mRNA_Ecto-sp13_S_contig12624.2172.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig12624.2172.1 vs. uniprot
Match: D8LH99_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH99_ECTSI) HSP 1 Score: 999 bits (2582), Expect = 0.000e+0 Identity = 503/558 (90.14%), Postives = 521/558 (93.37%), Query Frame = 1
Query: 19 MYHLRRHIRNPEMGVEKGWKLVKDELGEDLKSILDEALLSKCPEDGQNLLMYATAHGNEEWFLHLINYIRSQLGIPALVTELREIDIDGCPLLFHAASSNCEHSCFRTAKYIILSVLGKGELVQQFELVDGLGRGILMHAARSNHVINFKEIFNRCREVADRMRPHDEPMVGGQTEYFDPQLPATGTASADVGLLWEVLGKVDRIGKNCLHHAAEAGSYAVLHEVVRLCGSLYEEMNKADIMGRTPIMYVLRNDSCRGQEQQGPTLPLREESLRKKFYELYEALPDATCPQGTPVKKGWMEPSRVPPPHPTRQKEAGVDTRAVTELMHAARGGLVSLELALNQLPLASRNSTEGGFTVALDDALAVNITSGNTPGQSRRTKAWGWALLLAAAAKLGDIDVLYHVLLAIKKGKFILVKHGENDHDFRLAKVERPAGGGRVELPRGDRVQEAVGAIKTRGKSVFSYAILSGRTDAMELVYDLVRGLFGNNTEETWDILSGETNKSSSLTCAASASMEADNHGITMFDKVFSLLQQQTGDRLLVQRQLSPRFAMPHRGKGK 1692
MYHLRRHIRNPEMGVEKGWKLVKDELGE+L+SILDEALLSKCPEDGQNLLMYA AHGNEEWFLHLI++IRSQLGIPALVTELREIDIDGCPLLFHAASSNC++SCFRTAKYIILSVLGKGELVQQFELVDGLGRGILMHAARSNHV NFKE+FNRCREVADRMRPHDEP VGGQTE DPQLPAT TASAD+GLL EVLGK DRIGKNCLHHAAEAGSYAVLHEVV+LC S+YEEMN ADIMGRTPIMYVLRNDSCRGQEQQG TL L+EESLRKKF+ELYEAL DATCPQ TPVK GWMEPSRVPPP K VDTRAVTELMHAARGGLVSLELALN+LPLASRN EGGFTVALD+ALAVN+T GNT QS RTKAWGWALLLAAAAKLGDIDVLYHVLLAIKKGKF LVKHGENDHDFRLAKVERPAGGG VELPRGDRVQEAV AI TRGKSVFSYAILSGRTDAMELVYDLVRGLFG+ T +TWD LSG+TNKSSSLTCAASASMEADNHGITMFDKVFSLLQQQT DRLLVQRQLSPRFAMPHRGKGK
Sbjct: 1 MYHLRRHIRNPEMGVEKGWKLVKDELGENLESILDEALLSKCPEDGQNLLMYAAAHGNEEWFLHLIDHIRSQLGIPALVTELREIDIDGCPLLFHAASSNCKYSCFRTAKYIILSVLGKGELVQQFELVDGLGRGILMHAARSNHVDNFKEVFNRCREVADRMRPHDEPTVGGQTESLDPQLPATDTASADIGLLREVLGKADRIGKNCLHHAAEAGSYAVLHEVVKLCCSVYEEMNTADIMGRTPIMYVLRNDSCRGQEQQGSTLALKEESLRKKFHELYEALQDATCPQDTPVKTGWMEPSRVPPPSLAVPKGTRVDTRAVTELMHAARGGLVSLELALNKLPLASRNIAEGGFTVALDNALAVNMTIGNTQEQSHRTKAWGWALLLAAAAKLGDIDVLYHVLLAIKKGKFTLVKHGENDHDFRLAKVERPAGGGWVELPRGDRVQEAVRAINTRGKSVFSYAILSGRTDAMELVYDLVRGLFGDKTSQTWDTLSGKTNKSSSLTCAASASMEADNHGITMFDKVFSLLQQQTDDRLLVQRQLSPRFAMPHRGKGK 558
BLAST of mRNA_Ecto-sp13_S_contig12624.2172.1 vs. uniprot
Match: A0A6H5JTH2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTH2_9PHAE) HSP 1 Score: 787 bits (2033), Expect = 5.260e-282 Identity = 423/570 (74.21%), Postives = 449/570 (78.77%), Query Frame = 1
Query: 19 MYHLRRHIRNPEMGVEKGWKLVKDELGEDLKSILDEALLSKCPEDGQNL----------LMYATAHGNEEWFLHLINYIRS-QLGIPALVTELREIDIDGCPLLFHAASSNCEHSCFRTAKYIILSVLGKGELVQQFELVDGLGRGILMHAARSNHVINFKEIFNRCREVADRMRPHDEPMVGGQTEYFDPQLPATGTASADVGLLWEVLGKVDRIGKNCLHHAAEAGSYAVLHEVVRLCGSLYEEMNKADIMGRTPIMYVLRNDSCRGQEQQGPTLPLREESLRKKFYELYEALPDATCPQGTPVKKGWMEPSRVPPPHPTRQKEAGVDTRAVTELMHAARGGLVSLELALNQLPLASRNSTEGGFTVALDDALAVNITSGNTPG-QSRRTKAWGWALLLAAAAKLGDIDVLYHVLLAIKKGKFILVKHGENDHDFRLAKVERPAGGGRVELPRGDRVQEAVGAIKTRGKSVFSYAILSGRTDAMELVYDLVRGLFGNNTEETWDILSGETNKSSSLTCAASASMEADNHGITMFDKVFSLLQQQTGDRLLVQRQLSPRFAMPHRGKGK 1692
MYHLRRHIRNPEM VEKGWKLVKDELGEDL+SILDEALLSKC EDGQN ++ A ++ ++ + +S +LGIP L+TELREIDI GCPLLFHAASSNCE+SCFRTAK +ILSVLGKGELVQQFELVDGLGRGILMHAARSNHV NFKE+ N CREVAD M PHD+P VGGQTE DPQLPAT TASAD GLL +VLGKVDR+GKNCLHHAAEAGSYAVL EVV LCGSLYEEMN ADIMGRTPIMYVLRNDSCRGQ QQGPTL LRE+SLRKK YELYEALPDATC +GTPV+ GWM+PSRVP P PT K+ VDTRAVTEL+HAARGGLVSLELALN+LPLASRNSTE GFTVALDDALAVNIT Q RTKAWGWALLLAAAAKLG IDVLYHVLLAIKKGKF LVK END DFRLAKVERPA GGRVELPRGDRVQ AV AIKTR KSVFSYAILSGRTDAMELVYDLVRGLFGN TE QT DRL +QRQLSP +MPHRGKGK
Sbjct: 1 MYHLRRHIRNPEMDVEKGWKLVKDELGEDLESILDEALLSKCSEDGQNCSCTPLPTGTRMVSAPDRPHQITAIYCLPPAQSTKLGIPTLLTELREIDIHGCPLLFHAASSNCEYSCFRTAKDMILSVLGKGELVQQFELVDGLGRGILMHAARSNHVENFKEVLNGCREVADCMLPHDKPTVGGQTESLDPQLPATDTASADAGLLLQVLGKVDRMGKNCLHHAAEAGSYAVLDEVVELCGSLYEEMNTADIMGRTPIMYVLRNDSCRGQAQQGPTLTLREQSLRKKLYELYEALPDATCTRGTPVRTGWMKPSRVPAPIPTVPKKNRVDTRAVTELIHAARGGLVSLELALNELPLASRNSTESGFTVALDDALAVNITIDKAQEEQFHRTKAWGWALLLAAAAKLGGIDVLYHVLLAIKKGKFNLVKRSENDRDFRLAKVERPADGGRVELPRGDRVQAAVRAIKTRAKSVFSYAILSGRTDAMELVYDLVRGLFGNYTEV------------------------------------------QTDDRLRLQRQLSPSVSMPHRGKGK 528
BLAST of mRNA_Ecto-sp13_S_contig12624.2172.1 vs. uniprot
Match: D8LHA0_ECTSI (Transient Receptor Potential Channel. Partial sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHA0_ECTSI) HSP 1 Score: 469 bits (1207), Expect = 1.360e-144 Identity = 280/593 (47.22%), Postives = 367/593 (61.89%), Query Frame = 1
Query: 10 QETMYHLRRHIRNPEMGVEKGWKLVKDELGEDLKSILDEALLSKCPEDGQNLLMYATAHGNEEWFLHLINYIRSQLGIPALVTELREIDIDGCPLLFHAASSNCEHSCFRTAKYIILSVLGKGELVQQFELVDGLGRGILMHAARSNHVINFKEIFNRCREVADRMRPHDE---------------PMVGGQTEYFDPQLPATGTASADVGLLWEVLGKVDRIGKNCLHHAAEAGSYAVLHEVVRLCGSLYEEMNKADIMGRTPIMYVLRND-SCRGQEQQGPTLPLREESLRKKFYELYEALP-DATCPQGTPVKKGWMEPSRVPPPHPTRQKEAGVDTRAVTELMHAARGGLVSLELALNQLPLASRNSTEGGFTVALDDALAVNITSGNTPGQSR----RTKAWGWALLLAAAAKLGDIDVLYHVLLAIKKGKFILVKHGENDHDFRLAKVERPAGGGRVELPRGDRVQEAVGAIKTRGKSVFSYAILSGRTDAMELVYDLVRGLFGNNT-----------------------------------EETWDILSGETNKSSSLTCAASASMEADNHGITMFDKVFSLLQQQ 1620
Q+ MY LRR IR+PE VEKG + V+ E+GE L+S+LDEAL SK PEDGQN+L+YA A GN+ W L L++ IRS++GI ALV ELRE DIDG PLLFHAASS +H CFR A ++ +VLGKG +++QFE +DGLGRGILMHAARSNHV FK++F++CR+ A+ +R HD+ P+ G + E T S++ LL EVLG VDR G CLHHAAEAGS VL EVV+ CGS + ++ +D GRTPIM VLRN C G+E R+ L KF L++ +P + G GWM+PSR+ P K+ V+TRAVTEL+HAARGG+VSLELALN+ S+ +E GF V LD ALAV + + QS+ RT WG ALLLAAAA+LGD+DVLYHVL+AI+ +F L ++ FRL + P +P ++++E +G I +R S+FS AILS R +A+EL++DLV LFG + + W IL+G ++ +SSLTCAAS SMEAD +G TMF VF +L++Q
Sbjct: 5 QKAMYELRRCIRDPEKDVEKGLEEVQKEVGEGLESLLDEALQSKWPEDGQNVLLYAAAQGNQTWLLGLVDLIRSRVGIHALVKELRETDIDGVPLLFHAASSRRKHCCFRIAYDLVFTVLGKGGVIEQFEALDGLGRGILMHAARSNHVDTFKDVFDKCRKAAESVRLHDQSNAVANDGRIEIPEVPLYGFRGERPSDSTTQTPEKSSNSLLLREVLGTVDRKGMTCLHHAAEAGSSEVLCEVVKECGSHWADLGASDRSGRTPIMLVLRNAFCCEGEEH-----TCRQTDLEDKFGILFDEIPLEPIRATGGHRYIGWMQPSRIQPQRLPAPKQTPVETRAVTELIHAARGGVVSLELALNKALPNSKTDSEDGFKVHLDSALAVEVCIDGSWRQSQDDHHRTVIWGRALLLAAAARLGDVDVLYHVLVAIEDDEFFL--EADDAGKFRLPERPIPVDETPTAIPVSNKLREVLGMINSRNVSLFSLAILSRRHEAVELIFDLVVRLFGEDQSSRNDQRAVRFRDGDDGDQGHQGQGQRDRGNQPHHDTIWSILTGHSHTTSSLTCAASVSMEADGNGRTMFCLVFEMLEKQ 590
BLAST of mRNA_Ecto-sp13_S_contig12624.2172.1 vs. uniprot
Match: A0A6H5JNN7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNN7_9PHAE) HSP 1 Score: 339 bits (870), Expect = 1.640e-105 Identity = 250/561 (44.56%), Postives = 311/561 (55.44%), Query Frame = 1
Query: 10 QETMYHLRRHIRN---PEMGVEKGWKLVKDELGEDLKSILDEALLSKCPEDGQNLLMYATAHGNEEWFLHLINYIRSQLGIPALVTELREIDIDGCPLLFHAASSNCEHSCFRTAKYIILSVLGKGELVQQFELVDGLGRGILMHAARSNHVINFKEIFNRCREVADRMRPHDEPMVGGQTEYFDPQLPATGTASADVGLLWEVLGKVDRIGKNCLHHAAEAGSYAVLHEVVRLC----GSLYEEMNKADIMGRTPIMYVLRNDSCRGQEQQGPTLPLREESLRKKFYELYEALPDATCPQ---------GTPVKKGWMEPSRVPPPHP--TRQKEAGVDTRAVTELMHAARGGLVSLELALNQLPLASRNSTEGGFTVALDDALAVNITSGNTPGQSR--RTKAWGWALLLAAAAKLGDIDVLYHVLLAIKKGKFILVKHGENDHDFRLAKVERPAGGGRVELPRGDRVQEAVGAIKTRGKSVFSYAILSGRTDAMELVYDLVRGLFGNNTEETW------DILSGETNKSSSLTCAASASMEADNHGITMFDKVFSLLQ 1614
QETMY LRR IR E V+K + ++ LGEDL+S+LD AL SK PEDGQNL+ YA A G + WFL + IRS++G+ AL ELRE+DID PLLF+AA+S E SCFRTA ++ LGKG L++Q E VDG GR +LMHAARSN F EI VG + +P T + + K DR G NCLHHAAEAG VL +V++ GS Y E D RTP+MYVL +D+ R +SL KKF LY +P TC + G K+GWME + V ++ E R VTELMHAARGGL SLELALN+ PL S +G +++LD AL V + R AWG LLLAAAA+ GDIDVL+ VL AI+ G F + + F L + E G R LP G+ V+ V + GKS+FS AILSGRT A+E VY L+ LFG ETW D+LSG+ ++S L CAASASME +HG MFD V+S LQ
Sbjct: 19 QETMYRLRRQIREVIGTEKVVKKTFVEEQNLLGEDLESVLDGALQSKAPEDGQNLITYAAAQGRDVWFLFIAGKIRSKIGVRALAKELRELDIDRAPLLFNAAASRGETSCFRTAHDLVYKALGKGGLIEQLEAVDGEGRTMLMHAARSNDGNAFDEI------------------VG----IYSKAVPLTSS---------DYTAK-DRKGMNCLHHAAEAGCSEVLGKVIKKYSDAGGSSYAER---DNNNRTPVMYVL-SDATRDVRA--------GDSLLKKFTLLYSNMP-TTCGKQDEKVSVDPGEHAKEGWMEMTDVLTQRIQISKSHEITRKARGVTELMHAARGGLGSLELALNE-PLPSSRLADG--SISLDIALNVKACDEAASDKPRWEPQPAWGKGLLLAAAAERGDIDVLHIVLTAIQDGVFTKKPNADR---FTLRRHE----GRRAGLPFGENVKTVVREMSKGGKSLFSQAILSGRTVAVEHVYLLIVKLFGETDPETWAILTGIDLLSGKVAEASPLACAASASMEPSDHGSKMFDLVYSYLQ 524
BLAST of mRNA_Ecto-sp13_S_contig12624.2172.1 vs. uniprot
Match: D8LH97_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH97_ECTSI) HSP 1 Score: 327 bits (837), Expect = 9.620e-96 Identity = 242/545 (44.40%), Postives = 300/545 (55.05%), Query Frame = 1
Query: 94 LGEDLKSILDEALLSKCPEDGQNLLMYATAHGNEEWFLHLINYIRSQLGIPALVTELREIDIDGCPLLFHAASSNCEHSCFRTAKYIILSVLGKGELVQQFELVDGLGRGILMHAARSNHVINFKEIFNRCREVADRMRPHDEPMVGGQTEYFDPQLPATGTASADVGLLWEVLGKVDRIGKNCLHHAAEAGSYAVLHEVVRLC----GSLYEEMNKADIMGRTPIMYVLRNDSCRGQEQQGPTLPLREESLRKKFYELYEALPDATCPQ---------GTPVKKGWMEPSRVPPPHPTRQKEAGVDTRAVTELMHAARGGLVSLELALNQLPLASRNSTEGGFTVALDDALAVNITSGNTPGQSR--RTKAWGWALLLAAAAKLGDIDVLYHVLLAIKKGKFILVKHGENDHDFRLAKVERPAGGGRVELPRGD--RVQEAVGAIKTRGKSVFSYAILSGRTDAMELVYDLVRGLFGNNTEETWDIL------SGETNKSSSLTCAASASMEADNHGITMFDKVFSLLQQQTGDRLLVQRQLSP 1659
LGEDL+S+LD AL SK PEDGQNLL YA A G + WFL + IRS++G+ AL ELRE+DID PLLF+AA+S E SCFRTA ++ LGKG L++Q VDG GR +LMHAARSN+ + EI VG YF +P T + + D G NCLHHAAEAG VL +V++ GS Y E D RTP+M VL +D+ R + ++SLR KF LY + TC + G K+GWME + VP +R +E R VTELMHAARGGLVSLELALN+ PL S +G +++LD AL V + R AWG LLLAAAA+ GDIDVL+ VL AIK KF K D F L K E ELP GD +V+ V + GKS+FS AILSG+T A++ VY L+ LFG ETW IL SG+ ++S L CAASASME +HG FD V+S LQ D ++ QL P
Sbjct: 42 LGEDLESVLDGALQSKAPEDGQNLLTYAAAQGRDAWFLFIAGKIRSKMGVRALAKELRELDIDRAPLLFNAAASRGEKSCFRTAHDLVYKALGKGGLLEQLGAVDGEGRTMLMHAARSNNSDAYDEI------------------VG---IYFKV-VPLTSSGYTEK----------DHKGMNCLHHAAEAGCSEVLGKVIKKYSDAGGSSYAER---DNNNRTPVMCVL-SDASREERA--------DDSLRDKFTLLYSNM-STTCGEQDEKVCTHDGGHAKQGWMEMTDVPTQQISRSEEIS-KARGVTELMHAARGGLVSLELALNE-PLPSSRLEDG--SISLDGALNVEACDEPASDEPRWEPQPAWGKGLLLAAAAERGDIDVLHVVLTAIKDNKF--TKEPNTDR-FTLRKQESRL----AELPYGDGEKVRTVVREMSKGGKSLFSEAILSGQTVAVKHVYRLIVKLFGKTHPETWAILTGRDFNSGKVAEASPLACAASASMEPCDHGRDTFDLVYSYLQTHAPDEKKLRIQLVP 530
BLAST of mRNA_Ecto-sp13_S_contig12624.2172.1 vs. uniprot
Match: D7FNX3_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNX3_ECTSI) HSP 1 Score: 262 bits (670), Expect = 1.230e-75 Identity = 206/552 (37.32%), Postives = 288/552 (52.17%), Query Frame = 1
Query: 7 KQETMYHLRRHIRNPEMGVEKGWKLVKDELGEDLKSILDEALLSKCPEDGQNLLMYATAHGNEEWFLHLINYIRSQLGIPALVTELREIDIDGCPLLFHAASSNCEHSCFRTAKYIILSVLGKGELVQQFELVDGLGRGILMHAARSNHVINFKEIFNRCREVADRMRPHDEPMVGGQTEYFDPQLPATGTASADVGLLWEVLGKVDRIGKNCLHHAAEAGSYAVLHEV---VRLCGSLYEEMNKADIMGRTPIMYVLRNDSCRGQEQQGPTLPLREESLRKKFYELYEALPDATCPQGTPVKKGWMEPSRVPPPHPTRQKEAGVDTRAVTELMHAARGGLVSLELALNQLPLAS--RNSTEGGFTVALDDALAVNITSG----NTPGQSRRTKAWGWALLLAAAAKLGDIDVLYHVLLAIKKGKFILVKHGENDHDFRLAKVERPAGGGRVELPRGDRVQEAVGAIKTRGKSVFSYAILSGRTDAMELVYDLVRGLFGNNTEETWDILSGETNKSSSLTCAASASMEADNHGITMFDKVFSLLQQQTGDRL 1635
K + MY LR IR + V +G+ V+ LG+ +S++ +ALL+ P+DGQNL+ YA G EEWF++LI +IR QLG ALV +LR DI+G PLLF AASS +CF+T + +VLG+G LV+Q DG+GR ++M+AAR N V F ++N M H + E G + G L KVD +N LHHAAEAG VL EV VR + M+K D G TP+ +VLR + E +G + +R KF +L+ K +M P RV P + GV AVTEL+HAARGGL SL+L L ++ L R + V +++AL V + +TPGQ AWGW +LLAAAAK G +DVL V+ AIK G F+ D R A + A EL DR A+ AI + G S+F A+LSG+ +A+ VY L + W+ + G K S LTCA+S+SM++++HG + V++ L++ + L
Sbjct: 22 KHQAMYELRAAIRYRQ-SVAEGYARVEKNLGKISESLVHQALLASDPDDGQNLMAYAARWGREEWFIYLIQHIRDQLGFNALVKQLRARDINGAPLLFLAASSRSSENCFQTVHDALSAVLGRGGLVEQVAARDGMGRTVVMYAARGNDVEVFHRVWN--------MYHHHQRTFSAAGE---------GLGGSPSG----ALTKVDHTERNVLHHAAEAGCLDVLCEVLLLVRRISGDSKTMHKPDKNGLTPLHHVLR---AKYGEPEG------RDEIRPKFEKLWLHS----------NKGSFMVPRRVMPMPCVGR--TGVAVMAVTELIHAARGGLPSLKLVLAKIRLMKFWRKKPDSAV-VTVNEALRVTVDGKKGDEDTPGQGE-LDAWGWGMLLAAAAKGGHVDVLETVVHAIKTGSFV------EDVSERAAD-QGQATNTCQELEPVDR---AIEAILSSGSSLFGLAVLSGKVEAVLWVYQF---LAQRCPHQLWENVRGAQGKISPLTCASSSSMKSESHGTEILVAVYTCLRESSSTPL 515
BLAST of mRNA_Ecto-sp13_S_contig12624.2172.1 vs. uniprot
Match: A0A6H5JB40_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB40_9PHAE) HSP 1 Score: 244 bits (624), Expect = 2.590e-66 Identity = 188/560 (33.57%), Postives = 274/560 (48.93%), Query Frame = 1
Query: 7 KQETMYHLRRHIRNPEMGVEKGWKLVKDELGEDLKSILDEALLSKCPEDGQNLLMYATAHGNEEWFLHLINYIRSQLGIPALVTELREIDIDGCPLLFHAASSNCEHSCFRTAKYIILSVLGKGELVQQFELVDGLGRGILMHAARSNHVINFKEIFNRCREVADRMRPHDEPMVGGQTEYFDPQLPATGTASADVGLLWEVLGKVDRIGKNCLHHAAEAGSYAVLHEVVRLCGSLYEE----MNKADIMGRTPIMYVLRNDSCRGQEQQGPTLPLREESLRKKFYELYEALPDATCPQGTPVKKGWMEPSRVPPPHPTRQKEAGVDTRAVTELMHAARGGLVSLELALNQLPLASR-NSTEGGFTVALDDALAVNITSGNTPGQSR------------------RTKAWGWALLLAAAAKLGDIDVLYHVLLAIKKGKFILVKHGENDHDFRLAKVERPAGGGRVELPRGDRVQEAVGAIKTRGKSVFSYAILSGRTDAMELVYDLVRGLFGNNTEETWDILSGETNKSSSLTCAASASMEADNHGITMFDKVFSLLQQ 1617
KQ+ MY LR IR+ + V +G+ V G+ +S++ +ALL++ PEDGQNL+ YA G + WFL+L+ ++R +LG+ LV +LR DI+G PLLF A SS +CF+T +++ LGKG LV+Q D LGR I+M+AAR N V FK + M F + G A + L KVD G+N LHHAAEAG V+HE++ + +L + M+K D G TP+ ++LR + E + P +KF +L+ KG R P P R A V A+T+++HAARGGL SL+L L ++ L V +++AL V + G+ AWGW +LL AAAK G +DVL HV+ AIK G F+ N EL R DR AV AI + G +F A+LSG+ +A+ VY + + +E W + G +K ++LTCA+S+SM+ + G+ + V+S LQ+
Sbjct: 6 KQQAMYELRAAIRDRQ-SVAEGYARVDKIPGKISESLMHQALLARDPEDGQNLMAYAARWGRKRWFLYLVQHVRDKLGVGCLVKQLRAWDINGTPLLFLAISSRSSENCFKTVYDELVTALGKGGLVEQIAASDDLGRNIVMYAARGNSVDVFKRAWK---------------MYHYHQRTFASPVEGWGGAPSIT------LPKVDYTGRNLLHHAAEAGCLDVIHEILLMVRNLSDSTNVTMHKPDKNGLTPLHHLLR---AKYGEPEVPDDIEDPAEFPQKFEKLWFY-----------GSKGSFMARRKVMPLP-RDGRAAVAVSAITDVIHAARGGLPSLQLILAKICLTKCWQGKPNNTVVTIEEALCVAVHE-TMEGEDEXXXXXXXXXXXXXXXXXXELDAWGWGMLLTAAAKGGHVDVLEHVVHAIKTGSFVEGLSDRNADQRHTVYTNE-------ELQRVDR---AVEAIVSSGSYLFGQAVLSGKAEAVLWVYQFLAQRY---PKELWKNVRGAQDKINALTCASSSSMKCERQGVEVLVAVYSCLQE 514
BLAST of mRNA_Ecto-sp13_S_contig12624.2172.1 vs. uniprot
Match: D7FX79_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX79_ECTSI) HSP 1 Score: 239 bits (611), Expect = 1.080e-64 Identity = 188/556 (33.81%), Postives = 270/556 (48.56%), Query Frame = 1
Query: 19 MYHLRRHIRNPEMGVEKGWKLVKDELGEDLKSILDEALLSKCPEDGQNLLMYATAHGNEEWFLHLINYIRSQLGIPALVTELREIDIDGCPLLFHAASSNCEHSCFRTAKYIILSVLGKGELVQQFELVDGLGRGILMHAARSNHVINFKEIFNRCREVADRMRPHDEPMVGGQTEYFDPQLPATGTASADVGLLWEVLGKVDRIGKNCLHHAAEAGSYAVLHEVV----RLCGSLYEEMNKADIMGRTPIMYVLRNDSCRGQEQQGPTLPLREESLRKKFYELYEALPDATCPQGTPVKKGWMEPSRVPPPHPTRQKEAGVDTRAVTELMHAARGGLVSLELALNQLPLASR-NSTEGGFTVALDDALAVNITSGNTPGQSR------------------RTKAWGWALLLAAAAKLGDIDVLYHVLLAIKKGKFILVKHGENDHDFRLAKVERPAGGGRVELPRGDRVQEAVGAIKTRGKSVFSYAILSGRTDAMELVYDLVRGLFGNNTEETWDILSGETNKSSSLTCAASASMEADNHGITMFDKVFSLLQQ 1617
MY LR IR+ + V +G+ V G+ +S++ +ALL++ PEDGQNL+ YA G EEWFL+L+ ++R +LG+ LV +LR DI+G PLLF A SS +CF+ +++ LGKG LV+Q D LGR I+M+AAR N V FK + M F + G A + L KVD G+N LHHAAEAG VL+E++ +L S M+K D G TP+ ++LR + E + P +KF +L+ KG R P R A V A+T+++HAARGGL SL+L L ++ L V +++AL V + G+ AWGW +LLAAAAK G +DVL HV+ AIK G F+ N + EL R DR AV AI + G +F A+LSG+ + + VY + + +E W + G +K ++LTCA+SASM+ + G+ + V+S LQ+
Sbjct: 1 MYELRAAIRDRQ-SVAEGYARVDKIPGKISESLMHQALLARDPEDGQNLMAYAARWGREEWFLYLVQHVRDKLGVGCLVKQLRAWDINGTPLLFLAISSRSSENCFKAVFDELVTALGKGGLVEQIAASDDLGRNIVMYAARGNSVDVFKRAWK---------------MYHYHQRTFSSPVEGWGGAPSIT------LTKVDYTGRNLLHHAAEAGCLDVLNEILLMVRKLSDSANGTMHKPDKNGLTPLHHLLR---AKYGEPEVPGDIEDPAEFPQKFEKLWLY-----------GSKGSFMARRKVMALP-RDGRADVAVSAITDVIHAARGGLPSLQLILAKICLTKFWQGKPNNTVVTIEEALCVAVHE-TMEGEDEXXXXXXXXXXXXXXXXXXELDAWGWGMLLAAAAKGGHVDVLEHVVHAIKTGSFVEGLSDRNADQLHTVYTNQ-------ELQRVDR---AVEAIVSSGSYLFGQAVLSGKVEVVLWVYQFLAQRY---PQELWKNVRGAQDKINALTCASSASMKCERQGVEVLVAVYSCLQE 505 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12624.2172.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig12624.2172.1 >prot_Ecto-sp13_S_contig12624.2172.1 ID=prot_Ecto-sp13_S_contig12624.2172.1|Name=mRNA_Ecto-sp13_S_contig12624.2172.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=558bp MYHLRRHIRNPEMGVEKGWKLVKDELGEDLKSILDEALLSKCPEDGQNLLback to top mRNA from alignment at Ecto-sp13_S_contig12624:393..4049- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig12624.2172.1 ID=mRNA_Ecto-sp13_S_contig12624.2172.1|Name=mRNA_Ecto-sp13_S_contig12624.2172.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3657bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12624:393..4049- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12624:393..4049- >mRNA_Ecto-sp13_S_contig12624.2172.1 ID=mRNA_Ecto-sp13_S_contig12624.2172.1|Name=mRNA_Ecto-sp13_S_contig12624.2172.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1674bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12624:393..4049- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |