prot_Ecto-sp13_S_contig12626.2174.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12626.2174.1
Unique Nameprot_Ecto-sp13_S_contig12626.2174.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length302
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12626.2174.1 vs. uniprot
Match: D7G3K7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3K7_ECTSI)

HSP 1 Score: 396 bits (1017), Expect = 2.390e-132
Identity = 252/298 (84.56%), Postives = 259/298 (86.91%), Query Frame = 0 
Query:    4 RSRAGTLSSLIHPRLSTVSQNSVKSENSMYDYQGLIHGRGSAVRMAMNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKIGGKSGRPQSIDLRRLSCAGNDAMGLESAHLETPQQRWVMPRRRYRHSHDASGGGNPDVSSSAVGAADGVGMRRSNGGGKRARSRAILKTPGFLKSPTLGGLRAGVGKAAKASKSTSFAVPVSNAGGAGAGARTPADSVDSSCASTVRAAEEASAVETPLFVPPALASSAVLCGLPAGLELSPSALVVASGLPSEE 301
            RSRAGTLSSLIHPRLSTVSQNSVKSENS+YDYQGLIHGRGSAVRMAMNN              XX      XXXXXXXXXXXXXXXXXXXXXXX      S+ GGKSGRPQSIDLR  S AGNDAMGLESAHLETPQQRWVMPRRR+RHSHDASGGGNPDV SSAV AADGVGMR S  GGKRARSRAILKTPGFLKSPTLGGLRAGVGKAA+A+KSTSFAVPVSNAGGAGAG RTPADSVDSSCASTVRAAEEASA +TPLFVPPALASSAVLCGLPA L LSP+ALVVASGLPSEE
Sbjct:  272 RSRAGTLSSLIHPRLSTVSQNSVKSENSVYDYQGLIHGRGSAVRMAMNNNSNASGVGGKPSRPXXVSLGGSXXXXXXXXXXXXXXXXXXXXXXX------SRAGGKSGRPQSIDLRIASSAGNDAMGLESAHLETPQQRWVMPRRRHRHSHDASGGGNPDVGSSAVVAADGVGMRGSKAGGKRARSRAILKTPGFLKSPTLGGLRAGVGKAARATKSTSFAVPVSNAGGAGAGTRTPADSVDSSCASTVRAAEEASAADTPLFVPPALASSAVLCGLPASLVLSPTALVVASGLPSEE 563
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12626.2174.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G3K7_ECTSI2.390e-13284.56Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12626contigEcto-sp13_S_contig12626:4081..4986 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12626.2174.1mRNA_Ecto-sp13_S_contig12626.2174.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12626 4081..4986 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12626.2174.1 ID=prot_Ecto-sp13_S_contig12626.2174.1|Name=mRNA_Ecto-sp13_S_contig12626.2174.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=302bp
PQPRSRAGTLSSLIHPRLSTVSQNSVKSENSMYDYQGLIHGRGSAVRMAM
NNNSNASGGGGKSSRPRPVSLGGSLGLPLSALGLGVGVGGGGGGGGGGGG
GGGSKIGGKSGRPQSIDLRRLSCAGNDAMGLESAHLETPQQRWVMPRRRY
RHSHDASGGGNPDVSSSAVGAADGVGMRRSNGGGKRARSRAILKTPGFLK
SPTLGGLRAGVGKAAKASKSTSFAVPVSNAGGAGAGARTPADSVDSSCAS
TVRAAEEASAVETPLFVPPALASSAVLCGLPAGLELSPSALVVASGLPSE
E*
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