prot_Ecto-sp13_S_contig12625.2173.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12625.2173.1
Unique Nameprot_Ecto-sp13_S_contig12625.2173.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length447
Homology
BLAST of mRNA_Ecto-sp13_S_contig12625.2173.1 vs. uniprot
Match: A0A6H5L0S6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0S6_9PHAE)

HSP 1 Score: 870 bits (2248), Expect = 3.850e-291
Identity = 425/437 (97.25%), Postives = 430/437 (98.40%), Query Frame = 0
Query:    1 HVLFDRRCSYPPSWLTSAFRLTATRVHMPQRTRKGKIAECSLVVWSRDVPAGSWVNLGGNRASEADTMYIVIITEGQEAAPARAVPAEDVAAAGTSTSGGVKRKINSKRELLESWTLGTEGLALCNVPKERLRVAVPEGAGRGIDGGVSGVYGDDGFGRLTRDAWSDELDVPGGANGVFQVKGTQGEVYELALRAEVCPGTFHRTTQVTVIPRFCMVNLLGDENIWLKEAGAPESSAIYIPPGGRLPWHWMLGRNQRAGVRVRTEGTAWSYGDVVINRVGTTAVHIPFVGQNQDRDGRASGRSGGGMMQLDAPGGEQTVVHVDVQLADDPFVDEYSLLVVFWKANGRFAPIYSARNASPVTVHLHQAVADREGRNAVTAKDVWKLQSGERRQIGWCYPAAPRCLLIYAGRGTRAVELNTDTVGNYVKVPTGLAMTGG 437
            HVLFDRRCSYPPSWLTSAFRLTATRVHMPQRTRKGKIAECSLVVWSRDVPAGSWV+LGGNRASEADTMY+VIITEGQEAAP RAVPAEDVAAAGTSTSGGVKRKINSK ELLESWTLGTEGLALCNVPKERLRVAVPEGAGRGIDGGV GVYGDDGFGRLT+DAWSDELDVPGGANGVFQVKGTQGEVYELALRAEVCPGTFHRTTQVTV+PRFCMVNLLGDENIWLKEAGAPESSAIYIPPGGRLPWHWMLGRNQRAGVRVRTEGTAWSYGDVVINRVGTTAVH+PFVGQNQDRDGRA GRSGGG MQLDAPGGEQTVVHVDVQLADDPFVDEYSLLVVFWKANGRFAPIYSA NASPVTVHLHQAVADREGRNAVTAKDVWKLQSGERRQIGWCYPAAPRCLLIYAGRGTRAVELNTDTVGNYVKVPTGLAM GG
Sbjct: 1812 HVLFDRRCSYPPSWLTSAFRLTATRVHMPQRTRKGKIAECSLVVWSRDVPAGSWVDLGGNRASEADTMYVVIITEGQEAAPPRAVPAEDVAAAGTSTSGGVKRKINSKGELLESWTLGTEGLALCNVPKERLRVAVPEGAGRGIDGGVCGVYGDDGFGRLTQDAWSDELDVPGGANGVFQVKGTQGEVYELALRAEVCPGTFHRTTQVTVVPRFCMVNLLGDENIWLKEAGAPESSAIYIPPGGRLPWHWMLGRNQRAGVRVRTEGTAWSYGDVVINRVGTTAVHVPFVGQNQDRDGRAGGRSGGGPMQLDAPGGEQTVVHVDVQLADDPFVDEYSLLVVFWKANGRFAPIYSAHNASPVTVHLHQAVADREGRNAVTAKDVWKLQSGERRQIGWCYPAAPRCLLIYAGRGTRAVELNTDTVGNYVKVPTGLAMAGG 2248          
BLAST of mRNA_Ecto-sp13_S_contig12625.2173.1 vs. uniprot
Match: D8LPW3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPW3_ECTSI)

HSP 1 Score: 852 bits (2200), Expect = 1.040e-279
Identity = 421/440 (95.68%), Postives = 424/440 (96.36%), Query Frame = 0
Query:    1 HVLFDRRCSYPPSWLTSAFRLTATRVHMPQRTRKGKIAECSLVVWSRDVPAGSWVNLGGNRASEADTMYIVIITEGQEAAPARAVPAEDVAAAGTSTSGGVKRKINSKRELLESWTLGTEGLALCNVPKERLRVAVPEGAGRGIDGGVSGVYGDDGFGRLTRDAWSDELDVPGGANGVFQVKGTQGEVYELALRAEVCPGTFHRTTQVTVIPRFCMVNLLGDENIWLKEAGAPESSAIYIPPGGRLPWHWMLGRNQRAGVRVRTEGTAWSYGDVVINRVGTTAVHIPFVGQNQDRDGRASGRSGGGMMQLDAPGGEQTVVHVDVQLADDPFVDEYSLLVVFWKANGRFAPIYSARNASPVTVHLHQAVADREGRNAVTAKDVWKLQSGERRQIGWCYPAAPRCLLIYAGRGTRAVELNTDTVGNYVKVPTGLAMTGGVAA 440
            HVLFDRRCSYPPSWLTS FRLTATRVHMPQRTRKGKIAECSLVVWSRDVPAGSWVNLGGNRASEADTMY+VIITEGQEAAPARAVPAE  AAAGTSTSGGVKR  NS+ ELLESWTLGTEGLALCN PKERLRVAVPEGAGRGIDGGVSGVYGDDGFGRLTRDAWSDELDVPGGANGVFQVKGTQGEVYELALRAEVCPGTF RTTQVTVIPRFCMVNLL DENIWLKEAGAPESSAI IPPGGRLPWHWMLGRNQRAGVRVRTEGTAWSYGDVVINRVGTTAVH+P VGQNQDRDGRA GRSGGG MQLDAP GEQTVVHVDVQLADDPFVDEYSLLVVFWKAN RFAPIYSARNASPVTVHLHQAVADREGRNAVTAKDVWKLQSGERRQIGW YPAAPRCLLIYAGRGTRAVELNTDTVGNYVKVPTGLAMTGGVAA
Sbjct: 2426 HVLFDRRCSYPPSWLTSRFRLTATRVHMPQRTRKGKIAECSLVVWSRDVPAGSWVNLGGNRASEADTMYVVIITEGQEAAPARAVPAEGFAAAGTSTSGGVKRTTNSQGELLESWTLGTEGLALCNAPKERLRVAVPEGAGRGIDGGVSGVYGDDGFGRLTRDAWSDELDVPGGANGVFQVKGTQGEVYELALRAEVCPGTFRRTTQVTVIPRFCMVNLLEDENIWLKEAGAPESSAICIPPGGRLPWHWMLGRNQRAGVRVRTEGTAWSYGDVVINRVGTTAVHVPLVGQNQDRDGRAGGRSGGGPMQLDAPAGEQTVVHVDVQLADDPFVDEYSLLVVFWKANERFAPIYSARNASPVTVHLHQAVADREGRNAVTAKDVWKLQSGERRQIGWAYPAAPRCLLIYAGRGTRAVELNTDTVGNYVKVPTGLAMTGGVAA 2865          
BLAST of mRNA_Ecto-sp13_S_contig12625.2173.1 vs. uniprot
Match: A0A6H5JHN3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JHN3_9PHAE)

HSP 1 Score: 651 bits (1679), Expect = 5.640e-209
Identity = 325/458 (70.96%), Postives = 371/458 (81.00%), Query Frame = 0
Query:    1 HVLFDRRCSYPPSWLTSAFRLTATRVHMPQRTRKGKIAECSLVVWSRDVPAGSWVNLGGNRASEADTMYIVIITEGQEAAPARAVPAEDVAAAGTSTSGGVKRKINSKRELLESWTLGTEGLALCNVPKERLRVAVPEGAGRGIDGGVSGVYGDDGFGRLTRDAWSDELDVPGGANGVFQVKGTQGEVYELALRAEVCPGTFHRTTQVTVIPRFCMVNLLGDENIWLKEAGAPESSAIYIPPGGRLPWHWMLGRNQRAGVRVRTEGTAWSYGDVVINRVGTTAVHIPFVGQNQDRDGRASGRSGG--------------------------GMMQLDAPGGEQTVVHVDVQLADDPFVDEYSLLVVFWKANGRFAPIYSARNASPVTVHLHQAVADREGRNAVTAKDVWKLQSGERRQIGWCYPAAPRCLLIYAGRGTRAVELNTDTVGNYVKVPTGL 432
            HVLFDRRC  PP WLTS FRLTA RV M QRTRKGK+A+C LVVWSR+VPAGSWVNLGGN+AS+AD MY+VI+TE + A     V  E VAA+G+S S G+ RKI+S+ +LLESWTLGTEGLALCN PKER+RVAVPEGAGRGID    G YGDDGFG   RDAWSDELDVP GANGVFQVKGTQGE++ELALRAEVCPGTF RTTQVTVIPR+C+VNLL D+NIWLKEAGAPE+SA+ IPPGGRLPWHWMLG+N+++GVRVRTEGTAWSYGDVV+NRVGTTA+HIPF G+++D DG+  G++GG                          G  +LD   GEQTVVHVDVQLAD  FVDEY++LVVFWKAN RFAPIYSARNASPV V LHQA A+RE R  ++ K +WKL SG+RRQ+GW YPA+PR LLI AGRGTRAVEL+TDTVGNY K+PTGL
Sbjct: 2064 HVLFDRRCPSPPRWLTSRFRLTAERVDMSQRTRKGKVADCPLVVWSRNVPAGSWVNLGGNKASKADAMYLVIVTEEEVA-----VSTEAVAASGSSASSGINRKISSREDLLESWTLGTEGLALCNSPKERVRVAVPEGAGRGIDS-EGGGYGDDGFGSFMRDAWSDELDVPAGANGVFQVKGTQGEIFELALRAEVCPGTFGRTTQVTVIPRYCVVNLLRDDNIWLKEAGAPEASAVCIPPGGRLPWHWMLGKNKQSGVRVRTEGTAWSYGDVVMNRVGTTALHIPFFGEDEDLDGQYRGQAGGPPMKMPETFGGSSSXXXXXXXXXXXXGPTRLDKLDGEQTVVHVDVQLADKTFVDEYAVLVVFWKANERFAPIYSARNASPVAVRLHQAGANREQRQILSEKAMWKLSSGQRRQVGWAYPASPRSLLISAGRGTRAVELSTDTVGNYAKIPTGL 2515          
BLAST of mRNA_Ecto-sp13_S_contig12625.2173.1 vs. uniprot
Match: A0A836C8S3_9STRA (Peroxin/Ferlin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8S3_9STRA)

HSP 1 Score: 204 bits (520), Expect = 7.370e-54
Identity = 159/476 (33.40%), Postives = 224/476 (47.06%), Query Frame = 0
Query:    1 HVLFDRRCSYPPSWLT-SAFRLTATRVHMPQRTRKGKIAECSLVVWSRDVPAGSWVNLGGNRASEADTMYIVIITEGQEAAPARAVPAEDVAAAGTSTSGGVKRKINSKRELLES-WTLGTEGLALCNVPKERLRVAVPEGAGRGIDGGVSGVYGDDGFGRLTRDAWSDELDVPGGANGVFQVKGTQGEVYELALRAEVCPGTFHRTTQV-----------------------------------TVIPRFCMVNLLGDENIWLKEAGAPESSAIYIPPGGRLPWHWMLGRNQRAGVRVRTEGTAWSYGDVVINRVGTTAVHIPFVGQNQDRDGRASGRSG--GGMMQLDAPGGEQTVVHVDVQLADDPFVDEYSLLVVFWKANGRFAPIYSARNASPVTVHLHQAVADREGRNAVTAKDVWKLQSGERRQIGWCYPAAPRCLLIYAGRGTRAV------ELNTDTVGNYVKVPTG 431
            ++LFD R S PP+W+  S FRL      +  R   G+       V+++DV  G  V LG NRA    +MY+V++      A  R     D          G + +I+S  + LES WT GT+GL +C+                G DG VS   G    G     +WSD +   GG  GVF VK   G +YELAL++E  PG F   T+V                                   T++PRFC+VNLL D  + +++AGA  +S + +  G   PWHW  GR ++  V +R  G+ WS   + I+RVG+TA+ +P  G     +G + GRSG  GG        G   VVHVDV+LA +P  DEY++LVV W A+ R  P++  RN     V +HQA A  +  + +  +    +  GE  +IGW YP  P  L +       AV      EL  + VGN+V+V  G
Sbjct: 2672 YLLFDDRASEPPAWVPRSGFRLARGEARLATRGAVGRQRLRIYSVYAKDVGMGEVVRLGANRAEGVASMYLVVVGP---RARRRVSMTYDA---------GARCEISSMSDELESAWTDGTQGLFICH----------------GGDGEVSLWGGLRMGGGGDSCSWSDLISTAGGQEGVFAVKAGNG-LYELALQSENMPGRFRHCTKVCSWQRLADPLAALCCVANAAVDAAGSMFTLHPNWVTIVPRFCVVNLLRDGPLLVRQAGAHTASPLCVQAGAHSPWHWPEGRGEKV-VELRAMGSDWSLDALDISRVGSTALLLP--GSAHAPEGASLGRSGRGGGGSGTHVNAGGARVVHVDVKLARNPRSDEYAVLVVVWAASRRNPPMFRVRNRCAAAVRVHQA-ARSDKLSQIRRRTSVTVMPGESSEIGWPYPTLPSTLGLSIAESIEAVARDRFAELPVEGVGNWVQVDGG 3114          
BLAST of mRNA_Ecto-sp13_S_contig12625.2173.1 vs. uniprot
Match: A0A0L0D9R2_THETB (Vacuolar protein sorting-associated protein 13C n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D9R2_THETB)

HSP 1 Score: 60.1 bits (144), Expect = 7.930e-6
Identity = 28/82 (34.15%), Postives = 45/82 (54.88%), Query Frame = 0
Query:  188 VYELALRAEVCPGTFHRTTQVTVIPRFCMVNLLGDENIWLKEAGAPESSAIYIPPGGRLPWHWMLGRNQRAGVRVRTEGTAW 269
            ++E  +      G F    QVTV PRF +VN + D  + +++ GAPE + + +  GGR P+HW+  + +R  V +  EG  W
Sbjct: 2734 LFEFGVSVTTGTGPFAVVKQVTVAPRFVIVNRVADFGVRVQQVGAPEGTGVPVAAGGRTPFHWVSSKLKRH-VSLVVEGAGW 2814          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12625.2173.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5L0S6_9PHAE3.850e-29197.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LPW3_ECTSI1.040e-27995.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JHN3_9PHAE5.640e-20970.96Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836C8S3_9STRA7.370e-5433.40Peroxin/Ferlin domain-containing protein n=1 Tax=T... [more]
A0A0L0D9R2_THETB7.930e-634.15Vacuolar protein sorting-associated protein 13C n=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009543Vacuolar protein sorting-associated protein 13, SHR-binding domainPFAMPF06650SHR-BDcoord: 164..286
e-value: 6.9E-8
score: 32.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12625contigEcto-sp13_S_contig12625:469..1809 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12625.2173.1mRNA_Ecto-sp13_S_contig12625.2173.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12625 469..1809 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12625.2173.1 ID=prot_Ecto-sp13_S_contig12625.2173.1|Name=mRNA_Ecto-sp13_S_contig12625.2173.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=447bp
HVLFDRRCSYPPSWLTSAFRLTATRVHMPQRTRKGKIAECSLVVWSRDVP
AGSWVNLGGNRASEADTMYIVIITEGQEAAPARAVPAEDVAAAGTSTSGG
VKRKINSKRELLESWTLGTEGLALCNVPKERLRVAVPEGAGRGIDGGVSG
VYGDDGFGRLTRDAWSDELDVPGGANGVFQVKGTQGEVYELALRAEVCPG
TFHRTTQVTVIPRFCMVNLLGDENIWLKEAGAPESSAIYIPPGGRLPWHW
MLGRNQRAGVRVRTEGTAWSYGDVVINRVGTTAVHIPFVGQNQDRDGRAS
GRSGGGMMQLDAPGGEQTVVHVDVQLADDPFVDEYSLLVVFWKANGRFAP
IYSARNASPVTVHLHQAVADREGRNAVTAKDVWKLQSGERRQIGWCYPAA
PRCLLIYAGRGTRAVELNTDTVGNYVKVPTGLAMTGGVAAGGGGGGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009543SHR-BD