mRNA_Ecto-sp13_S_contig102.220.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig102.220.1 vs. uniprot
Match: D7G0V4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0V4_ECTSI) HSP 1 Score: 2172 bits (5629), Expect = 0.000e+0 Identity = 1302/1806 (72.09%), Postives = 1358/1806 (75.19%), Query Frame = 1
Query: 649 RSQVKELETEVVQSETRSPSKTKAAMAPQPNASGYGSPAATACVASTVPVVIDCFSRDRLRAPAEDVLAKFA----LPDVRSILVHQLVHHGMEHDEASIRLWSTLAPSRLMARGLMVLEKREYGSLLKGLVGRMTDVDEDVVNAAAGALGEMFSAGPATFREGEACLDAVHKQILQHYSARIQRQRSSTTRAKDTIADDEGVPRKKVFAAVADSGPLPEDTPELGASAVGTVLTPATVNSPARTNRACSSFFSPPASESEEEGTNLAQSFPATSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGDNDTEDGEELQRPKFEPIVDGVTVAPWANRYRESPGGTSTKGAAKTTGLEPAASPASTSIARRSKKKNSTALGSSGSSSRLVPSSNGSLNASTNTGEAAEKSILKNSISVDSLDTDGSGSRSSGKTAQLHDHHAQHERKHPGLVSSPTRPVLAGPAATEVSVTLGGEEELGSCAAFAEPKLGKARTGQSGEEGGTGAAALGTGGGRDREREDRNDGEATAALKPPSRPDASPTSKAGAVIQHPPDAARSETKDKHSATAERKASVPATVSTPTKTCSSSPHRLGESTTNLSLETATAGPSEAAGQ-HRYSSADKTYTTTTIATANDEDKVMGTVDSSSIFGELLRTLVEVEAAGAGRGAMAGGSGSRSPVHKSPVKIEVATAVDWGVSGRSGARRRNRVSAMENAKTMTSKETILVAGRDGGAMENSESTSTPIPXXXXFSPPTGMMQDVLLVTLRLTDDPDLKIALLALQTMHGFVLAVREHIEPHLGLIIPPLIVKLGDHKVAARHHAMLVLSAVVRVSGLTSAIPRLLLAREGLLSAGWRARESVVKLVIAGLLRWKPSSPSSVGSGALGMSAGRGVAGERLGHGRGTFMGGNGGEGLTEDAYQSGGGRPGRGEGGNAESGYGNDSKRRHLHSPSRSPAVPPRGAHGCGRSGNGGATMMSTADKERLVRDVGSLLADERPEVRRAAVEALAVVASMLGTNDIDVFRVLERGELLRSKESRRLVAARLHDPTSSLPSIGPDGIINFGAGLTTCLSPAHARRGRPVVAAAELSTSLEQEASESRRGHYGRDFNGNDHHSGGIRGGTSALRCWRSNEAGEREEVAPWKPHKVLSDSDRAGPGQEVSDVGSGGQGXXXXMEDNGGGARGGNRAGREGKXXXXXHEAQGYRRTRIASEEEERGGTESDPALSPNNRGGRGGASGSRRSVSSPVLGTNRGRTDGEKWQGGGGDHTYIPSWADRNGDESQVPCENHSYHVEDMPDRIGRGQPSRRKPSPSGLQSEGDPEAESTRGRVGGAXXXXXXXXXXXXXXXXXRGRGPEGRSXXXXXXXXXXXXXXXXXXXXXXXXXXGTDDSDEELWKGGQRNNSRGMGRTIDVGRRTGXXXXXXXXXXXXXXDEYSGRRPVVVDPDLLSTLKRGGSRNAKASRRAVSXXXXXXXXXXXXEXXXXXXXXXXXPASLSHDGXXGRSRSRPKGGSPAEPTTPVPVGRYDDMGRRSHMETTVQQPLPLSLRKRPGGVSGRRGSGGGLGTESFVTGIDVDIQDGGSGSTRHEELAESPLRGPEPEGERRRGFHNQTGVLSATRRWRERREAGERNAENESKLRPGVECDATGRNDGRQATEDRRAGEGSITGGDGHGRGKRGVQRRVRLSSPXXXXXXXXXXXXXPPSPSAALNKPDSFDYLTPEDIRPSPNPSQELQRAMASLPRDGWPEIFHTLNSVRRLATHHAPLLGSQSHLHALVRDVLGQSENLRSQV 6051
RSQ +ELETEVVQSET SPSK AAMAPQP+ASG+GS AATACVASTVPVVIDCFSRDRLRAPAEDVLAKFA LPDVRSILVH+LVHHGMEHDEASIRLWSTLAPSRLMARGLMVLEKREYGSLLKGLVGRM DVDEDVV+AAAGAL +M+SAGP T ESPGGTST GAAKT GLEPAA AS S ARRS K++ST LGSSGSSSRLVPSSNGSLN STNTGEA EKSILKNSISVDSLD DG GSRS GKTAQLHDHHAQHERKHP LV+SPTRPVLA PAATEV VTLGGEEE GSCAAFAEPKLGKARTG+SG E GTGAA LGT GGRDRER DRNDGEATAA++PPSRPDASP SKAGA I HPPDA RSE K+KHSATAERKASVPATVSTPTKTCS SP R GEST NLS +TA AGPS A Q HR+SSA KTY+ TT ANDED VM TVDSS I ELLRTLVEVEAA AGRGA GGSGSRSPV K P K E AVDW SG SG RRRNRV AME AKTM SKET+L AG DGGAM++SEST TP X FSPPTGMM+D+L+V LRLTDDPD KIALL+LQT+HGFVLAVREHI+ HL L+IPPLIVKLGDHKVAARHHAMLVLSAVVRVSGL SA PRLLLAREGLLSAGWRARESV KLVIAGLL W+P+SPSSV ALG+SAGRGVAGE+LG GRG FMGGNGGE LTED +QSG RPGRGEGG+A +DSKRRHLHSPS+SPA+P RGAHGCGR NG A +MSTADKE+LVRDVGSLLADERPEVRRAAVEALAV ASM G NDIDV RVLER EL RS ESRR VAARLHD TSSLPS+GPDGI+NFGAGLTT LSPAHARR RPV+AA ELSTS EQEA ESR GH GRD NGNDHHSGGIRGGTSALRCW SNEAGEREEV PWKPH+ +SDSDR G G+E+SDVGSGGQ ME+NGGGARGGNRAGREG+ EAQ YRRTRIAS+EEERGGTESDPALSPNNRGGRGGASG RR VSSPVLGTNRGRTDG K QGGGGDHTYIPSWAD+ GDE QVP EN SY + PDRIGRGQPS RKPSPSG+ SE D EAESTRG VGGA XX GPE S XXXX XXXXXXXXXXXXXXX GTD S+EELWKGGQ +N MGRTIDVGRRTG XXXXXXXXXXX DE SGRRPVVVDPDLLSTLKRGGSRNAKASRRAVSXXXXXXXXX E PASLSHDG GRSRSRPKGG PAEPTTPVPVGRYDDMGRRSHMETTVQQPLPLSLRKR GGVSGRRGSGGGLGTE+FVTGIDVDIQDGGSGS+RH ELAESPL GPEPEGERRRGF+NQTGV SATRR RERREAGERNAENE KLR GVECDATGRNDGR ATEDR AGEGSITGGDG GRGKRG QRRVRLSSP PPSPSAALNKPDSFDYLT EDIRPSPNPSQELQRAMASLPRDGWPEIFHTLNSVRRLATHH PLLGSQSHLHALVRDVLGQSENLRSQV
Sbjct: 2 RSQGEELETEVVQSETHSPSKITAAMAPQPSASGHGSHAATACVASTVPVVIDCFSRDRLRAPAEDVLAKFAVEEQLPDVRSILVHKLVHHGMEHDEASIRLWSTLAPSRLMARGLMVLEKREYGSLLKGLVGRMRDVDEDVVDAAAGALRKMYSAGPTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ESPGGTSTNGAAKTIGLEPAAPSASISTARRSNKESSTTLGSSGSSSRLVPSSNGSLNTSTNTGEATEKSILKNSISVDSLDIDGRGSRSRGKTAQLHDHHAQHERKHPALVASPTRPVLADPAATEVPVTLGGEEEFGSCAAFAEPKLGKARTGRSGGEDGTGAAVLGTSGGRDRERGDRNDGEATAAVQPPSRPDASPMSKAGATIPHPPDAGRSEAKEKHSATAERKASVPATVSTPTKTCSLSPPRPGESTANLSPKTAMAGPSATAEQCHRHSSAAKTYSATTTVRANDEDNVMSTVDSSPILRELLRTLVEVEAAAAGRGAKTGGSGSRSPVDKPPAKFEGVAAVDWTASGTSGVRRRNRVRAMETAKTMASKETMLAAGGDGGAMQDSESTRTPTLPPXPFSPPTGMMEDILVVMLRLTDDPDFKIALLSLQTIHGFVLAVREHIQTHLDLLIPPLIVKLGDHKVAARHHAMLVLSAVVRVSGLASATPRLLLAREGLLSAGWRARESVAKLVIAGLLFWQPTSPSSVDPDALGLSAGRGVAGEKLGRGRGAFMGGNGGERLTEDEHQSGARRPGRGEGGSAGXXXXDDSKRRHLHSPSQSPAMPLRGAHGCGRRRNGDAALMSTADKEQLVRDVGSLLADERPEVRRAAVEALAVAASMWGANDIDVLRVLERAELFRSNESRRRVAARLHDSTSSLPSVGPDGIVNFGAGLTTHLSPAHARRERPVMAAVELSTSSEQEALESRCGHDGRDVNGNDHHSGGIRGGTSALRCWTSNEAGEREEVTPWKPHQGVSDSDRGGRGKELSDVGSGGQSQGQGMENNGGGARGGNRAGREGEGRHRGREAQSYRRTRIASDEEERGGTESDPALSPNNRGGRGGASGPRRRVSSPVLGTNRGRTDGGKRQGGGGDHTYIPSWADKTGDEPQVPGENRSYDAQHKPDRIGRGQPSIRKPSPSGVDSEDDREAESTRGEVGGAGSGRHAQHGTHERRRXXXXXGPEXGSSXXXXSPEXXXXXXXXXXXXXXXPREGTDGSEEELWKGGQWDNIPRMGRTIDVGRRTGGXXXXXXXXXXXERDECSGRRPVVVDPDLLSTLKRGGSRNAKASRRAVSXXXXXXXXXEALESGAGRRASGGGPASLSHDGGEGRSRSRPKGGEPAEPTTPVPVGRYDDMGRRSHMETTVQQPLPLSLRKRAGGVSGRRGSGGGLGTETFVTGIDVDIQDGGSGSSRHGELAESPLGGPEPEGERRRGFYNQTGVSSATRRRRERREAGERNAENERKLRAGVECDATGRNDGRHATEDRPAGEGSITGGDGRGRGKRGGQRRVRLSSPPTPPLGGGRATVVPPSPSAALNKPDSFDYLTAEDIRPSPNPSQELQRAMASLPRDGWPEIFHTLNSVRRLATHHTPLLGSQSHLHALVRDVLGQSENLRSQV 1600
BLAST of mRNA_Ecto-sp13_S_contig102.220.1 vs. uniprot
Match: A0A6H5L523_9PHAE (CLASP_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L523_9PHAE) HSP 1 Score: 1980 bits (5129), Expect = 0.000e+0 Identity = 1255/1690 (74.26%), Postives = 1319/1690 (78.05%), Query Frame = 1
Query: 985 MVLEKREYGSLLKGLVGRMTDVDEDVVNAAAGALGEMFSAGPATFREGEACLDAVHKQILQHYSARIQRQRSSTTRAKDTIADDEGVPRKKVFAAVADSGPLPEDTPELGASAVGTVLTPATVNSPARTNRACSSFFSPPASESEEEGTNLAQSFPATSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGDNDTEDGEELQRPKFEPIVDGVTVAPWANRYRESPGGTSTKGAAKTTGLEPAASPASTSIARRSKKKNSTALGSSGSSSRLVPSSNGSLNASTNTGEAAEKSILKNSISVDSLDTDGSGSRSSGKTAQLHDHHAQHERKHPGLVSSPTRPVLAGPAATEVSVTLGGEEELGSCAAFAEPKLGKARTGQSGEEGGTGAAALGTGGGRDREREDRNDGEATAALKPPSRPDASPTSKAGAVIQHPPDAARSETKDKHSATAERKASVPATVSTPTKTCSSSPHRLGESTTNLSLETATAGPSEAAGQ-HRYSSADKTYTTTTIATANDEDKVMGTVDSSSIFGELLRTLVEVEAAGAGRGAMAGGSGSRSPVHKSPVKIEVATAVDWGVSGRSGARRRNRVSAMENAKTMTSKETILVAGRDGGAMENSESTSTPIPXXXXFSPPTGMMQDVLLVTLRLTDDPDLKIALLALQTMHGFVLAVREHIEPHLGLIIPPLIVKLGDHKVAARHHAMLVLSAVVRVSGLTSAIPRLLLAREGLLSAGWRARESVVKLVIAGLLRWKPSSPSSVGSGALGMSAGRGVAGERLGHGRGTFMGGNGGEGLTEDAYQSGGGRPGRGEGGNAESGYGNDSKRRHLHSPSRSPAVPPRGAHGCGRSGNGGATMMSTADKERLVRDVGSLLADERPEVRRAAVEALAVVASMLGTNDIDVFRVLERGELLRSKESRRLVAARLHDPTSSLPSIGPDGIINFGAGLTTCLSPAHARRGRPVVAAAELSTSLEQEASESRRGHYGRDFNGNDHHSGGIRGGTSALRCWRSNEAGEREEVAPWKPHKVLSDSDRAGPGQEVSDVGSGGQGXXXXMEDNGGGARGGNRAGREGKXXXXXHEAQGYRRTRIASEEEERGGTESDPALSPNNRGGRGGASGSRRSVSSPVLGTNRGRTDGEKWQGGGGDHTYIPSWADRNGDESQVPCENHSYHVEDMPDRIGRGQPSRRKPSPSGLQSEGDPEAESTRGRVGGAXXXXXXXXXXXXXXXXXRGRGPEGRSXXXXXXXXXXXXXXXXXXXXXXXXXXGTDDSDEELWKGGQRNNSRGMGRTIDVGRRTGXXXXXXXXXXXXXXDEYSGRRPVVVDPDLLSTLKRGGSRNAKASRRAVSXXXXXXXXXXXXEXXXXXXXXXXXPASLSHDGXXGRSRSRPKGGSPAEPTTPVPVGRYDDMGRRSHMETTVQQPLPLSLRKRPGGVSGRRGSGGGLGTESFVTGIDVDIQDGGSGSTRHEELAESPLRGPEPEGERRRGFHNQTGVLSATRRWRERREAGERNAENESKLRPGVECDATGRNDGRQATEDRRAGEGSITGGDGHGRGKRGVQRRVRLSSPXXXXXXXXXXXXXPPSPSAALNKPDSFDYLTPEDIRPSPNPSQELQRAMASLPRDGWPEIFHTLNSVRRLATHHAPLLGSQSHLHALVRDVLGQSENLRSQV 6051
MVL+KREYGSLLKGLVGRM DVDEDVVNAAAGALG+MFSAGPAT DT ADDEG+P KK F AVAD G LPEDTPEL ASAVGTVLT TVNSP RTNRACSSFFSP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX TGDN TEDGE LQRP FEPIVDGVTVA WA+R RESPGGTST GAAKT GL+PAA PA GSSSRLVPSS+GSLN STNT E EKSILKNSISVDSLD D SGSRSSGKTAQLH+HHAQHERKH GLVSSPTRPVLAGPAATEVSVTLGGEEE G CAA AEPKLGKA +SG E GTGA ALG GGG DRER DRNDGEATAA+KPP RPD+SP SKAGA IQHPPD+ R E K+KHSATAER+A V AT+STPTKTCS SP R G+ST NLS ++A AGP A Q HR+SSA KTY+TTT ANDED MG VDSS I ELLRTLVEVEAA AGRGA AGGSGSRS VH SP K E AVDW SG SG +RRNRV AME A TMTSKET+L AGRDGGAM++S+ST TP FSPPTGM++D+L+V LRLTDDPD KIALLALQTMHGFVL VREHI+PHL LIIPPLIVKLG HKVA RHHAMLVLSAVVRVSGL S PRLLLAREGLLSAGWRA E V KLVIAGLL WKPSSPSSVGS ALG+SAGRGV GERLGHGRGTFMGGNGGEGLTED +QSGG RPGRGEGG+A SG DSKRRHLHSPSRSPA+PP GAHG GR NGGA MMST DKE+LVRDVGSLLADERPEVRRAAVEALAV A+M GTNDIDVFRVLER +LLRS ESRRLVAARLHDPTSSLPSIGPDGI+NFGAGLTT LSPAHARRGRPVVAAAELSTSLEQEASESR G+ GRD NG DHHSGGIRGGT ALRCWRSNEAGEREEVAPW+P + +S SDR G G+EV +VGSGGQG MEDNGG ARGGNR GREG XXXXX GY+RTR ASEEE RGGT SDP LSPNNRGGRGGASG RR VSSPVLGTN GRTDGEKWQGGGGDHTYIPSWADR GDE QVP EN SYH E+MPDRIGRGQPSR KPSPSGL +E D EAE TRGRV GA RGRGPEG S GTD SD+ELWKGGQ +NSRGMG TIDVGR XXXXXXXXXXXXX D+YSGRRPVVVDPDLLSTLKRGGSRNAKA+RRAVS XXXXXXXXXXX XXXXXXXXXXXPASLSHDG X +SRSR KGG+PAEPTTPVPVGR + + V + +L+ P S GIDVDI+DGGSGS+RH ELA+SPLR PEPEGERRRGFHNQ NESK+R V+CDATGRNDG QATEDRRAGEGSITGGDG GRGKRGVQRRVRLSSP XXXXX PPSPSAAL KPDSFDYLT EDIRPSPNPSQE+QRAMASLPRDGWPEIFHTLNSVRRLATHH+PLLGSQSHLHALVRDVLGQSENLRSQV
Sbjct: 1 MVLDKREYGSLLKGLVGRMRDVDEDVVNAAAGALGKMFSAGPAT----------------------------------DTTADDEGLPGKKGFVAVADEGSLPEDTPELAASAVGTVLTAGTVNSPGRTNRACSSFFSP-------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVETGDNGTEDGEGLQRPTFEPIVDGVTVASWADRDRESPGGTSTSGAAKTIGLQPAAPPAXXXXXXXXXXXXXXXXXXXGSSSRLVPSSHGSLNTSTNTRETTEKSILKNSISVDSLDVDDSGSRSSGKTAQLHNHHAQHERKHSGLVSSPTRPVLAGPAATEVSVTLGGEEEFGCCAAAAEPKLGKAGMERSGGEDGTGAVALGAGGGCDRERGDRNDGEATAAVKPPPRPDSSPLSKAGAAIQHPPDSGRPEAKEKHSATAEREAFVSATLSTPTKTCSLSPPRPGKSTANLSPKSAIAGPLATARQGHRHSSAAKTYSTTTTVRANDEDNAMGAVDSSPILVELLRTLVEVEAAAAGRGAKAGGSGSRSSVHTSPAKFEGVAAVDWTASGTSGVQRRNRVRAMETAITMTSKETMLAAGRDGGAMQDSDSTRTPTLPPPPFSPPTGMVEDILVVMLRLTDDPDFKIALLALQTMHGFVLVVREHIKPHLDLIIPPLIVKLGHHKVATRHHAMLVLSAVVRVSGLASDTPRLLLAREGLLSAGWRASEGVAKLVIAGLLCWKPSSPSSVGSDALGVSAGRGVNGERLGHGRGTFMGGNGGEGLTEDKHQSGGRRPGRGEGGSAGSGNSKDSKRRHLHSPSRSPAMPPSGAHGYGRRENGGAAMMSTLDKEQLVRDVGSLLADERPEVRRAAVEALAVAANMWGTNDIDVFRVLERADLLRSTESRRLVAARLHDPTSSLPSIGPDGIVNFGAGLTTRLSPAHARRGRPVVAAAELSTSLEQEASESRCGNDGRDVNGYDHHSGGIRGGTFALRCWRSNEAGEREEVAPWRPLQGVSGSDRRGRGKEVRNVGSGGQGQNQGMEDNGGEARGGNRVGREGXXXXXXXXXXGYQRTRTASEEE-RGGTGSDPDLSPNNRGGRGGASGPRRRVSSPVLGTNSGRTDGEKWQGGGGDHTYIPSWADRTGDEPQVPGENRSYHAENMPDRIGRGQPSRWKPSPSGLHTEDDREAERTRGRVDGAGGGRHAQHGTRERRRERRGRGPEGGSSGPGAKPEWQHQNHNRGHRRRGSPREGTDGSDQELWKGGQWDNSRGMGHTIDVGRXXXXXXXXXXXXXXXXRDQYSGRRPVVVDPDLLSTLKRGGSRNAKANRRAVSAXXXXXXXXXXXXXXXXXXXXXXXPASLSHDGGXXQSRSRSKGGAPAEPTTPVPVGRGMQLLDNLFKPSLVVRKRQAALQYNPINAS--------------PPGIDVDIKDGGSGSSRHGELAKSPLRDPEPEGERRRGFHNQ----------------------NESKIRASVDCDATGRNDGHQATEDRRAGEGSITGGDGRGRGKRGVQRRVRLSSPPTPXXXXXRATVVPPSPSAALIKPDSFDYLTAEDIRPSPNPSQEMQRAMASLPRDGWPEIFHTLNSVRRLATHHSPLLGSQSHLHALVRDVLGQSENLRSQV 1606
BLAST of mRNA_Ecto-sp13_S_contig102.220.1 vs. uniprot
Match: A0A6H5L3P3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3P3_9PHAE) HSP 1 Score: 156 bits (395), Expect = 5.600e-41 Identity = 87/95 (91.58%), Postives = 90/95 (94.74%), Query Frame = 1
Query: 589 QVALECLSVLKDSVSWLCQTRSQVKELETEVVQSETRSPSKTKAAMAPQPNASGYGSPAATACVASTVPVVIDCFSRDRLRAPAEDVLAKFALPD 873
QVALECLSVLKDSVSWLCQTRSQV ELETEVVQS T SPSKTKAAMAPQPNASG+GS AATACVASTVPVVIDCFSRDRLRAPAEDVLAKFA+ +
Sbjct: 2 QVALECLSVLKDSVSWLCQTRSQV-ELETEVVQSGTHSPSKTKAAMAPQPNASGHGSHAATACVASTVPVVIDCFSRDRLRAPAEDVLAKFAVEE 95
BLAST of mRNA_Ecto-sp13_S_contig102.220.1 vs. uniprot
Match: A0A7S3YBP5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YBP5_HETAK) HSP 1 Score: 97.1 bits (240), Expect = 3.690e-18 Identity = 47/70 (67.14%), Postives = 54/70 (77.14%), Query Frame = 1
Query: 5842 EDIRPSPNPSQELQRAMASLPRDGWPEIFHTLNSVRRLATHHAPLLGSQSHLHALVRDVLGQSENLRSQV 6051
+DIRPSPNPS ELQR + +LP WPE+FHTLN+VRRL HH LL + HLH +VRDVL QSENLRS V
Sbjct: 14 DDIRPSPNPSHELQRTLRALPNGEWPEVFHTLNAVRRLGLHHGALL--EPHLHGVVRDVLKQSENLRSAV 81
BLAST of mRNA_Ecto-sp13_S_contig102.220.1 vs. uniprot
Match: A0A835ZHW3_9STRA (TOG domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHW3_9STRA) HSP 1 Score: 102 bits (254), Expect = 8.510e-18 Identity = 54/86 (62.79%), Postives = 64/86 (74.42%), Query Frame = 1
Query: 5791 SPSAALNKPDSFDYLTPEDIRPSPNPSQELQRAMASLPRDGWPEIFHTLNSVRRLATHHAPLLGSQSHLHALVRDVLGQSENLRSQ 6048
+P AAL PD+FDYL +D+RPSPN EL RA+ASL RD WPEIFHTLN+ RRLA HHAPL+ ++H L RDVL +NLRSQ
Sbjct: 1234 TPGAALC-PDAFDYLGWDDLRPSPNAKAELARALASLARDDWPEIFHTLNAARRLARHHAPLV--EAHARELTRDVLRHVDNLRSQ 1316
BLAST of mRNA_Ecto-sp13_S_contig102.220.1 vs. uniprot
Match: A0A4D9CTV7_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CTV7_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 8.590e-7 Identity = 37/91 (40.66%), Postives = 52/91 (57.14%), Query Frame = 1
Query: 5785 PPSPSAALNKPDSFDYLTPEDIRPSPNPSQELQRAMASLPRDGWPEIFHTLNSVRRLATHHAPLLGSQS--HLHALVRDVLGQSENLRSQV 6051
P PS+A + YLT +RP P+P+Q L + SLP WPE FH+L ++RRLA HH +L + S L L+ ++ +NLRS V
Sbjct: 460 PVGPSSAPTHTPTIQYLTIAQLRPLPDPNQSLTHLVTSLPTADWPENFHSLTTIRRLALHHPDILFALSPPSLRLLLVELFRLIDNLRSAV 550 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig102.220.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig102.220.1 >prot_Ecto-sp13_S_contig102.220.1 ID=prot_Ecto-sp13_S_contig102.220.1|Name=mRNA_Ecto-sp13_S_contig102.220.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=2017bp MSATSAATAASGHGGSRMSNNDSNTYSSGGVQENREREPSGTMQLLDRLGback to top mRNA from alignment at Ecto-sp13_S_contig102:11..13083- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig102.220.1 ID=mRNA_Ecto-sp13_S_contig102.220.1|Name=mRNA_Ecto-sp13_S_contig102.220.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=13073bp|location=Sequence derived from alignment at Ecto-sp13_S_contig102:11..13083- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig102:11..13083- >mRNA_Ecto-sp13_S_contig102.220.1 ID=mRNA_Ecto-sp13_S_contig102.220.1|Name=mRNA_Ecto-sp13_S_contig102.220.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=6051bp|location=Sequence derived from alignment at Ecto-sp13_S_contig102:11..13083- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |