKGK+TVKPNDKNPRDLDIALRLDHQGSVMSLHATQEYRLR
Sbjct:   39 YYFDSYSHFGIHEEMLKDEVRTTSYMNAIEHNKHLFAGKVVMDVGCGTGILSMFAARAGAKQVIGIECSTIIEQARKIVAANGFADKITLIKSKCEDIASLEALAGVDKVDIIISEWMGYFLLYESMLDTVIYARDRWLKEGGLMLPDKATLFVGAIEDEQYKKEKIDFWDEVYGFDMSVIKEIALTEPLVDIVEGKAVATDCQAILSLDLADCKKEELQFKSEFVLTAHRNDFVHAIVAYFDCQFSQLHKPVRFSTGPFTEYTHWKQTVFYLRQPLTICKGESIKGKITVKPNDKNPRDLDIALRLDHQGSVMSLHATQEYRLR 363
[Close]
BLAST of mRNA_Ecto-sp13_S_contig10001.22.1 vs. uniprot
Match: A0A6H5KL53_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL53_9PHAE)

HSP 1 Score: 473 bits (1218), Expect = 8.340e-162
Identity = 239/260 (91.92%), Postives = 245/260 (94.23%), Query Frame = 1 
Query:  187 VVGIECSTIIEQARKIVAANGFADKITLIKSKCEDIASLEALAGVDKVDIIISEWMGYFLLYESMLDTVIYARDRWLKEGGLMLPDKATLFVGAIEDEQYKKEKIDFWDEVYGFDMSVIKEIALTEPLVDIVEGKAVATDCQAILSLDLADCKKEELQFKSEFVLTAHRNDFVHAIVAYFDCQFSQLHKPVRFSTGPFTEYTHWKQTVFYLRQPLTICKGESIKGKVTVKPNDK--NPRDLDIAL----RLDHQGSVMSL 948
            V+GIECSTIIEQARKIVAANGFADKITLIKSKCEDIASLEALAGVDKVDIIISEWMGYFLLYESMLDTVIYARDRWLKEGGLMLPDKATLFVGAIEDEQYKKEKIDFWDEVYGFDMSVIKEIALTEPLVDIVEGKAVATDCQAILSLDL+DCKKEELQFKSEFVLTAHRNDFVHAIVAYFDCQFSQLHKPVRFSTGPFTEYTHWKQTVFYLRQPLTICKGESIKGK+TVKPNDK   P   D A     R+ H+G+  SL
Sbjct:  342 VIGIECSTIIEQARKIVAANGFADKITLIKSKCEDIASLEALAGVDKVDIIISEWMGYFLLYESMLDTVIYARDRWLKEGGLMLPDKATLFVGAIEDEQYKKEKIDFWDEVYGFDMSVIKEIALTEPLVDIVEGKAVATDCQAILSLDLSDCKKEELQFKSEFVLTAHRNDFVHAIVAYFDCQFSQLHKPVRFSTGPFTEYTHWKQTVFYLRQPLTICKGESIKGKITVKPNDKVREPCLRDPASQGGPRMGHKGTCHSL 601
[Close]
BLAST of mRNA_Ecto-sp13_S_contig10001.22.1 vs. uniprot
Match: W7TH36_9STRA (Protein arginine N-methyltransferase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TH36_9STRA)

HSP 1 Score: 462 bits (1188), Expect = 1.480e-160
Identity = 219/325 (67.38%), Postives = 265/325 (81.54%), Query Frame = 1 
Query:    1 YYFDSYSHFGIHEEMLKDEVRTTSYMNAIEHNKHLFAGKVVMDVGCGTGILSMFAARAGAKQVVGIECSTIIEQARKIVAANGFADKITLIKSKCEDIASLEALAGVDKVDIIISEWMGYFLLYESMLDTVIYARDRWLKEGGLMLPDKATLFVGAIEDEQYKKEKIDFWDEVYGFDMSVIKEIALTEPLVDIVEGKAVATDCQAILSLDLADCKKEELQFKSEFVLTAHRNDFVHAIVAYFDCQFSQLHKPVRFSTGPFTEYTHWKQTVFYLRQPLTICKGESIKGKVTVKPNDKNPRDLDIALRLDHQGSVMSLHATQEYRLR 975
            YYFDSYSHFGIHEEMLKDEVRT SYMNAI  N+HLF GKVV+DVGCGTGILSMFAA+AGA +V+G++CSTI+EQA++IV ANG  D+ITLI+ K E+I        V+KVDIIISEWMGYFLLYESMLDTV+YARD+WL  GGL+LPDKATL V AIEDE+YK+EKIDFWD+VYGFDMS IK +A+ EPLVD+VE K+V T    +L LDL  C K +L F + F L A RND+VHA+VAYFDC F+QLHKP+ FSTGPF +YTHWKQTVFYL++ LT+C GE++ G ++  PND+NPRDLDI + L+ +G     H +Q++RLR
Sbjct:   57 YYFDSYSHFGIHEEMLKDEVRTRSYMNAIMRNRHLFEGKVVLDVGCGTGILSMFAAKAGAAKVIGVDCSTILEQAKQIVVANGLEDRITLIRGKIEEID-----LPVEKVDIIISEWMGYFLLYESMLDTVLYARDKWLVAGGLILPDKATLHVCAIEDEEYKQEKIDFWDDVYGFDMSAIKNLAILEPLVDVVEAKSVVTHQSVVLELDLLTCSKADLTFSANFSLPARRNDYVHALVAYFDCAFTQLHKPLTFSTGPFAKYTHWKQTVFYLQETLTVCAGEAVTGTISSAPNDRNPRDLDIHIDLNFEGRHCKAHVSQDFRLR 376
[Close]
BLAST of mRNA_Ecto-sp13_S_contig10001.22.1 vs. uniprot
Match: A0A836CCL3_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCL3_9STRA)

HSP 1 Score: 439 bits (1128), Expect = 1.480e-151
Identity = 216/326 (66.26%), Postives = 259/326 (79.45%), Query Frame = 1 
Query:    1 YYFDSYSHFGIHEEMLKDEVRTTSYMNAIEHNKHLFAGKVVMDVGCGTGILSMFAARAGAKQVVGIECSTIIEQARKIVAANGFADKITLIKSKCEDIASLEALAGVDKVDIIISEWMGYFLLYESMLDTVIYARDRWLKEGGLMLPDKATLFVGAIEDEQYKKEKIDFWDEVYGFDMSVIKEIALTEPLVDIVEGKAVATDCQAILSLDLADCKKEELQFKSEFVLTAHRNDFVHAIVAYFDCQFSQLHKPVRFSTGPFTEYTHWKQTVFYLRQPLTICKGESIKGKVTVKPNDKNPRDLDIALRLDHQGSVM-SLHATQEYRLR 975
            YYFDSYSHFGIHEEM+KDEVRT SY++AIE+NK L  GKVV+DVGCGTGILSMF AR GAK V+ IECS I +QA+ I+AANG + ++TL+ +KCED+A+L    G DKVDII+SEWMGYFLLYESMLDTV+Y RDRWLK GGL+LPD+A+L V AIEDEQY+ EKIDFWD VYGFDM VIKEIALTEPLVD+V+ K V ++  AIL LDL+ C K +L F SEF L   RND VHA+V++FDC FS+L  PV FST P   YTHWKQTVFYLR P+++C G++  G++TV PN  N RDLDIAL L  Q S   +L  +Q++RLR
Sbjct:   45 YYFDSYSHFGIHEEMIKDEVRTQSYLDAIENNKELIKGKVVLDVGCGTGILSMFCARVGAKHVIAIECSGIAKQAQAIIAANGLSQQVTLLHAKCEDVAALPG--GFDKVDIIVSEWMGYFLLYESMLDTVLYCRDRWLKPGGLLLPDRASLKVAAIEDEQYRAEKIDFWDSVYGFDMKVIKEIALTEPLVDVVDPKTVLSNESAILDLDLSTCTKADLAFSSEFSLAFTRNDTVHALVSHFDCAFSRLPSPVSFSTAPDAPYTHWKQTVFYLRDPVSVCAGDTATGRITVSPNAGNARDLDIALTLTFQRSGGGTLSVSQDFRLR 368
[Close]
BLAST of mRNA_Ecto-sp13_S_contig10001.22.1 vs. uniprot
Match: A0A7R9UF18_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UF18_9STRA)

HSP 1 Score: 434 bits (1115), Expect = 1.910e-149
Identity = 204/325 (62.77%), Postives = 252/325 (77.54%), Query Frame = 1 
Query:    1 YYFDSYSHFGIHEEMLKDEVRTTSYMNAIEHNKHLFAGKVVMDVGCGTGILSMFAARAGAKQVVGIECSTIIEQARKIVAANGFADKITLIKSKCEDIASLEALAGVDKVDIIISEWMGYFLLYESMLDTVIYARDRWLKEGGLMLPDKATLFVGAIEDEQYKKEKIDFWDEVYGFDMSVIKEIALTEPLVDIVEGKAVATDCQAILSLDLADCKKEELQFKSEFVLTAHRNDFVHAIVAYFDCQFSQLHKPVRFSTGPFTEYTHWKQTVFYLRQPLTICKGESIKGKVTVKPNDKNPRDLDIALRLDHQGSVMSLHATQEYRLR 975
            YYFDSYSHF IHEEMLKD VRT SY +AI  N HLF  KVVMDVGCGTGILSMFAARAGA  V+ +ECS I +QA++I+  N  +DKIT++K KCE+I   E   G+ KVDIIISEWMGYFLLYESMLDTVIYARDRWL E G+++P+ ATL++ AIED +Y ++KI+FWD VYGFDM  IKE+AL EPLVD VEG+ V ++   IL LDL  C+ E+L+F+S F L   R+D+ HA+VA+FDC F+QLH P+ FSTGP  EYTHWKQTVFYL+ PLT+C GE++ G ++ +PN  NPRDLDI++ +  QGS+M     Q +RLR
Sbjct:   53 YYFDSYSHFSIHEEMLKDTVRTLSYKHAIVRNAHLFKDKVVMDVGCGTGILSMFAARAGAAHVIAVECSAIADQAKQIIEDNELSDKITVLKKKCEEIQDDEMPNGITKVDIIISEWMGYFLLYESMLDTVIYARDRWLTEDGILMPNTATLYICAIEDAEYMEQKINFWDNVYGFDMRAIKELALLEPLVDTVEGECVISNAVEILELDLTTCRVEDLRFESTFSLPFQRDDYCHALVAFFDCGFTQLHTPIHFSTGPAAEYTHWKQTVFYLKTPLTVCAGETLSGSISCEPNKGNPRDLDISIAIHFQGSIMHAQGVQRFRLR 377
[Close]
BLAST of mRNA_Ecto-sp13_S_contig10001.22.1 vs. uniprot
Match: K3WUQ9_GLOUD (Methyltransf_25 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WUQ9_GLOUD)

HSP 1 Score: 428 bits (1101), Expect = 7.020e-148
Identity = 212/325 (65.23%), Postives = 248/325 (76.31%), Query Frame = 1 
Query:    1 YYFDSYSHFGIHEEMLKDEVRTTSYMNAIEHNKHLFAGKVVMDVGCGTGILSMFAARAGAKQVVGIECSTIIEQARKIVAANGFADKITLIKSKCEDIASLEALAGVDKVDIIISEWMGYFLLYESMLDTVIYARDRWLKEGGLMLPDKATLFVGAIEDEQYKKEKIDFWDEVYGFDMSVIKEIALTEPLVDIVEGKAVATDCQAILSLDLADCKKEELQFKSEFVLTAHRNDFVHAIVAYFDCQFSQLHKPVRFSTGPFTEYTHWKQTVFYLRQPLTICKGESIKGKVTVKPNDKNPRDLDIALRLDHQGSVMSLHATQEYRLR 975
            YYFDSYSHFGIHEEMLKD VRT +YMNAI  +KHLF  KVV+DVGCGTGILSMFAA+AGAK V G++CS I+ QAR+IV ANGFADKITL++ K E++        VDKVDIIISEWMGYFLLYESMLDTV+YARD++L EGG M PD+A L+V AIED +YK EK+DFWD VYGFDMS IKEIA  EPLVD V G A+ TD   IL +DL    KEEL F S F +TA R DF H +VAYFDC FS+ HK + FSTGP  +YTHWKQT+FYL + + I  GE I+G++T KPN  NPRDLDI + +   GS  S + T EY+LR
Sbjct:   21 YYFDSYSHFGIHEEMLKDTVRTKTYMNAIMQSKHLFKDKVVLDVGCGTGILSMFAAKAGAKHVYGVDCSGILTQAREIVKANGFADKITLLQGKMEELT-----LPVDKVDIIISEWMGYFLLYESMLDTVLYARDKYLVEGGAMFPDRAVLYVAAIEDGEYKAEKLDFWDNVYGFDMSCIKEIAKVEPLVDTVNGDALVTDVCPILDIDLTKVTKEELSFSSPFSITAFRQDFCHGLVAYFDCTFSRSHKQIAFSTGPKAKYTHWKQTIFYLEEEIAISPGEVIEGELTCKPNASNPRDLDIDITVRFDGSSGSYNQTHEYKLR 340
[Close]
BLAST of mRNA_Ecto-sp13_S_contig10001.22.1 vs. uniprot
Match: B8BYH6_THAPS (Methyltransf_25 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BYH6_THAPS)

HSP 1 Score: 428 bits (1100), Expect = 6.740e-147
Identity = 199/325 (61.23%), Postives = 260/325 (80.00%), Query Frame = 1 
Query:    1 YYFDSYSHFGIHEEMLKDEVRTTSYMNAIEHNKHLFAGKVVMDVGCGTGILSMFAARAGAKQVVGIECSTIIEQARKIVAANGFADKITLIKSKCEDIASLEALAGVDKVDIIISEWMGYFLLYESMLDTVIYARDRWLKEGGLMLPDKATLFVGAIEDEQYKKEKIDFWDEVYGFDMSVIKEIALTEPLVDIVEGKAVATDCQAILSLDLADCKKEELQFKSEFVLTAHRNDFVHAIVAYFDCQFSQLHKPVRFSTGPFTEYTHWKQTVFYLRQPLTICKGESIKGKVTVKPNDKNPRDLDIALRLDHQGSVMSLHATQEYRLR 975
            YYFDSYSH GIHEEMLKDEVRT +Y  AI++N+HLF GK+V+DVGCGTGIL MFAA+AGA  V G++CS+IIEQA+KI+ ANGF+D+ITLIK+K ED+        V  VDIIISEWMGYFLLYESML+TV+YARD++LKEGG++ PDKA +++ A+EDEQ K+E+IDFWD VYGFDMS +KE+AL EP+VD+V+ K+V ++   IL++D+  C +E+L F S F L AHR D+VH+ VAYF+C F+Q HKP+ FST P ++YTHWKQT+FYL + +T+C GE + G+++ KPN+KN RDLDI+L ++  G    +  T EYRLR
Sbjct:   76 YYFDSYSHHGIHEEMLKDEVRTKTYEMAIKNNRHLFEGKIVLDVGCGTGILCMFAAQAGAAHVYGVDCSSIIEQAQKIIYANGFSDEITLIKAKMEDVE-----LPVPSVDIIISEWMGYFLLYESMLNTVLYARDKFLKEGGIIFPDKAVMYLCAVEDEQMKRERIDFWDNVYGFDMSALKEVALKEPVVDVVDPKSVVSNAVPILNIDILKCTEEDLSFTSPFRLIAHRTDYVHSFVAYFECAFTQCHKPLGFSTSPQSKYTHWKQTIFYLNESITVCDGEELVGRISCKPNEKNERDLDISLEIEFDGKHSKVDKTVEYRLR 395
[Close]
BLAST of mRNA_Ecto-sp13_S_contig10001.22.1 vs. uniprot
Match: A0A024TEE3_9STRA (Methyltransf_25 domain-containing protein n=9 Tax=Aphanomyces TaxID=100860 RepID=A0A024TEE3_9STRA)

HSP 1 Score: 417 bits (1072), Expect = 1.990e-143
Identity = 209/325 (64.31%), Postives = 244/325 (75.08%), Query Frame = 1 
Query:    1 YYFDSYSHFGIHEEMLKDEVRTTSYMNAIEHNKHLFAGKVVMDVGCGTGILSMFAARAGAKQVVGIECSTIIEQARKIVAANGFADKITLIKSKCEDIASLEALAGVDKVDIIISEWMGYFLLYESMLDTVIYARDRWLKEGGLMLPDKATLFVGAIEDEQYKKEKIDFWDEVYGFDMSVIKEIALTEPLVDIVEGKAVATDCQAILSLDLADCKKEELQFKSEFVLTAHRNDFVHAIVAYFDCQFSQLHKPVRFSTGPFTEYTHWKQTVFYLRQPLTICKGESIKGKVTVKPNDKNPRDLDIALRLDHQGSVMSLHATQEYRLR 975
            YYFDSYSHFGIHEEMLKD VRT +YMNAI  N HLF GKVV+DVGCGTGILSMFAA+AGA  V G++CS II QA++I+A N F+D+ITLIK+K ED+        V  VDIIISEWMGYFLLYESMLDTV+YARD+WL  GGL+ PDKA LF+ AIED QYK EKIDFWD VYGFDMS IK+IA+ EPLVD V+G A+ ++   IL +DLA  KKE+L F S F L   R DF HA+VAYFDC F+  HKP+ FSTGP  +YTHWKQTVFYL   LT   G+ I+G +T  PN  NPRDLDI + +   G+  +L  T  YRLR
Sbjct:   25 YYFDSYSHFGIHEEMLKDSVRTKTYMNAILQNVHLFKGKVVLDVGCGTGILSMFAAKAGAAHVYGVDCSGIITQAKQIIADNDFSDRITLIKAKVEDME-----LPVPHVDIIISEWMGYFLLYESMLDTVLYARDKWLAPGGLLFPDKAVLFLAAIEDGQYKSEKIDFWDNVYGFDMSCIKKIAMLEPLVDTVDGDAIMSNATPILDIDLATVKKEDLAFSSPFSLVVSRQDFCHALVAYFDCAFTHCHKPISFSTGPRAKYTHWKQTVFYLSHALTCFPGDVIEGTLTCAPNATNPRDLDIDISVHFDGAS-TLDETMTYRLR 343
[Close]
BLAST of mRNA_Ecto-sp13_S_contig10001.22.1 vs. uniprot
Match: B7FRE3_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FRE3_PHATC)

HSP 1 Score: 421 bits (1081), Expect = 2.800e-143
Identity = 197/325 (60.62%), Postives = 251/325 (77.23%), Query Frame = 1 
Query:    1 YYFDSYSHFGIHEEMLKDEVRTTSYMNAIEHNKHLFAGKVVMDVGCGTGILSMFAARAGAKQVVGIECSTIIEQARKIVAANGFADKITLIKSKCEDIASLEALAGVDKVDIIISEWMGYFLLYESMLDTVIYARDRWLKEGGLMLPDKATLFVGAIEDEQYKKEKIDFWDEVYGFDMSVIKEIALTEPLVDIVEGKAVATDCQAILSLDLADCKKEELQFKSEFVLTAHRNDFVHAIVAYFDCQFSQLHKPVRFSTGPFTEYTHWKQTVFYLRQPLTICKGESIKGKVTVKPNDKNPRDLDIALRLDHQGSVMSLHATQEYRLR 975
            YYFDSY+H GIHEEMLKDEVRT +Y  AI  N+HLF  K+V+DVGCGTGILSMFA++AGAK V  ++CSTI  QAR IVA NGF DKIT+I+ K E+I        V +VDII+SEWMGYFLLYESMLDTV++ARD+WL  GG++ PDKA +++ A ED Q K ++ DFWD+VYGFDM+ IK+IA+ EP+VD+++ KA+ TD   IL+LD+  C K++LQF S+F L A RNDF+H +VAYF+C F+Q+HKP+ FST PF  YTHWKQT+FYL + +TIC+GES++G++T KPN +NPRDLDI L  D  G    +  T  YRLR
Sbjct:  126 YYFDSYAHHGIHEEMLKDEVRTRTYEMAILQNRHLFQDKIVLDVGCGTGILSMFASQAGAKHVYAVDCSTIAHQARLIVAKNGFGDKITVIQGKIEEID-----LPVAQVDIIVSEWMGYFLLYESMLDTVLFARDKWLVSGGVIFPDKAIMYLTAAEDSQVKHDRFDFWDDVYGFDMTAIKDIAIKEPVVDVIDPKALVTDSVPILTLDILTCTKDDLQFTSKFKLQAQRNDFIHGLVAYFECAFTQVHKPIGFSTAPFARYTHWKQTIFYLPRDVTICEGESVQGEITCKPNVRNPRDLDIGLSFDFAGRHCKIAETMNYRLR 445
[Close]
BLAST of mRNA_Ecto-sp13_S_contig10001.22.1 vs. uniprot
Match: A0A0P1B2T9_PLAHL (Protein arginine n-methyltransferase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B2T9_PLAHL)

HSP 1 Score: 416 bits (1068), Expect = 8.080e-143
Identity = 211/325 (64.92%), Postives = 238/325 (73.23%), Query Frame = 1 
Query:    1 YYFDSYSHFGIHEEMLKDEVRTTSYMNAIEHNKHLFAGKVVMDVGCGTGILSMFAARAGAKQVVGIECSTIIEQARKIVAANGFADKITLIKSKCEDIASLEALAGVDKVDIIISEWMGYFLLYESMLDTVIYARDRWLKEGGLMLPDKATLFVGAIEDEQYKKEKIDFWDEVYGFDMSVIKEIALTEPLVDIVEGKAVATDCQAILSLDLADCKKEELQFKSEFVLTAHRNDFVHAIVAYFDCQFSQLHKPVRFSTGPFTEYTHWKQTVFYLRQPLTICKGESIKGKVTVKPNDKNPRDLDIALRLDHQGSVMSLHATQEYRLR 975
            YYFDSYSHFGIHEEMLKD VRT +YMNAI  +KHLF  K V+DVGCGTGILSMFAA+AGAK V G++CS I+ QAR IV ANGFADKITLI+ K E+++       VD VDIIISEWMGYFLLYESMLDTV+YARD++L  GGLM PD ATLF+GAIED +YK EK+DFWD VYGFDMS IKEIA  EPLVD V   A+ TD   IL +DL    KEEL F S F LTA R DF HA+VAYFDC FS  HK + FSTGP  EYTHWKQTVFYL   L    GE I+     KPN  NPRDLDI + +   G   S +   E++LR
Sbjct:   24 YYFDSYSHFGIHEEMLKDTVRTKAYMNAILQSKHLFKNKTVLDVGCGTGILSMFAAKAGAKHVYGVDCSNILTQARDIVKANGFADKITLIQGKMEELS-----LPVDNVDIIISEWMGYFLLYESMLDTVLYARDKYLVSGGLMFPDHATLFIGAIEDGEYKTEKLDFWDNVYGFDMSCIKEIAKIEPLVDTVSSDALLTDVCPILDIDLTKVTKEELNFSSSFKLTAFRQDFCHALVAYFDCMFSATHKKLSFSTGPKAEYTHWKQTVFYLEGELACHPGEVIEXXXXXKPNASNPRDLDIDINVRFDGGSGSYNRLHEFKLR 343
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10001.22.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LB44_ECTSI9.790e-23799.38Methyltransf_25 domain-containing protein n=1 Tax=... [more]
A0A6H5KL53_9PHAE8.340e-16291.92Reverse transcriptase domain-containing protein n=... [more]
W7TH36_9STRA1.480e-16067.38Protein arginine N-methyltransferase n=2 Tax=Monod... [more]
A0A836CCL3_9STRA1.480e-15166.26S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A7R9UF18_9STRA1.910e-14962.77Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
K3WUQ9_GLOUD7.020e-14865.23Methyltransf_25 domain-containing protein n=1 Tax=... [more]
B8BYH6_THAPS6.740e-14761.23Methyltransf_25 domain-containing protein n=1 Tax=... [more]
A0A024TEE3_9STRA1.990e-14364.31Methyltransf_25 domain-containing protein n=9 Tax=... [more]
B7FRE3_PHATC2.800e-14360.62Predicted protein n=3 Tax=Phaeodactylum tricornutu... [more]
A0A0P1B2T9_PLAHL8.080e-14364.92Protein arginine n-methyltransferase n=1 Tax=Plasm... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10001contigEcto-sp13_S_contig10001:1..4715 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score654.8
Seed ortholog evalue2.1e-185
Seed eggNOG ortholog2880.D8LB44
Preferred namePRMT8
Model size978
KEGG rclassRC00003,RC02120,RC03388,RC03390
KEGG koko:K11434,ko:K11439
KEGG ReactionR11216,R11217,R11219
KEGG Pathwayko04068,ko04922,map04068,map04922
Hectar predicted targeting categoryother localisation
GOsGO:0000075,GO:0000077,GO:0000166,GO:0000278,GO:0000902,GO:0000904,GO:0001701,GO:0001889,GO:0001932,GO:0001933,GO:0001934,GO:0002682,GO:0002683,GO:0002684,GO:0003002,GO:0003674,GO:0003676,GO:0003677,GO:0003712,GO:0003713,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0005886,GO:0006325,GO:0006355,GO:0006357,GO:0006403,GO:0006405,GO:0006406,GO:0006464,GO:0006479,GO:0006611,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006950,GO:0006974,GO:0006977,GO:0006979,GO:0006996,GO:0007049,GO:0007093,GO:0007154,GO:0007165,GO:0007166,GO:0007275,GO:0007346,GO:0007389,GO:0007399,GO:0007417,GO:0007420,GO:0007552,GO:0007568,GO:0008104,GO:0008144,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008284,GO:0008327,GO:0008340,GO:0008469,GO:0008757,GO:0009266,GO:0009314,GO:0009408,GO:0009411,GO:0009416,GO:0009605,GO:0009628,GO:0009653,GO:0009790,GO:0009792,GO:0009888,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009898,GO:0009952,GO:0009966,GO:0009967,GO:0009987,GO:0009991,GO:0010259,GO:0010286,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010562,GO:0010563,GO:0010564,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010646,GO:0010647,GO:0010883,GO:0010948,GO:0015031,GO:0015833,GO:0015931,GO:0016020,GO:0016043,GO:0016273,GO:0016274,GO:0016275,GO:0016358,GO:0016569,GO:0016570,GO:0016571,GO:0016740,GO:0016741,GO:0018193,GO:0018195,GO:0018216,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019899,GO:0019900,GO:0019901,GO:0019919,GO:0021532,GO:0021903,GO:0021915,GO:0022008,GO:0022402,GO:0022607,GO:0023051,GO:0023052,GO:0023056,GO:0030030,GO:0030154,GO:0030182,GO:0030330,GO:0030519,GO:0030917,GO:0031056,GO:0031099,GO:0031100,GO:0031175,GO:0031224,GO:0031225,GO:0031226,GO:0031235,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031399,GO:0031400,GO:0031401,GO:0031503,GO:0031554,GO:0031570,GO:0031571,GO:0031667,GO:0031974,GO:0031981,GO:0032091,GO:0032259,GO:0032268,GO:0032269,GO:0032270,GO:0032501,GO:0032502,GO:0032784,GO:0032786,GO:0032872,GO:0032874,GO:0032879,GO:0032880,GO:0032968,GO:0032989,GO:0032990,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033554,GO:0034243,GO:0034613,GO:0034708,GO:0034709,GO:0034969,GO:0035241,GO:0035242,GO:0035246,GO:0035247,GO:0035295,GO:0035556,GO:0036094,GO:0036211,GO:0042054,GO:0042127,GO:0042325,GO:0042326,GO:0042327,GO:0042594,GO:0042770,GO:0042802,GO:0042803,GO:0042886,GO:0043009,GO:0043021,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043242,GO:0043244,GO:0043393,GO:0043408,GO:0043410,GO:0043412,GO:0043414,GO:0043565,GO:0043933,GO:0043985,GO:0044020,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0044773,GO:0044774,GO:0044783,GO:0044819,GO:0044877,GO:0045184,GO:0045595,GO:0045596,GO:0045597,GO:0045637,GO:0045638,GO:0045639,GO:0045646,GO:0045648,GO:0045652,GO:0045653,GO:0045786,GO:0045787,GO:0045892,GO:0045893,GO:0045930,GO:0045934,GO:0045935,GO:0045936,GO:0045937,GO:0045944,GO:0046658,GO:0046907,GO:0046982,GO:0046983,GO:0046984,GO:0046985,GO:0048037,GO:0048273,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048580,GO:0048583,GO:0048584,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048732,GO:0048812,GO:0048813,GO:0048856,GO:0048858,GO:0048869,GO:0050657,GO:0050658,GO:0050662,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051019,GO:0051028,GO:0051093,GO:0051094,GO:0051098,GO:0051100,GO:0051128,GO:0051129,GO:0051168,GO:0051169,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051236,GO:0051239,GO:0051240,GO:0051241,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051253,GO:0051254,GO:0051259,GO:0051260,GO:0051276,GO:0051641,GO:0051649,GO:0051716,GO:0051726,GO:0060255,GO:0060322,GO:0060341,GO:0060429,GO:0060567,GO:0061008,GO:0061062,GO:0061065,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070302,GO:0070304,GO:0070727,GO:0071156,GO:0071158,GO:0071166,GO:0071426,GO:0071427,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0072331,GO:0072395,GO:0072401,GO:0072413,GO:0072422,GO:0072431,GO:0080090,GO:0080134,GO:0080135,GO:0090068,GO:0097159,GO:0097421,GO:0098552,GO:0098562,GO:0098753,GO:0120036,GO:0120039,GO:0140096,GO:0140110,GO:1900180,GO:1900182,GO:1900744,GO:1900745,GO:1901265,GO:1901363,GO:1901564,GO:1901681,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902275,GO:1902400,GO:1902402,GO:1902403,GO:1902494,GO:1902531,GO:1902533,GO:1902679,GO:1902680,GO:1902806,GO:1902807,GO:1903047,GO:1903506,GO:1903507,GO:1903508,GO:1903706,GO:1903707,GO:1903708,GO:1903827,GO:1903829,GO:1904047,GO:1905909,GO:1905952,GO:1990234,GO:2000026,GO:2000045,GO:2000112,GO:2000113,GO:2000134,GO:2001141
Exons8
EggNOG free text desc.protein-arginine omega-N asymmetric methyltransferase activity
EggNOG OGsCOG0500@1,KOG1499@2759
Ec32 ortholog descriptionProtein arginine N-methyltransferase
Ec32 orthologEc-27_005280.1
EC2.1.1.319
Cds size978
COG Functional cat.Q
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10001.22.1prot_Ecto-sp13_S_contig10001.22.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig10001 1..4715 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462499.467753-CDS-Ecto-sp13_S_contig10001:0..571681462499.467753-CDS-Ecto-sp13_S_contig10001:0..57Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10001 1..57 +
1681462499.4770262-CDS-Ecto-sp13_S_contig10001:1038..11671681462499.4770262-CDS-Ecto-sp13_S_contig10001:1038..1167Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10001 1039..1167 +
1681462499.4865143-CDS-Ecto-sp13_S_contig10001:1616..17571681462499.4865143-CDS-Ecto-sp13_S_contig10001:1616..1757Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10001 1617..1757 +
1681462499.4952636-CDS-Ecto-sp13_S_contig10001:2112..22901681462499.4952636-CDS-Ecto-sp13_S_contig10001:2112..2290Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10001 2113..2290 +
1681462499.5093873-CDS-Ecto-sp13_S_contig10001:2764..28501681462499.5093873-CDS-Ecto-sp13_S_contig10001:2764..2850Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10001 2765..2850 +
1681462499.5191221-CDS-Ecto-sp13_S_contig10001:3370..35231681462499.5191221-CDS-Ecto-sp13_S_contig10001:3370..3523Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10001 3371..3523 +
1681462499.5287485-CDS-Ecto-sp13_S_contig10001:4075..42191681462499.5287485-CDS-Ecto-sp13_S_contig10001:4075..4219Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10001 4076..4219 +
1681462499.5384068-CDS-Ecto-sp13_S_contig10001:4625..47151681462499.5384068-CDS-Ecto-sp13_S_contig10001:4625..4715Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10001 4626..4715 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig10001.22.1

>prot_Ecto-sp13_S_contig10001.22.1 ID=prot_Ecto-sp13_S_contig10001.22.1|Name=mRNA_Ecto-sp13_S_contig10001.22.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=326bp
YYFDSYSHFGIHEEMLKDEVRTTSYMNAIEHNKHLFAGKVVMDVGCGTGI
LSMFAARAGAKQVVGIECSTIIEQARKIVAANGFADKITLIKSKCEDIAS
LEALAGVDKVDIIISEWMGYFLLYESMLDTVIYARDRWLKEGGLMLPDKA
TLFVGAIEDEQYKKEKIDFWDEVYGFDMSVIKEIALTEPLVDIVEGKAVA
TDCQAILSLDLADCKKEELQFKSEFVLTAHRNDFVHAIVAYFDCQFSQLH
KPVRFSTGPFTEYTHWKQTVFYLRQPLTICKGESIKGKVTVKPNDKNPRD
LDIALRLDHQGSVMSLHATQEYRLR*
back to top

mRNA from alignment at Ecto-sp13_S_contig10001:1..4715+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig10001.22.1 ID=mRNA_Ecto-sp13_S_contig10001.22.1|Name=mRNA_Ecto-sp13_S_contig10001.22.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4715bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10001:1..4715+ (Ectocarpus species13 EcNAP12_S_4_19m)
TACTACTTCGACTCGTACTCCCACTTCGGCATCCACGAAGAAATGCTTAA
AGACGAGGTGTGTACACGTGCATGATGCAAGCAGCACAACGCCGTTCGCA
CAAGAACAGGGTGATGGTGCTCTTGGATAAGGGGCGATCGGTTTTCTCGG
CGCGCTTATCTCAAAGAAGAGGATCCGCGGTACCAGTAGTAGTGCCTAGA
CCTTTCAAGATATTACACTTGAACCACCGGAGACTTTTCATCTAAGATGT
GATAGCGCCCCTCTCAAGTCCCCACGTGAGATCTAGGCGATGTACCAATA
GTACCCTTGTCATGCTGAACATCGCAATCAATGCCGTTGAAGGTGTTGTG
TAGGTCTTGGTATGCATGGTCGTTAACCTGCTTGTCTCGGCTTGCCTAAT
TGCTGGGCGCAATAGTGAGGTATAGGCTGCTCGGCCAAAAAAAAAATCAG
AAGCTCCCCGACAACCGTCAAAATTTGGGAGCGTTGAGCTCAGGCGTTCT
CTTATGGACTTTTTGCTCGAATTTTTTTGTTTGCAGTGTTTCGAGACGTT
GACTTGGTAGCACTCTTGCCGCTGAGTTGTTTCCCAGTAGCGTCGCTGTT
TCAGGCGTCGCGTCTGCGTGGAGAAAGGGCGACCTACTGCTCTGTGACCT
ATAAACATTTTTTTTGTGGTTGACTCCCCTCTCGTGGGTGTTGTTCTTGT
CGTGGTCGTCGTCGATCATTGGGGACCACCTACGCAGGATTTTAAGAGTA
TCTAGAAAAAGAATAGGAAGGGGGCACGAAGACCCTCATTCTAACCCCAA
AGCTCGGATTGGATTGAATACGTTACCCCATATGTTTGCTTAATCAATTT
TGCTGCGTAGCCTATTGGTCGTGGCTGATGCTGTTGTTTAGGTGCGTGCT
GATGTTGTTTTTGTTGTCGTCGTCTTCCTCATGATTGCTGTTGCTGAACT
GTTCGGTACCCACCTGCTGTTGGTGGTGGTGCTGTAGTCGTCGTTGCCAC
TGAGGTCGTCGCTGTTGATGTTGCCGTCTTCGTCGCAGGTGCGAACGACG
AGCTACATGAACGCGATCGAACACAACAAGCACCTCTTCGCCGGGAAGGT
GGTGATGGATGTTGGCTGCGGCACGGGAATCCTTTCAATGTTCGCGGCGA
GGGCGGGGGCAAAACAGGTGCGCGAGAACAAGGGCGGCATGGTAGCAAGC
TCATAATAGGGCAGTGTACTCATGACCAACGCATGCACATGGTGAGCACG
CAGCCTCTCGAGAATCACAAATAGAGACGCCCGTGAAACAGTGTGCAAAA
CCATAGGGTAACGTCTGCCTATTTTGTTGTTCACCTTGAGCTAGGCCCTT
GGGCAGATCAGCGACTCCGAGAGAACAGAGTGAGGCGAGCAAGCAACACC
CCCCCTCCCCTGCGGTACCTGGGAAAACTGCGATAGAGACGGCAAAACCG
CCGCCGTGATGACGATGGTATGTCCTTGGAGCAGGAATAGCGGATGCCCC
TTCCCCTGTTTCGGGGAAGGGCATGGCGAAAACCAACCAACTGCAAGCAG
GGAAGGTGGCACACCCTCACCCCGGTCGGCCGCGCCACCGCCGTACTATT
TTCCTTGGCGTTCCAGGTGGTTGGCATCGAGTGCTCGACGATCATCGAGC
AGGCTCGGAAGATCGTTGCGGCTAACGGGTTCGCCGACAAGATCACGCTC
ATCAAGTCCAAGTGCGAGGACATCGCCAGCCTGGAGGCCCTGGCCGGCGT
GGACAAGGTGTGTATGTGTTTTGTGTGTGTGTTTCTCTTTGATATTAGCG
TCGACCGCGTAATACGGCTGACCAGTGAAAAGACGTCAGTCTCAGTGCGG
TTGAAAATGCCTTTGAAGACCATGATCTGGGACCCCGTGAGGGGGCGTCA
TGGGCGAGGCTAAGCTACTCTCCGGATTGCGGAGAGATACGGAACTTTCG
TGTGTGTGTGTCGTCTTGGACGCCGTTTTTATCACGGCTGCTTTTGTTGT
TATTGCTGCTGCTGCTGCTGTTGGTCTTTGCTTTTGATGTCGGTTTTGCT
CTTGCGTGGATATTCTGGTTGCGATCAAAATAGACGCGAACATGCACGAC
ACCCAACGCCAGGTGGACATCATCATCTCAGAGTGGATGGGGTACTTCTT
GCTGTACGAGTCTATGCTGGACACGGTCATCTACGCCAGAGACCGGTGGC
TGAAGGAAGGGGGGTTGATGCTTCCCGACAAGGCGACGTTGTTCGTGGGG
GCGATAGAGGACGAGCAGTACAAGAAGGAGAAGATAGACTGTGAGTGTCC
CCAAGGTCTAGTCCAGGCAAGCAAGCAAGGAAGGAGGAAAACGTAATAGG
CAGAATTGCGGCGGAGATGGAAATCGAAAAAGCACGGACATCATGACGTG
CTACCGCCGTCTGTTGCGAGGTCTTGTGGACTAGAGTTGTGCACGGGGTG
GATAAAGACCTCGTCAGTAGGTACTTGAGCGGCTACGACAGTTGTTTGTG
TCTCAAATAAGAAATGTGGCTGCGCTTTGGGCTATGTTGGTGCCTAGCTC
GAAACACAGAGGTTACACATCAGGAGCGAAGCGCATACCGCCTCTTTGGC
GCGAACGACAGCTGGTAGAGCGACGCTGTACAAAGGGGATAATTTTTGGA
AACGGTAACATGGTAACGTTTTTAGTTGCTGTTCAAAACATCACGACAGA
AGTAGGTGATGCCTTAATAGTGTTGTCCGCCTTTTGTTGTTTTCATCCCA
ACCGGGACCCGCAGTTTGGGACGAAGTTTACGGTTTCGACATGAGCGTCA
TCAAAGAAATAGCCCTGACGGAACCGCTAGTGGACATTGTGGAGGGGAAG
GTACGAACGTGTTTTGGGTAGACTATTGTAGCTGGAGATGAGCGGACGTG
TGTATCTTGATCCGCCTGCCCATTACTATTTGATTTTTGCGAAAGTTTGG
TGGAACCCTCGAAATGACCCCCCACTCGGGTAATAAGTCTTAAGTCCGAT
GAACCGACCTTCCAAGTCTGCAGCAACACACACCTTCGATGGTCAACGTG
AACCTTTGTCCTGTCACAAATCGTGTTTTGACCTGCTGGAAGGATGAGAA
ATCGCTCTCCATCTTTCAACAGCCGCACTTAGCGAATGTGAAAGGTTTGG
GCAGCCGGGATACCCACTCTGGTTTGGAAAAGTTAACACAAGGATGATGA
ACCAGTTGCTGGTTCATCCTTGTGAAACGCAGCCTGGGCCGGCGAAAACC
CGGCACATCGCTCTGTCCCAGCACTGTAAGAGATGCTAGGTCAATGGTCT
AATGACTACGGCATGCGTTTATATGAGTACACCCCCCCCTATCACCCATA
TTCCCGCCGCTGTCCCGCAGGCAGTAGCCACGGATTGCCAGGCGATTCTG
TCGTTAGATCTGGCGGACTGCAAGAAGGAGGAGCTGCAGTTTAAGTCAGA
GTTTGTGCTGACGGCGCACCGTAACGACTTCGTTCACGCGATTGTGGCGT
ACTTCGATTGTCAATTCAGTCAGGTAAGTCGAGAGGGAGAGGGACGTTTT
GTGTGTGAAAGTGGGAGGCGGGACGGGCAAAACGCACGTTCCTGCCGCTG
ATTCGCCGCCGAAAAGTCTGACCGTACAAGCTGCCGAGGCGGTCGCGTGA
GTGATGCAATCATCCCCGTGAGGCTTGCTTGCTACAGTACACTCGCCGAC
CCACAATATTGGGGCGTACAAGCGCTCCTGAGAGTGGCCCTGTTTTGCTT
GCGAGCAGCGTGGGAGGGGGCGGCGAAGGCAGGGGGATGTCCAGAAGATT
TGGGTCTTGATCGTCTTGTTTTGACAAGCGAATCCGGCACCGCCGTCTAG
AAGAAGAGTGTGCGTGATCCCACCCTTCCTATCGATGCTCCTAAGTGCCA
ACAGTCTTGTGTCCCCGTCCCCCACCTACCGAAGAACCTATTGCTGCGCA
TTTCCTTTCCCGTCTTCAACACTCCAAACATTTCGCTAATTGAAGCCTGC
TGGTACATTACTTTCCAAGCGTAACTCGTCGCTTTTCTGGTCGTTGTACT
AAATGTTTCCGTTATCTCGCCCCAGTTGCACAAGCCGGTCCGATTCTCCA
CCGGGCCGTTCACCGAGTACACCCACTGGAAGCAGACGGTCTTCTACCTC
AGACAACCGCTGACCATCTGCAAGGGGGAGTCGATCAAGGGCAAGGTCAC
GGTCAAGCCGAACGACAAGGTGAGGAAGCGTGCCCGGCATCCCAAGGGGG
TCCGCGGATGGGACACATGGGCACCTGTCATAGCCTGCTGTAGGCCCAAA
GAGTCGCCCGCCGCAGCCCCGCCCAACGTCCGAACGCTGGAAGCAGGCGT
TTGTGCTCGCGCAGCACGCAGGTCTTTTGTATATCCTGGTGGAGTGTGTA
CCCTTTAGGGTGGCGAAAGATGCACGACAATGAACCCCGCTTCCGCGCGC
TTGCAGCACCCTTGTCCCACACTCCACCGATCCGGGCCGCAATCGATGGT
TTCCCTCACGCAAGCTGTTAGTTTCGATGTGGACGACATAATGTTTTGAC
GCCACCCTCTACCCTCGTGTGTGCTTCCCAATCGGTGACCCTCCCTTCCC
CCCCCCCCCGTCTCGGTTTCTGCAGAACCCCCGGGATTTGGACATCGCGT
TGAGATTGGATCACCAGGGATCCGTCATGTCGTTGCACGCCACACAAGAG
TACCGCCTGCGGTAG
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10001:1..4715+

>mRNA_Ecto-sp13_S_contig10001.22.1 ID=mRNA_Ecto-sp13_S_contig10001.22.1|Name=mRNA_Ecto-sp13_S_contig10001.22.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=978bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10001:1..4715+ (Ectocarpus species13 EcNAP12_S_4_19m)
TACTACTTCGACTCGTACTCCCACTTCGGCATCCACGAAGAAATGCTTAA
AGACGAGGTGCGAACGACGAGCTACATGAACGCGATCGAACACAACAAGC
ACCTCTTCGCCGGGAAGGTGGTGATGGATGTTGGCTGCGGCACGGGAATC
CTTTCAATGTTCGCGGCGAGGGCGGGGGCAAAACAGGTGGTTGGCATCGA
GTGCTCGACGATCATCGAGCAGGCTCGGAAGATCGTTGCGGCTAACGGGT
TCGCCGACAAGATCACGCTCATCAAGTCCAAGTGCGAGGACATCGCCAGC
CTGGAGGCCCTGGCCGGCGTGGACAAGGTGGACATCATCATCTCAGAGTG
GATGGGGTACTTCTTGCTGTACGAGTCTATGCTGGACACGGTCATCTACG
CCAGAGACCGGTGGCTGAAGGAAGGGGGGTTGATGCTTCCCGACAAGGCG
ACGTTGTTCGTGGGGGCGATAGAGGACGAGCAGTACAAGAAGGAGAAGAT
AGACTTTTGGGACGAAGTTTACGGTTTCGACATGAGCGTCATCAAAGAAA
TAGCCCTGACGGAACCGCTAGTGGACATTGTGGAGGGGAAGGCAGTAGCC
ACGGATTGCCAGGCGATTCTGTCGTTAGATCTGGCGGACTGCAAGAAGGA
GGAGCTGCAGTTTAAGTCAGAGTTTGTGCTGACGGCGCACCGTAACGACT
TCGTTCACGCGATTGTGGCGTACTTCGATTGTCAATTCAGTCAGTTGCAC
AAGCCGGTCCGATTCTCCACCGGGCCGTTCACCGAGTACACCCACTGGAA
GCAGACGGTCTTCTACCTCAGACAACCGCTGACCATCTGCAAGGGGGAGT
CGATCAAGGGCAAGGTCACGGTCAAGCCGAACGACAAGAACCCCCGGGAT
TTGGACATCGCGTTGAGATTGGATCACCAGGGATCCGTCATGTCGTTGCA
CGCCACACAAGAGTACCGCCTGCGGTAG
back to top