prot_Ecto-sp13_S_contig12647.2190.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12647.2190.1
Unique Nameprot_Ecto-sp13_S_contig12647.2190.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length809
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12647.2190.1 vs. uniprot
Match: A0A6H5JWU4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWU4_9PHAE)

HSP 1 Score: 1070 bits (2766), Expect = 0.000e+0
Identity = 548/591 (92.72%), Postives = 565/591 (95.60%), Query Frame = 0 
Query:    1 SQIKGKDKALLKEIAALEEDETEQIMGDFGKGAGVLPNSWRQDPEGLKRMERRRKELIAENAADRRKVVCPWRPGGKHIAQEPWKPFIPRDHRPPVRSASEGKAETHGGSLGVTSTAQEGRRGVPIHEKGNGKKGAERRPRTAPAHRRKGFMDAISPRARRILAAQAPGTPLHSVFSTYSNDPFPLETRRRHSAQSTPARTEYSG-RPWPT---EPCTDTFFQTSGRIGLGTRQRAWAETSCSPTSSQTIRGGFAARPHSATAEISKKLQTPPRRPATACGTRVPRESTDNAVAASNVSSTNQAREHEQDHRSDEQSRDLHVQNGPGVTVLWARLCSPSSDLVYKRSVWPEASAASRPTRRRGKPRKTSATASVNATTEAEGEHEWDVTPGNPSTGPGPIDAGSSGGGKPKLPRGTTDTGGPLEDMENSLYASSSQRVNHRKRVFRGYSDRSRRERTWDPGSEFYAEGASKHSMVRPGPCTGKINVNRRGGKGNPRQEDDTTKRKHRRDKRHQSRLSGNDDPVDMDWEKVDIARLINGFRETERVLDGKFFAVVTDDESPVHLGECFQEAQELVESASVLLGCPENERERF 587
            SQ+K KDKALLKEIAALEEDETEQIMG+FGKGAGVLPNSWRQDPEGL RMERRRKELIAENAADRRKVVCPWRPGGKHIAQEPWKPFIPRDHRPPVRSASEGKAETHGGSLGV+S AQEGRR VPIHEKGNGKK AERRPRTAPAHRRKGFMDAISPRARRILAAQAPGTPLHSVFSTYSNDPFPLETR+R SAQSTPARTEYSG RP PT   EPCTDT FQTSGRIGLGT+QRAW E SCSPTSSQT+RGGF ARPHSA A+ISKKL+TPPRRPATACGTRVPRESTDNAVAASNVSSTNQAREHEQDHRSDEQSRDLHVQ+GPGVTVLWARLCSPSSDLVYKRSVWPEA AASRPTRRRGKPRKTSATA VN TT AEGEHEWD TPG+PSTGPGPI AGSSGGGKPKLPRGTTDTGGPLEDMENSLYASSSQRVNHRKR+FRGYSDRSRRERTWDPGSEFYAEGASKHSMVRP PCTG+IN NRRGG+GNPRQEDDTTKRKHRRDKRHQSR+SGNDDPVDMDWEKVDIARLING +E E+VLDGKFFAVVTDDESPVHLGECFQEAQELVESASVLLGCPENERER+
Sbjct:  491 SQMKSKDKALLKEIAALEEDETEQIMGNFGKGAGVLPNSWRQDPEGLNRMERRRKELIAENAADRRKVVCPWRPGGKHIAQEPWKPFIPRDHRPPVRSASEGKAETHGGSLGVSSAAQEGRRSVPIHEKGNGKKEAERRPRTAPAHRRKGFMDAISPRARRILAAQAPGTPLHSVFSTYSNDPFPLETRQRPSAQSTPARTEYSGNRPSPTLTTEPCTDTLFQTSGRIGLGTQQRAWVEISCSPTSSQTLRGGFVARPHSAAAKISKKLRTPPRRPATACGTRVPRESTDNAVAASNVSSTNQAREHEQDHRSDEQSRDLHVQSGPGVTVLWARLCSPSSDLVYKRSVWPEAPAASRPTRRRGKPRKTSATAPVNGTTVAEGEHEWDATPGDPSTGPGPIVAGSSGGGKPKLPRGTTDTGGPLEDMENSLYASSSQRVNHRKRIFRGYSDRSRRERTWDPGSEFYAEGASKHSMVRPSPCTGRINWNRRGGRGNPRQEDDTTKRKHRRDKRHQSRISGNDDPVDMDWEKVDIARLINGSKEIEKVLDGKFFAVVTDDESPVHLGECFQEAQELVESASVLLGCPENERERY 1081
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BLAST of mRNA_Ecto-sp13_S_contig12647.2190.1 vs. uniprot
Match: D7G599_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G599_ECTSI)

HSP 1 Score: 947 bits (2447), Expect = 0.000e+0
Identity = 488/532 (91.73%), Postives = 500/532 (93.98%), Query Frame = 0 
Query:    1 SQIKGKDKALLKEIAALEEDETEQIMGDFGKGAGVLPNSWRQDPEGLKRMERRRKELIAENAADRRKVVCPWRPGGKHIAQEPWKPFIPRDHRPPVRSASEGKAETHGGSLGVTSTAQEGRRGVPIHEKGNGKKGAERRPRTAPAHRRKGFMDAISPRARRILAAQAPGTPLHSVFSTYSNDPFPLETRRRHSAQSTPARTEYSG-RPWPT---EPCTDTFFQTSGRIGLGTRQRAWAETSCSPTSSQTIRGGFAARPHSATAEISKKLQTPPRRPATACGTRVPRESTDNAVAASNVSSTNQAREHEQDHRSDEQSRDLHVQNGPGVTVLWARLCSPSSDLVYKRSVWPEASAASRPTRRRGKPRKTSATASVNATTEAEGEHEWDVTPGNPSTGPGPIDAGSSGGGKPKLPRGTTDTGGPLEDMENSLYASSSQRVNHRKRVFRGYSDRSRRERTWDPGSEFYAEGASKHSMVRPGPCTGKINVNRRGGKGNPRQEDDTTKRKHRRDKRHQSRLSGNDDPVDMDWEKVDI 528
            +QIKGKDKALLKEIAALEEDE EQ+MGDFGKG  VLPNSWRQDPEGLKRMERRRKELIAENAADRRKVVCPWRPGGKHIAQEPWKPFIPRDHRPPVRSASEGKAETHGGSLG TS AQEGRRGVPIHEKGNGKKGAERRPRTAPAHRRKGFMDAISPRARRILAAQAPGTPLHSVFSTYSNDPFPLETR+R SAQSTPARTEYS  RPWPT   EP TDT FQTSGR+GLGT+QRAWAE SCSPTSSQT+RG F ARP SA AEISK LQTPPRRPATACGTRVPREST NAVAASNVSS NQAREHEQ HRSDEQSRDLHVQNGPGVTVLWARLCSPSSDLVYKRSVWPEASAASR TR RGKPRKTSATA VNATTEAEGEHEWD TPG+PSTGPGPIDAG SGGGKPKLPRGTTDTGGPLEDMENSLYASSSQRVNHRKRVFRGYSDRSRRERTWDPGSEFYAEGASKHSMVRP PCTG+IN NR GGKG+PRQEDDTTKRKHRRDKRHQSR+SG+D PVDMDWEKV +
Sbjct:  543 AQIKGKDKALLKEIAALEEDEAEQMMGDFGKGTEVLPNSWRQDPEGLKRMERRRKELIAENAADRRKVVCPWRPGGKHIAQEPWKPFIPRDHRPPVRSASEGKAETHGGSLGATSAAQEGRRGVPIHEKGNGKKGAERRPRTAPAHRRKGFMDAISPRARRILAAQAPGTPLHSVFSTYSNDPFPLETRQRPSAQSTPARTEYSANRPWPTPTTEPRTDTLFQTSGRVGLGTQQRAWAEISCSPTSSQTLRGDFVARPRSAAAEISKNLQTPPRRPATACGTRVPRESTANAVAASNVSSANQAREHEQGHRSDEQSRDLHVQNGPGVTVLWARLCSPSSDLVYKRSVWPEASAASRQTRPRGKPRKTSATAPVNATTEAEGEHEWDATPGDPSTGPGPIDAGDSGGGKPKLPRGTTDTGGPLEDMENSLYASSSQRVNHRKRVFRGYSDRSRRERTWDPGSEFYAEGASKHSMVRPSPCTGRINGNRIGGKGDPRQEDDTTKRKHRRDKRHQSRISGDDVPVDMDWEKVGV 1074
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BLAST of mRNA_Ecto-sp13_S_contig12647.2190.1 vs. uniprot
Match: A0A835YZN9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZN9_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 2.060e-11
Identity = 34/75 (45.33%), Postives = 47/75 (62.67%), Query Frame = 0 
Query:   21 ETEQIMGDFGKGAGVLPNSWRQDPEGLKRMERRRKELIAENAADRRKVVCPWRPGGKHIAQEPWKPFIPRDHRPP 95
            + + IM    +    LP  WR+D + LK M+ R+KEL  +      K+VCPWRPGG+HIA+ PW+PF P+  RPP
Sbjct:  578 QADTIMAQANRDVDHLPGGWREDRQNLKAMKARQKELRRDKEDVAEKIVCPWRPGGQHIAKGPWEPFYPKRRRPP 652
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12647.2190.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JWU4_9PHAE0.000e+092.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G599_ECTSI0.000e+091.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YZN9_9STRA2.060e-1145.33Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 47..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12647contigEcto-sp13_S_contig12647:3..3933 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12647.2190.1mRNA_Ecto-sp13_S_contig12647.2190.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12647 3..3933 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12647.2190.1 ID=prot_Ecto-sp13_S_contig12647.2190.1|Name=mRNA_Ecto-sp13_S_contig12647.2190.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=809bp
SQIKGKDKALLKEIAALEEDETEQIMGDFGKGAGVLPNSWRQDPEGLKRM
ERRRKELIAENAADRRKVVCPWRPGGKHIAQEPWKPFIPRDHRPPVRSAS
EGKAETHGGSLGVTSTAQEGRRGVPIHEKGNGKKGAERRPRTAPAHRRKG
FMDAISPRARRILAAQAPGTPLHSVFSTYSNDPFPLETRRRHSAQSTPAR
TEYSGRPWPTEPCTDTFFQTSGRIGLGTRQRAWAETSCSPTSSQTIRGGF
AARPHSATAEISKKLQTPPRRPATACGTRVPRESTDNAVAASNVSSTNQA
REHEQDHRSDEQSRDLHVQNGPGVTVLWARLCSPSSDLVYKRSVWPEASA
ASRPTRRRGKPRKTSATASVNATTEAEGEHEWDVTPGNPSTGPGPIDAGS
SGGGKPKLPRGTTDTGGPLEDMENSLYASSSQRVNHRKRVFRGYSDRSRR
ERTWDPGSEFYAEGASKHSMVRPGPCTGKINVNRRGGKGNPRQEDDTTKR
KHRRDKRHQSRLSGNDDPVDMDWEKVDIARLINGFRETERVLDGKFFAVV
TDDESPVHLGECFQEAQELVESASVLLGCPENERERFREQIRGDFTIGHY
VATVSRLNLLWTTGCGVVEIVSMIHRRRSLLKVFCSEIDELPAVECASVF
TEEAQGNTRVAPPIPVSAFSREHCVRQYETRLELAEYTIAIAESIKLWTS
VIPWRVRVLFGGEPVLTSLSAEEEALPWPPDPDQPGRGFAPDGALTMPNP
GQKVETHHQHRPPCDGSDDKTTCSGVDGCAPEEEKESNLGVLQDAEKGVE
DVVVQEQC*
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