prot_Ecto-sp13_S_contig1264.2185.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1264.2185.1
Unique Nameprot_Ecto-sp13_S_contig1264.2185.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length68
Homology
BLAST of mRNA_Ecto-sp13_S_contig1264.2185.1 vs. uniprot
Match: A0A6H5JCP7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCP7_9PHAE)

HSP 1 Score: 126 bits (317), Expect = 2.020e-34
Identity = 66/67 (98.51%), Postives = 66/67 (98.51%), Query Frame = 0
Query:    1 MESRTVAVADDDVEVLDTDEAGTDAFAAYFAEANKACDREVVFDAELGLAVESLPGGASTQSLWKLV 67
            MESRTVAV DDDVEVLDTDEAGTDAFAAYFAEANKACDREVVFDAELGLAVESLPGGASTQSLWKLV
Sbjct:  208 MESRTVAVTDDDVEVLDTDEAGTDAFAAYFAEANKACDREVVFDAELGLAVESLPGGASTQSLWKLV 274          
BLAST of mRNA_Ecto-sp13_S_contig1264.2185.1 vs. uniprot
Match: D7G173_ECTSI (Bardet-Biedl syndrome 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G173_ECTSI)

HSP 1 Score: 126 bits (317), Expect = 8.970e-34
Identity = 66/67 (98.51%), Postives = 66/67 (98.51%), Query Frame = 0
Query:    1 MESRTVAVADDDVEVLDTDEAGTDAFAAYFAEANKACDREVVFDAELGLAVESLPGGASTQSLWKLV 67
            MESRTVAV DDDVEVLDTDEAGTDAFAAYFAEANKACDREVVFDAELGLAVESLPGGASTQSLWKLV
Sbjct:  279 MESRTVAVTDDDVEVLDTDEAGTDAFAAYFAEANKACDREVVFDAELGLAVESLPGGASTQSLWKLV 345          
BLAST of mRNA_Ecto-sp13_S_contig1264.2185.1 vs. uniprot
Match: A0A835YZA3_9STRA (Bardet-Biedl syndrome 5 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZA3_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 1.180e-14
Identity = 36/67 (53.73%), Postives = 51/67 (76.12%), Query Frame = 0
Query:    1 MESRTVAVADDDVEVLDTDEAGTDAFAAYFAEANKACDREVVFDAELGLAVESLPGGASTQSLWKLV 67
            +E R +A  +DDV+++DTD   ++A A Y+A+ANKA DR +VFD  L LA+ESLP GA+ QSLW++V
Sbjct:  277 LEKRRIAPREDDVQIVDTDSKASNASAVYYADANKASDRSIVFDPTLCLAIESLPSGATVQSLWEIV 343          
BLAST of mRNA_Ecto-sp13_S_contig1264.2185.1 vs. uniprot
Match: A0A5J4XPR6_9CHLO (Bardet-Biedl syndrome 5 n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XPR6_9CHLO)

HSP 1 Score: 64.3 bits (155), Expect = 1.870e-10
Identity = 32/67 (47.76%), Postives = 48/67 (71.64%), Query Frame = 0
Query:    1 MESRTVAVADDDVEVLDTDEAGTDAFAAYFAEANKACDREVVFDAELGLAVESLPGGASTQSLWKLV 67
            ++  T++   DDV+++D D   +DAFA Y+AE +K  DREV+F+ ELGLA+E+LP G + Q LW +V
Sbjct:  296 LKDMTLSRPQDDVQIVDADT--SDAFATYYAEDSKQADREVIFNPELGLAMEALPAGLTLQELWSVV 360          
BLAST of mRNA_Ecto-sp13_S_contig1264.2185.1 vs. uniprot
Match: B3RQQ8_TRIAD (Uncharacterized protein n=2 Tax=Trichoplax TaxID=10227 RepID=B3RQQ8_TRIAD)

HSP 1 Score: 63.5 bits (153), Expect = 3.420e-10
Identity = 35/67 (52.24%), Postives = 48/67 (71.64%), Query Frame = 0
Query:    1 MESRTVAVADDDVEVLDTDEAGTDAFAAYFAEANKACDREVVFDAELGLAVESLPGGASTQSLWKLV 67
            ++  TV V  DDVE+++ +EA TDAFAAYFA+ NK  DR  V++ +LGLAVE L  G +  SLW++V
Sbjct:  278 LDELTVDVVQDDVEIVNEEEA-TDAFAAYFADGNKQSDRPPVYNEQLGLAVEKLMDGYTLASLWEVV 343          
BLAST of mRNA_Ecto-sp13_S_contig1264.2185.1 vs. uniprot
Match: F0YFS0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFS0_AURAN)

HSP 1 Score: 59.7 bits (143), Expect = 8.330e-9
Identity = 31/62 (50.00%), Postives = 44/62 (70.97%), Query Frame = 0
Query:   10 DDDVEVLDTDEAGTDA-----FAAYFAEANKACDREVVFDAELGLAVESLPGGASTQSLWKL 66
            +DDVE+++ ++ G  A      AAY+AE  K  DREVVFD  LGLAVE++P G +T+SLW++
Sbjct:  302 EDDVEIVEGEDGGGGATHDGVVAAYYAEPGKKADREVVFDEHLGLAVEAMPPGVTTKSLWEI 363          
BLAST of mRNA_Ecto-sp13_S_contig1264.2185.1 vs. uniprot
Match: A0A485LA64_9STRA (Aste57867_17753 protein n=9 Tax=Aphanomyces TaxID=100860 RepID=A0A485LA64_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 5.420e-8
Identity = 29/54 (53.70%), Postives = 37/54 (68.52%), Query Frame = 0
Query:   11 DDVEVLDTDEAGTDAFAAYFAEANKACDREVVFDAELGLAVESLPGGASTQSLW 64
            DDVE+++   +  DAFAAY+A ANK  DR  VF  ++GLA+ESLP G S   LW
Sbjct:  294 DDVEIVEDQSSSIDAFAAYYAVANKNQDRAPVFSKDIGLAIESLPEGISLGDLW 347          
BLAST of mRNA_Ecto-sp13_S_contig1264.2185.1 vs. uniprot
Match: A0A061RW20_9CHLO (Bardet-Biedl syndrome 5 protein n=3 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RW20_9CHLO)

HSP 1 Score: 53.5 bits (127), Expect = 1.270e-6
Identity = 29/61 (47.54%), Postives = 40/61 (65.57%), Query Frame = 0
Query:    7 AVADDDVEVLDTDEAGTDAFAAYFAEANKACDREVVFDAELGLAVESLPGGASTQSLWKLV 67
            A  D+DV +++TD    D+ +AYFA+  +  DRE VF AELGLAVE L  G + Q LW ++
Sbjct:  302 AKLDEDVAIIETDVG--DSLSAYFADGGRQQDREPVFSAELGLAVEGLQDGMTVQQLWSVL 360          
BLAST of mRNA_Ecto-sp13_S_contig1264.2185.1 vs. uniprot
Match: D8TIQ4_VOLCA (Bardet-Biedl syndrome 5 n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TIQ4_VOLCA)

HSP 1 Score: 50.8 bits (120), Expect = 1.130e-5
Identity = 26/59 (44.07%), Postives = 40/59 (67.80%), Query Frame = 0
Query:    9 ADDDVEVLDTDEAGTDAFAAYFAEANKACDREVVFDAELGLAVESLPGGASTQSLWKLV 67
            ++ DVE++D  + G DA A Y+A+A K  DR+ V+ AELGLA+E L  G + + LW ++
Sbjct:  287 SEQDVEIVDPPDRG-DALALYYADATKGVDRDPVYCAELGLAIEQLKEGLTIEQLWSVL 344          
BLAST of mRNA_Ecto-sp13_S_contig1264.2185.1 vs. uniprot
Match: A0A6U1I2A5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6U1I2A5_9STRA)

HSP 1 Score: 50.8 bits (120), Expect = 1.140e-5
Identity = 26/58 (44.83%), Postives = 39/58 (67.24%), Query Frame = 0
Query:   10 DDDVEVLDTDEAGTDAF-AAYFAEANKACDREVVFDAELGLAVESLPGGASTQSLWKL 66
            +DDVE+        DA  AAY+A+A +  ++ +V+D  LGLA+E LP G +T+SLW+L
Sbjct:  295 EDDVEIXXXXXXXHDAVVAAYYADAGRKSEKNIVYDPHLGLAIEELPPGVTTKSLWEL 352          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1264.2185.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A6H5JCP7_9PHAE2.020e-3498.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G173_ECTSI8.970e-3498.51Bardet-Biedl syndrome 5 n=1 Tax=Ectocarpus silicul... [more]
A0A835YZA3_9STRA1.180e-1453.73Bardet-Biedl syndrome 5 n=1 Tax=Tribonema minus Ta... [more]
A0A5J4XPR6_9CHLO1.870e-1047.76Bardet-Biedl syndrome 5 n=1 Tax=Trebouxia sp. A1-2... [more]
B3RQQ8_TRIAD3.420e-1052.24Uncharacterized protein n=2 Tax=Trichoplax TaxID=1... [more]
F0YFS0_AURAN8.330e-950.00Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A485LA64_9STRA5.420e-853.70Aste57867_17753 protein n=9 Tax=Aphanomyces TaxID=... [more]
A0A061RW20_9CHLO1.270e-647.54Bardet-Biedl syndrome 5 protein n=3 Tax=Tetraselmi... [more]
D8TIQ4_VOLCA1.130e-544.07Bardet-Biedl syndrome 5 n=1 Tax=Volvox carteri f. ... [more]
A0A6U1I2A5_9STRA1.140e-544.83Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006606Bardet-Biedl syndrome 5 proteinPFAMPF07289BBL5coord: 5..65
e-value: 6.4E-13
score: 48.4
IPR006606Bardet-Biedl syndrome 5 proteinPANTHERPTHR21351BARDET-BIEDL SYNDROME PROTEIN 5coord: 2..66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1264contigEcto-sp13_S_contig1264:1144..1623 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1264.2185.1mRNA_Ecto-sp13_S_contig1264.2185.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1264 698..1691 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1264.2185.1 ID=prot_Ecto-sp13_S_contig1264.2185.1|Name=mRNA_Ecto-sp13_S_contig1264.2185.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=68bp
MESRTVAVADDDVEVLDTDEAGTDAFAAYFAEANKACDREVVFDAELGLA
VESLPGGASTQSLWKLV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006606BBL5