prot_Ecto-sp13_S_contig1264.2186.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1264.2186.1
Unique Nameprot_Ecto-sp13_S_contig1264.2186.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length1177
Homology
BLAST of mRNA_Ecto-sp13_S_contig1264.2186.1 vs. uniprot
Match: D7G172_ECTSI (TPX2_importin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G172_ECTSI)

HSP 1 Score: 1073 bits (2775), Expect = 0.000e+0
Identity = 585/619 (94.51%), Postives = 591/619 (95.48%), Query Frame = 0
Query:  558 MQEQLKQMTRRNQVVMERSRRTAYSGNVRSSKPLTVPESPAMKTVGRLGGKVYAAVGPKDQVGFSPTHPAKNDPLSKDNLAQLAAQPKGPTVPAPFHLSKSNRPSSRDGGSAPGTPRSKEDTLTFRESLARIENKTPDRFRTRPVGEQPRLQPVARVEAKPTLPKSPKFRTEARAAGYSKAKAHFPSREEREEAELAEMKKARRKNKILLCHHQFKALPYNADGFGVGGEQGVFRPQHSDKQLTQPTPFHLSSDDRASKRASSPHRSRDEEELSKKFKARPMPGGRSSSVGRVRPGANVGAELKPRELTLASSPTFATKRRSALRSNSVGGGGTGGVMLTSEELELEKAAANKFRARPMPDYSRLSQSRRQSVAAPEVPPAPTEARPFNLRSDARGKAKQALLAKRMLDQRRQEDAAARVRARPLPAPSNGFCPQPSDRPLTETSEFCLSSQARHEKAAQEFQDRVRKEEERARRAAEVIALPLPAATFEPELYPERTEVSLTQPVEMVLHSSARAEGRAKWDEENQARQAHDERVKREQXXXXXXXXXXSISELRRRSHDDGGMSFKAKPIKWNSAPPEVAQLSTAPLTTPVTPNLRTKRRAMNNAAEPREPAPAPIA 1176
            MQEQLKQMTRRNQVVMERSRRTAYSGNVRSSKPLTVPESPAMKTVGRLGGKVYAAVGPKDQVGFSPTHPAKNDPLSKDNLAQLAAQPKGPTVPAPF LSKSNRPSSRDGGSAPGTPRSKEDTLTFRESLARIENKTPDRFRTRPVGEQPRLQP+ARVEAKPTLPKSPKFRTEARAAGYSK   HFPSREEREEAELAEMKK           HQFKALPYNADGFGVGGEQGVFRPQHSDKQLTQPTPFHLSSDDRAS+RA SPHRSRDEEELSKKFKARPMPGGRSSSVGRVRPGANVGAELKPRELTLASSPT ATKRRSALRSNSVGGGGTGG+MLTSEELELEKAAANKFRARPMPDYSRLSQSRRQS AAPEVPPAPTE RPFNLRSD RGKAKQALLAKRMLDQRRQEDAAARVRARPLPAPSNGFCPQPSDR LTETSEFCLSSQARHEKAAQEFQDRVRKEEERARRA EVIALPLPAATFEPELYPERTEVSLTQP+E VLHSSARAEGRAKWDEE+QARQAH+ERVKRE XXXXXXX   SISELRRRSH DGGMSFKAKPIKWNSAPPEVAQLSTAPLTTPVTPNLRTKRRAMNNAAEPREPAPAPIA
Sbjct:    1 MQEQLKQMTRRNQVVMERSRRTAYSGNVRSSKPLTVPESPAMKTVGRLGGKVYAAVGPKDQVGFSPTHPAKNDPLSKDNLAQLAAQPKGPTVPAPFQLSKSNRPSSRDGGSAPGTPRSKEDTLTFRESLARIENKTPDRFRTRPVGEQPRLQPIARVEAKPTLPKSPKFRTEARAAGYSKG--HFPSREEREEAELAEMKK-----------HQFKALPYNADGFGVGGEQGVFRPQHSDKQLTQPTPFHLSSDDRASRRAPSPHRSRDEEELSKKFKARPMPGGRSSSVGRVRPGANVGAELKPRELTLASSPTLATKRRSALRSNSVGGGGTGGIMLTSEELELEKAAANKFRARPMPDYSRLSQSRRQSAAAPEVPPAPTEPRPFNLRSDTRGKAKQALLAKRMLDQRRQEDAAARVRARPLPAPSNGFCPQPSDRALTETSEFCLSSQARHEKAAQEFQDRVRKEEERARRATEVIALPLPAATFEPELYPERTEVSLTQPIERVLHSSARAEGRAKWDEESQARQAHEERVKREXXXXXXXXERRSISELRRRSHADGGMSFKAKPIKWNSAPPEVAQLSTAPLTTPVTPNLRTKRRAMNNAAEPREPAPAPIA 606          
BLAST of mRNA_Ecto-sp13_S_contig1264.2186.1 vs. uniprot
Match: D7G171_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G171_ECTSI)

HSP 1 Score: 182 bits (463), Expect = 2.180e-43
Identity = 235/318 (73.90%), Postives = 239/318 (75.16%), Query Frame = 0
Query:  126 EALNKAPETAEAAATGMXXXXXXXXXXXXXXXXXXXXXXSGGDKRNGDDARKGNAPAAVPSEQAVGGGAEAKLGGGG---MKNARVSISRVAVPASVSARRGSSSSSSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSNSGGXXXXXXXXXSALRPPSPSATQRRHSMAFGSRVDGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAVPVKRASSRGRDRVGRERASVGGVSRGRHEGTSAGGAASXXXXXXXXXXXXXXXXXXXXXXXXXXA-VDPSSRLLAPTKLSQGRA 439
            EALNKAPETAEAAATG                       SGGDKRNGDDARKG APAAVPS+QA                MKNARVSISRVAVPA+VSARRGSS SSSL     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            SS+S  XXXXXXX   AL   SPSATQRRHSMAFGSRVDGSG    XXXXXXXXXXXXXXXXXXXXXXXXXXXX  VPVKRASSRGRDR+GRERASVGGVSRGR  GTSAGGAASXXXXXXXXXXXXXXXXXXXXXX    A VDPSSRLLAPTKLSQGRA
Sbjct:  586 EALNKAPETAEAAATGTEKKAAGVEREGGNEEPEVAGGESGGDKRNGDDARKGKAPAAVPSKQAXXXXXXXXXXXXXXXXMKNARVSISRVAVPAAVSARRGSSGSSSLRPPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR-----------SSSSSSXXXXXXXRGGALXXXSPSATQRRHSMAFGSRVDGSGSAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPVKRASSRGRDRLGRERASVGGVSRGRDAGTSAGGAASXXXXXXXXXXXXXXXXXXXXXXPVVVAAVDPSSRLLAPTKLSQGRA 892          
BLAST of mRNA_Ecto-sp13_S_contig1264.2186.1 vs. uniprot
Match: A0A6H5JAS4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAS4_9PHAE)

HSP 1 Score: 121 bits (303), Expect = 3.930e-24
Identity = 181/238 (76.05%), Postives = 184/238 (77.31%), Query Frame = 0
Query:  203 MKNARVSISRVAVPASVSARRGSSSSSSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSNSGGXXXXXXXXXSALRPPSPSATQRRHSMAFGSRVDGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAV-PVKRASSRGRDRVGRERASVGGVSRGRHEGTSAGGAASXXXXXXXXXXXXXXXXXXXXXXXXXXAVDPSSRLLAPTKLSQGRA 439
            MKNARV+ISRVAVPASVSARRGSSS               XXXXX           XXXXXXXXXXXXXXXXXXXX SS+S GXXXXXXXXXSALRPPSPSATQRRHSMAFGSR+DGSG    XXXXXXXXXXXXXXXXXXXXXXXXXXXX    PVKRASSRGRDRVGRER SVGGVSRGR   TSAGG   XXXXXXXXXXXXXXXX          AVDPSSRLLA TKLSQGRA
Sbjct:  640 MKNARVTISRVAVPASVSARRGSSS---------------XXXXXSSKLRPPSPSRXXXXXXXXXXXXXXXXXXXXXSSSSSGXXXXXXXXXSALRPPSPSATQRRHSMAFGSRIDGSGSAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVKRASSRGRDRVGRERPSVGGVSRGRGADTSAGGXXXXXXXXXXXXXXXXXXXVVVA------AVDPSSRLLAATKLSQGRA 856          
BLAST of mRNA_Ecto-sp13_S_contig1264.2186.1 vs. uniprot
Match: A0A7S3HUB6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HUB6_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 6.090e-7
Identity = 60/183 (32.79%), Postives = 89/183 (48.63%), Query Frame = 0
Query:  952 RGKAKQALLAKRMLDQRRQEDAAARVRARPLPAPSNGFCPQPS----DRPLTETSEFCLSSQARHEKAAQEFQDRVRKEEERARRAAEVIALPLPAATFEPEL-YPERTEVSLTQPVEMVLHSSARAEGRAKWDEENQARQAHDERVKREQXXXXXXXXXXSISELRRRSHDDGGMSFKAKPI 1129
            RG+  +  + K++  ++    AA  V+A P+P   N    QP       PLTE+  F L S ARH  A   FQ  V    E A +A    A P+PA T++P+L + E  + +   P+ + L S  RA  R  +D+    + A  E ++              I ELRR+S ++GG+ FKAKPI
Sbjct:    2 RGEFHKVQMQKQLAQEQEALAAAREVKAHPMPD-FNKPVFQPDLVTHKAPLTESKPFQLRSTARHSDAVAAFQQEVTHIAE-AEKAVAFHARPVPATTYKPDLEFTEPVDHTPVVPLPVTLESDRRALKRQAFDQVMGQKMAQLEVMQETLAKQKLEQENSRIKELRRKSVEEGGLMFKAKPI 182          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1264.2186.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G172_ECTSI0.000e+094.51TPX2_importin domain-containing protein n=1 Tax=Ec... [more]
D7G171_ECTSI2.180e-4373.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JAS4_9PHAE3.930e-2476.05Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A7S3HUB6_9STRA6.090e-732.79Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 555..575
NoneNo IPR availableCOILSCoilCoilcoord: 1009..1036
NoneNo IPR availableCOILSCoilCoilcoord: 1086..1115
NoneNo IPR availableCOILSCoilCoilcoord: 482..513
NoneNo IPR availablePANTHERPTHR14326:SF9TARGETING PROTEIN FOR XKLP2coord: 997..1160
coord: 858..983
IPR009675TPX2PANTHERPTHR14326TARGETING PROTEIN FOR XKLP2coord: 997..1160
coord: 858..983

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1264contigEcto-sp13_S_contig1264:3787..18018 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1264.2186.1mRNA_Ecto-sp13_S_contig1264.2186.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1264 3134..18159 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1264.2186.1 ID=prot_Ecto-sp13_S_contig1264.2186.1|Name=mRNA_Ecto-sp13_S_contig1264.2186.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1177bp
MTLPTLSKVEKTLPGQQEQQQQPAPPAAAVDTDGGVDGAAAPGASGGTGG
SVDADSSVILDEMLVAATGGGLGCASRAGMKAPPPGAGAGPTTAASDNGK
GGAAVVVSAVEKEAMALAAACVAQQEALNKAPETAEAAATGMEKKAAGVE
REGGNEEPEVAGGESGGDKRNGDDARKGNAPAAVPSEQAVGGGAEAKLGG
GGMKNARVSISRVAVPASVSARRGSSSSSSLRPPSPSRSNLRPPSPARGS
VRPPSPARGSVRPPSPARGSVRPPSPSRSSSNSGGVRPPSPSRGSALRPP
SPSATQRRHSMAFGSRVDGSGSAAAAAAAAAKRTAAVEAMKAKAAAKANA
VPVVAVPVKRASSRGRDRVGRERASVGGVSRGRHEGTSAGGAASAAAPAA
AAPAPAEAAPAPAPTPVAVAAVDPSSRLLAPTKLSQGRARPRSASPSVSS
ARGRASTGGFGGPGGSGPGVNRRVSTAGPTPLQQQQQKLQQKQQEQQQQQ
QQQQQQQQQKQARPRSASTGRRALTMPKTPNFRTSSRAKTDKPQETSEEA
EFRKQQAMQEQLKQMTRRNQVVMERSRRTAYSGNVRSSKPLTVPESPAMK
TVGRLGGKVYAAVGPKDQVGFSPTHPAKNDPLSKDNLAQLAAQPKGPTVP
APFHLSKSNRPSSRDGGSAPGTPRSKEDTLTFRESLARIENKTPDRFRTR
PVGEQPRLQPVARVEAKPTLPKSPKFRTEARAAGYSKAKAHFPSREEREE
AELAEMKKARRKNKILLCHHQFKALPYNADGFGVGGEQGVFRPQHSDKQL
TQPTPFHLSSDDRASKRASSPHRSRDEEELSKKFKARPMPGGRSSSVGRV
RPGANVGAELKPRELTLASSPTFATKRRSALRSNSVGGGGTGGVMLTSEE
LELEKAAANKFRARPMPDYSRLSQSRRQSVAAPEVPPAPTEARPFNLRSD
ARGKAKQALLAKRMLDQRRQEDAAARVRARPLPAPSNGFCPQPSDRPLTE
TSEFCLSSQARHEKAAQEFQDRVRKEEERARRAAEVIALPLPAATFEPEL
YPERTEVSLTQPVEMVLHSSARAEGRAKWDEENQARQAHDERVKREQEEA
AAAAERRSISELRRRSHDDGGMSFKAKPIKWNSAPPEVAQLSTAPLTTPV
TPNLRTKRRAMNNAAEPREPAPAPIA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009675TPX2_fam