mRNA_Ecto-sp13_S_contig1262.2168.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig1262.2168.1
Unique NamemRNA_Ecto-sp13_S_contig1262.2168.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig1262.2168.1 vs. uniprot
Match: D7FKE9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKE9_ECTSI)

HSP 1 Score: 1146 bits (2965), Expect = 0.000e+0
Identity = 752/854 (88.06%), Postives = 772/854 (90.40%), Query Frame = 1
Query:  223 PQEATCDVECAMKVEEIRIMSKKRKQSQRVGG-NGALASKGGANNSAKAAKRPLSNSNGCGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKD-------SKDAASRRRFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVVDGLTSEHIKSHLQKYRLHRQRSREEFLKSYNYLTDLDGGKSLGGXXXXXXXXXXXXXXXXXXXXXEVQDFSPGRGRDAETPGCGSSCDCVTTSNLSGGSGIGAGSSSLVDVDGREEAARSTSTTGFAQTANGDEGAEGSGGGAKASVQLAGGGTEAVGGAQRLQPPAEAAAGEVVNGALLLSHLELLAKGIDMQVKFHNHLREVVESQQQLQAQLVRPQGREHLPKHLAEFSGXXXXXXXXXXXXXXXXXXXXXXTAASAVGVCPPSDLQYAGSVVGGEGNNRVPKEVHLVGGGCGSGVSTAGYSSTLSDSSSLVWSGGGEDKLAGSPKEAEQGGRRAAAAERPRRRERPCALNHAGASQLEASAAVDASMDAARAAASKAGQSVVDHMRGDGTGEHLGDAQQQQQFDPAAIREAFSVQAGAGRV-APSHSQGLSGRQGAGLAATRGYVPGDYTLTPKAPEDGGAGMVVPHARGQPAVLGAELLAGEGALGAHKSIFAARSPAEARAALAAATLAPVTSTGDASNGQETLTLQRHMQAQMSMQQSMLSACNDQATNFGQRGWYGXXXXXXXXXXXXXXXXFGEAGGGALRXXXXVGKEGGGNGYGAGVDLGNNKEQPRLDSLSLQPSDAGDPSAMMGLLHQDDMFDFGMLDREGELKSASGDSIPPGPAVTRPNGDEHSTLFSFLME 2757
            P+EATCDVECAMKVEEIRIMSKKRKQSQRVGG NGALAS+ GAN SAKAAKRPLSNSNGCGA        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         SK AASRRRFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVVDGLTSEHIKSHLQKYRLHRQRSREEFLKSYNYLTDLDGGKSLG XXXXXXXXXXXXXXXXXXXX +V+DFSPGRGRDAETP CGSSCDCV TS LSGGSGIG GS+SL + DGR EAARS STTGFAQ A+GDEGA+GSGGGAKAS QLAGGGTEAVGGAQRLQ P EAAAGEVVNGALLLSHLELLAKGIDMQVKFHNHLREVVESQQQLQAQLVR QGREH+P+H AEFSGXXXXXXXXXXXXXXXXXXXXXX AASAVG CPPSDLQYAGS+VG EGN RVPKEVHLVGGGCGSGVSTAGYSS LSDSSSLVWSGGGEDKLAGSPKEAEQGGR AAAAERPRRRERP  LNHAGASQLE +AA D SMD+ARAAASKA  SV DHMRGDGTGE LGD QQQQQFDPAA+REAFSVQA AGRV APSHSQGLSGRQGAGLA  RGY+ GDYTLTPKAPEDGG+G + PHARGQPAVLGAELLAGEGALGAHKSIFAARSPAEAR ALA+ATLAPVTSTG+ASNGQETLTLQRHMQAQMSMQQSMLSACNDQATNFGQRGW G XXXXXXXXXX     FGEAGGGALR     GKEGG NG GAG DLGN+KEQ RLDSLSLQPSDAGDPSAMMGLL QDDMFDFGMLDREGELKSA GDS PPGP V RPNGDEHSTLFSFLME
Sbjct:    2 PKEATCDVECAMKVEEIRIMSKKRKQSQRVGGGNGALASEEGANISAKAAKRPLSNSNGCGAGTQSAKSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKHAASRRRFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVVDGLTSEHIKSHLQKYRLHRQRSREEFLKSYNYLTDLDGGKSLGXXXXXXXXXXXXXXXXXXXXXDDVKDFSPGRGRDAETPECGSSCDCVDTSKLSGGSGIGGGSNSLAETDGRGEAARSKSTTGFAQAASGDEGAKGSGGGAKASAQLAGGGTEAVGGAQRLQLPGEAAAGEVVNGALLLSHLELLAKGIDMQVKFHNHLREVVESQQQLQAQLVRQQGREHVPQHPAEFSGXXXXXXXXXXXXXXXXXXXXXXXAASAVGFCPPSDLQYAGSIVGAEGNIRVPKEVHLVGGGCGSGVSTAGYSSNLSDSSSLVWSGGGEDKLAGSPKEAEQGGRGAAAAERPRRRERPGVLNHAGASQLEGAAAADVSMDSARAAASKARPSVADHMRGDGTGERLGDGQQQQQFDPAAMREAFSVQAVAGRVVAPSHSQGLSGRQGAGLAPPRGYMAGDYTLTPKAPEDGGSGRLAPHARGQPAVLGAELLAGEGALGAHKSIFAARSPAEARVALASATLAPVTSTGNASNGQETLTLQRHMQAQMSMQQSMLSACNDQATNFGQRGWCGGXXXXXXXXXXVATPAFGEAGGGALRGGSGAGKEGGXNGDGAGADLGNSKEQQRLDSLSLQPSDAGDPSAMMGLLPQDDMFDFGMLDREGELKSALGDSTPPGPPVARPNGDEHSTLFSFLME 855          
BLAST of mRNA_Ecto-sp13_S_contig1262.2168.1 vs. uniprot
Match: A0A6H5KUD1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUD1_9PHAE)

HSP 1 Score: 982 bits (2539), Expect = 0.000e+0
Identity = 671/860 (78.02%), Postives = 690/860 (80.23%), Query Frame = 1
Query:  223 PQEATCDVECAMKVEEIRIMSKKRKQSQRVGGNGALASKGGANNSAKAAKRPLSNSNGCGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDSKDAASRRRFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVVDGLTSEHIKSHLQKYRLHRQRSREEFLKSYNYLTDLDGGKSLGGXXXXXXXXXXXXXXXXXXXXXEVQDFSPGRGRDAETPGCGSSCDCVTTSNLSGGSGIGAGSSSLVDVDGREEAARSTSTTGFAQTANGDEGAEGSGGGAKASVQLAGGGTEAVGGAQRLQPPAEAAAGEVVNGALLLSHLELLAKGIDMQVKFHNHLREVVESQQQLQAQLVRPQGREHLPKHLAEFSGXXXXXXXXXXXXXXXXXXXXXX---TAASAVGVCPPSDLQYAGSVVGGEGNNRVPKEVHLVGGGCGSGVSTAGYSSTLSDSSSLVWSGGGEDKLAGSPKEAEQGGRRAAAAERPRRRERPCALNHAGASQLEASAAVDASMDAARAAASKAGQSVVDHMRGDGTGEHLGDAQQQQQFDPAAIREAFSVQAGAGRVAPSHSQGLSGRQGAGLAATRGYVPGDYTLTPKAPEDGGAGMVVPHARGQPAVLGAELLAGEGALGAHKSIFAARSPAEARAALAAATLAPVTSTGDASNGQETLTLQRHMQAQMSMQQSMLSACNDQATNFGQRGWYGXXXXXXXXXXXXXXXX------------FGEAGGGALRXXXXVGKEGGGNGYGAGVDLGNNKEQPRLDSLSLQPSDAGDPSAMMGLLHQDDMFDFGMLDREGELKSASGDSIPPGPAVTRPNGDEHSTLFSFLME 2757
            P+EATCDVECAMKVEEIRIMSKKRKQSQRVG                              XXXXXXXXXXXXX        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      A+RRRFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVVDGLTSEHIKSHLQK R                                       XXXXXXXXXX+++DFSPGRGRDAETPGCGSSCDCV TSNLSGGSG+           G  EAARS STTGFAQTAN DEGAEGSGGGAKAS QLAGGGTEAVGGAQRLQ P EAA GEVVNGALLLSHLELLAKGIDMQVKFHNHLREVVESQQQLQAQLVR QG EHLPKH AEFSGXXXXXXXXXXXX    XXXXXX   T ASAVGVCPPSDLQYAGS VG E NNR PKEVHLVGGGCGSGVSTAG SSTLSDSSSLVWS GGED+ AGSPKEAEQGG+ AA AERPRRRERPCALN+ GASQLEA+AA D SMDAARA ASKA QSV DH+RGDGTGEHLGDAQQQQQFDPAA+REAFSVQAGAGRV PSHSQGLSGRQGAGLAA + YVPGDYTLTPKAP++GGAG V P  RGQPAVLGAELL GEGALGAHK+IFAARSPAEARAALAAA LAPVTST +ASNGQETLTLQRHMQAQMSMQQSMLSACNDQATNF +RGW G   XXXXXXXXXX  X            FGEAGGGALR    VGKEG GNG+GAG DLGNNKEQ RLDSLSLQPSDAGDPSAMMGLLHQDDMFDFGMLDREGELKSA GDS PPG AV RPNGDEHSTLFSFLME
Sbjct:   13 PKEATCDVECAMKVEEIRIMSKKRKQSQRVGXXXXXX---------XXXXXXXXXXXXXXXXXXXXXXXXXXXXPSPADQLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARRRFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVVDGLTSEHIKSHLQKPRX------------------------------------AAXXXXXXXXXXDLKDFSPGRGRDAETPGCGSSCDCVDTSNLSGGSGVXXXXXXXXXXXGSGEAARSKSTTGFAQTANRDEGAEGSGGGAKASAQLAGGGTEAVGGAQRLQLPGEAA-GEVVNGALLLSHLELLAKGIDMQVKFHNHLREVVESQQQLQAQLVRQQGTEHLPKHPAEFSGXXXXXXXXXXXXRAFPXXXXXXXXXTTASAVGVCPPSDLQYAGSNVGAEANNRAPKEVHLVGGGCGSGVSTAGCSSTLSDSSSLVWSRGGEDRPAGSPKEAEQGGKDAAPAERPRRRERPCALNYEGASQLEAAAAADVSMDAARATASKARQSVADHIRGDGTGEHLGDAQQQQQFDPAAMREAFSVQAGAGRVGPSHSQGLSGRQGAGLAAPQRYVPGDYTLTPKAPKNGGAGRVAPQPRGQPAVLGAELLGGEGALGAHKAIFAARSPAEARAALAAAALAPVTSTDNASNGQETLTLQRHMQAQMSMQQSMLSACNDQATNFDRRGWCGGGGXXXXXXXXXXGGXXXXXXXXVATPAFGEAGGGALRGGSGVGKEGSGNGHGAGADLGNNKEQQRLDSLSLQPSDAGDPSAMMGLLHQDDMFDFGMLDREGELKSAPGDSTPPGSAVARPNGDEHSTLFSFLME 826          
BLAST of mRNA_Ecto-sp13_S_contig1262.2168.1 vs. uniprot
Match: A0A835YR85_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR85_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 6.830e-20
Identity = 44/66 (66.67%), Postives = 53/66 (80.30%), Query Frame = 1
Query:  592 RFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVVDGLTSEHIKSHLQKYRLHRQRSREEFLKSY 789
            RFVW   LH  FV A+FDVGLK ASP++LL+MMP   GLT+EH+KSHLQK+RLHR +SREEFL  +
Sbjct:    1 RFVWPDALHAAFVTAIFDVGLKLASPRVLLDMMPDPQGLTTEHVKSHLQKFRLHRDKSREEFLTKH 66          
BLAST of mRNA_Ecto-sp13_S_contig1262.2168.1 vs. uniprot
Match: A0A6S6I5N2_9STRA (Phosphorus starvation response 1 n=1 Tax=Nannochloropsis oceanica TaxID=145522 RepID=A0A6S6I5N2_9STRA)

HSP 1 Score: 104 bits (259), Expect = 1.520e-19
Identity = 48/74 (64.86%), Postives = 61/74 (82.43%), Query Frame = 1
Query:  568 SKDAASRRRFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVVDGLTSEHIKSHLQKYRLHRQRSREEFLKSY 789
            + ++ +R+RFVW   LH+DFVAA+FDVGLKCASPK +LEMM     LT +HIKSHLQKYRLHR+R+REEFL+ +
Sbjct:   70 NNNSKARKRFVWPDDLHRDFVAAIFDVGLKCASPKTILEMMNNTKDLTPDHIKSHLQKYRLHRERAREEFLQHF 143          
BLAST of mRNA_Ecto-sp13_S_contig1262.2168.1 vs. uniprot
Match: W7U4E9_9STRA (Two-component response regulator arr12 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U4E9_9STRA)

HSP 1 Score: 103 bits (257), Expect = 1.730e-19
Identity = 47/74 (63.51%), Postives = 61/74 (82.43%), Query Frame = 1
Query:  568 SKDAASRRRFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVVDGLTSEHIKSHLQKYRLHRQRSREEFLKSY 789
            S+ + +++RFVW   LH+DFVAA+FDVGLKCASPK ++EMM     LT +HIKSHLQKYRLHR+R+REEFL+ +
Sbjct:   49 SESSKAKKRFVWPDDLHRDFVAAIFDVGLKCASPKTIMEMMSNTKELTPDHIKSHLQKYRLHRERAREEFLQHF 122          
BLAST of mRNA_Ecto-sp13_S_contig1262.2168.1 vs. uniprot
Match: A0A7S3QDX4_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QDX4_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 6.560e-17
Identity = 46/77 (59.74%), Postives = 57/77 (74.03%), Query Frame = 1
Query:  562 KDSKDAASRRRFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVVDGLTSEHIKSHLQKYRLHRQRSREEFLKSYN 792
            +   D    RRF W   LH+DFV+AVFDVGLK +SP  LLE MP  + +TSE IKSHLQKYRLHRQ+S++EF+ SY+
Sbjct:  149 RGGSDGRWSRRFAWPDELHRDFVSAVFDVGLKHSSPSALLEQMPKHEDITSERIKSHLQKYRLHRQKSKKEFMSSYD 225          
BLAST of mRNA_Ecto-sp13_S_contig1262.2168.1 vs. uniprot
Match: A0A7S3LD31_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LD31_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 1.840e-16
Identity = 43/79 (54.43%), Postives = 59/79 (74.68%), Query Frame = 1
Query:  562 KDSKDAASR--RRFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVVDGLTSEHIKSHLQKYRLHRQRSREEFLKSYN 792
            + +KD   R  +RF W   LH+DFVAA+FDVGLK +SP  +LE MP  + +TSE +KSHLQKYR+HR +S++EF+ SY+
Sbjct:   73 RKAKDTDPRWSKRFTWPDDLHRDFVAAIFDVGLKHSSPSTILEHMPKHEQITSERVKSHLQKYRIHRIKSKKEFMSSYD 151          
BLAST of mRNA_Ecto-sp13_S_contig1262.2168.1 vs. uniprot
Match: A0A7S2YNK9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YNK9_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 2.150e-15
Identity = 42/76 (55.26%), Postives = 56/76 (73.68%), Query Frame = 1
Query:  562 KDSKDAASRRRFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVVDGLTSEHIKSHLQKYRLHRQRSREEFLKSY 789
            K + D    +RF W   LH+DFV+A+FDVGLK +SP  LLE MP  + +T+E IKSHLQKYRLHR +S++EF+ +Y
Sbjct:  184 KSNNDGRWSKRFTWPEELHRDFVSAIFDVGLKHSSPSTLLEQMPKHEQITTERIKSHLQKYRLHRVKSKQEFMHTY 259          
BLAST of mRNA_Ecto-sp13_S_contig1262.2168.1 vs. uniprot
Match: A0A4D9DAJ4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DAJ4_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 6.790e-15
Identity = 41/62 (66.13%), Postives = 54/62 (87.10%), Query Frame = 1
Query:  610 PLHQ-DFVAAVFDVGLKCASPKLLLEMMPVVDGLTSEHIKSHLQKYRLHRQRSREEFLKSYN 792
            P H+ DFV AVF +GL+C+SPK+L+++MP+ D LT+EHIKSHLQKYRLH QRS+EEF++ YN
Sbjct:  287 PQHETDFVGAVFKLGLQCSSPKVLMDLMPMTDTLTTEHIKSHLQKYRLHGQRSKEEFVEYYN 348          
BLAST of mRNA_Ecto-sp13_S_contig1262.2168.1 vs. uniprot
Match: W7TSM2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TSM2_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 1.400e-14
Identity = 41/62 (66.13%), Postives = 54/62 (87.10%), Query Frame = 1
Query:  610 PLHQ-DFVAAVFDVGLKCASPKLLLEMMPVVDGLTSEHIKSHLQKYRLHRQRSREEFLKSYN 792
            P H+ DFV AVF +GL+C+SPK+L+++MP+ D LT+EHIKSHLQKYRLH QRS+EEF++ YN
Sbjct:  316 PQHETDFVGAVFKLGLQCSSPKVLMDLMPMTDTLTTEHIKSHLQKYRLHGQRSKEEFVEYYN 377          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1262.2168.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKE9_ECTSI0.000e+088.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KUD1_9PHAE0.000e+078.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YR85_9STRA6.830e-2066.67Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A6S6I5N2_9STRA1.520e-1964.86Phosphorus starvation response 1 n=1 Tax=Nannochlo... [more]
W7U4E9_9STRA1.730e-1963.51Two-component response regulator arr12 n=2 Tax=Mon... [more]
A0A7S3QDX4_9STRA6.560e-1759.74Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S3LD31_9STRA1.840e-1654.43Hypothetical protein (Fragment) n=1 Tax=Amphora co... [more]
A0A7S2YNK9_9STRA2.150e-1555.26Hypothetical protein (Fragment) n=1 Tax=Amphiprora... [more]
A0A4D9DAJ4_9STRA6.790e-1566.13Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7TSM2_9STRA1.400e-1466.13Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1262contigEcto-sp13_S_contig1262:13432..16191 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score89.4
Seed ortholog evalue8.9e-15
Seed eggNOG ortholog35128.Thaps2390
Model size2760
Hectar predicted targeting categoryother localisation
GOsGO:0008150,GO:0048519,GO:0048831,GO:0050789,GO:0050793,GO:0051093,GO:0051239,GO:0051241,GO:0065007,GO:1900055,GO:1900056,GO:1905622,GO:2000024,GO:2000026
Exons1
EggNOG free text desc.transcription, DNA-templated
EggNOG OGs2C4RN@1,2S88Y@2759,2XCYG@2836
Ec32 ortholog descriptionG2-like domain Myb transcription factor
Ec32 orthologEc-12_002320.1
Cds size2505
COG Functional cat.K
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462673.7164748-UTR-Ecto-sp13_S_contig1262:13431..136861681462673.7164748-UTR-Ecto-sp13_S_contig1262:13431..13686Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig1262 13432..13686 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462673.7265778-CDS-Ecto-sp13_S_contig1262:13686..161911681462673.7265778-CDS-Ecto-sp13_S_contig1262:13686..16191Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig1262 13687..16191 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1262.2168.1prot_Ecto-sp13_S_contig1262.2168.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig1262 13687..16191 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig1262.2168.1

>prot_Ecto-sp13_S_contig1262.2168.1 ID=prot_Ecto-sp13_S_contig1262.2168.1|Name=mRNA_Ecto-sp13_S_contig1262.2168.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=835bp
MKVEEIRIMSKKRKQSQRVGGNGALASKGGANNSAKAAKRPLSNSNGCGA
GTHSAKSGGGDGGGSVPSPADQTSAASAGAAALNLSKVSSASAAGGGGGG
GGKDSKDAASRRRFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVVDG
LTSEHIKSHLQKYRLHRQRSREEFLKSYNYLTDLDGGKSLGGGSAAATVA
KAAAAAANGGGGGEVQDFSPGRGRDAETPGCGSSCDCVTTSNLSGGSGIG
AGSSSLVDVDGREEAARSTSTTGFAQTANGDEGAEGSGGGAKASVQLAGG
GTEAVGGAQRLQPPAEAAAGEVVNGALLLSHLELLAKGIDMQVKFHNHLR
EVVESQQQLQAQLVRPQGREHLPKHLAEFSGGGGGGGTMPRAFLSSAAGT
TTATAASAVGVCPPSDLQYAGSVVGGEGNNRVPKEVHLVGGGCGSGVSTA
GYSSTLSDSSSLVWSGGGEDKLAGSPKEAEQGGRRAAAAERPRRRERPCA
LNHAGASQLEASAAVDASMDAARAAASKAGQSVVDHMRGDGTGEHLGDAQ
QQQQFDPAAIREAFSVQAGAGRVAPSHSQGLSGRQGAGLAATRGYVPGDY
TLTPKAPEDGGAGMVVPHARGQPAVLGAELLAGEGALGAHKSIFAARSPA
EARAALAAATLAPVTSTGDASNGQETLTLQRHMQAQMSMQQSMLSACNDQ
ATNFGQRGWYGGGGPAAAAPAAAASPAFGEAGGGALRGGGGVGKEGGGNG
YGAGVDLGNNKEQPRLDSLSLQPSDAGDPSAMMGLLHQDDMFDFGMLDRE
GELKSASGDSIPPGPAVTRPNGDEHSTLFSFLME*
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mRNA from alignment at Ecto-sp13_S_contig1262:13432..16191+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig1262.2168.1 ID=mRNA_Ecto-sp13_S_contig1262.2168.1|Name=mRNA_Ecto-sp13_S_contig1262.2168.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2760bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1262:13432..16191+ (Ectocarpus species13 EcNAP12_S_4_19m)
AAGGTTGATGGATAAGCTGCTGCCGTACAGTCTGGCGCAAGGTCTGTGGG ACGCACGTCGCCCATGCTTTCCTAGAACAGTACGAGTACTTGTTTATACT CCATTGCTTGCGTGCAAAGCGGAGACAACCCGTTCGTTACCCTGCTTTCA TACGGCCGACATGCCGACTGACCAACGGCCCGCTTGCAAACGCCCGCTCG TAAACGCCCCGCTCCCACCCGACCACAGGAGGCGACCTGCGACGTCGAGT GCGCCATGAAGGTAGAGGAGATTCGCATCATGAGCAAGAAGCGCAAGCAG TCTCAGCGGGTTGGCGGCAACGGGGCCTTGGCCTCCAAAGGGGGCGCGAA TAACAGCGCAAAGGCGGCCAAGCGGCCCTTGTCGAACAGTAACGGCTGCG GGGCGGGTACGCATTCCGCGAAGAGCGGCGGCGGCGATGGCGGCGGCTCC GTACCTTCTCCTGCCGACCAAACTTCGGCGGCCTCCGCGGGAGCGGCGGC GCTGAACCTATCGAAGGTGTCTTCGGCTTCGGCGGCCGGCGGCGGCGGCG GCGGCGGTGGCAAGGACTCCAAAGACGCCGCTTCTCGCCGGCGGTTCGTC TGGTCCGTGCCGCTGCACCAGGACTTCGTGGCGGCAGTCTTCGACGTGGG GCTCAAGTGCGCATCGCCCAAGCTCCTCCTGGAGATGATGCCCGTGGTGG ACGGGCTCACCTCCGAGCACATCAAGAGCCACCTCCAGAAGTACCGCCTG CACAGGCAGCGCTCCCGGGAGGAGTTCCTAAAGAGCTACAACTACCTCAC GGACCTGGACGGCGGCAAAAGCCTTGGCGGGGGCTCGGCGGCTGCCACCG TTGCCAAGGCCGCGGCAGCGGCCGCGAACGGCGGCGGCGGCGGCGAAGTT CAAGATTTTTCGCCAGGGCGCGGGCGGGACGCGGAGACTCCGGGGTGTGG GTCGAGTTGCGACTGCGTTACCACGTCCAATCTCAGCGGGGGCAGCGGGA TCGGGGCCGGCAGCAGCAGCCTCGTCGACGTGGACGGGAGAGAGGAGGCG GCTCGCTCAACATCGACGACGGGGTTTGCGCAGACTGCGAACGGGGACGA AGGTGCCGAGGGGAGCGGCGGCGGCGCCAAGGCGAGCGTGCAGCTGGCCG GAGGCGGGACAGAGGCGGTCGGCGGGGCGCAGCGGCTGCAGCCGCCCGCG GAGGCGGCGGCGGGGGAGGTGGTCAACGGCGCGCTGCTCTTGTCGCACCT GGAGCTCCTCGCCAAAGGGATCGACATGCAGGTCAAGTTCCACAACCACT TGCGGGAGGTGGTCGAGAGCCAGCAGCAGCTGCAAGCCCAGCTCGTGAGA CCTCAGGGCAGGGAGCACCTCCCCAAGCACCTTGCCGAGTTTTCCGGCGG CGGCGGCGGCGGCGGCACGATGCCGAGGGCCTTCCTGTCGAGCGCCGCGG GGACAACCACCGCGACTGCGGCTTCAGCCGTCGGCGTTTGTCCGCCGTCG GACTTGCAGTACGCGGGCAGCGTTGTCGGCGGAGAGGGCAACAACCGAGT GCCGAAAGAAGTGCACCTGGTTGGCGGCGGCTGCGGCAGCGGGGTGTCCA CGGCTGGATACAGCAGCACTCTCTCGGATTCGAGCAGCCTGGTGTGGTCG GGTGGAGGGGAAGACAAGCTTGCCGGCTCGCCCAAGGAAGCGGAACAGGG GGGCAGACGTGCCGCCGCAGCGGAACGACCGAGACGAAGAGAACGGCCGT GCGCGCTTAACCACGCGGGGGCGTCGCAGCTGGAAGCGAGTGCGGCGGTC GATGCTTCGATGGACGCCGCCCGCGCCGCCGCTTCAAAGGCCGGCCAGAG CGTCGTTGACCACATGCGCGGGGACGGGACGGGTGAGCATCTCGGCGATG CGCAACAGCAACAGCAGTTCGACCCGGCAGCAATACGAGAAGCATTTTCT GTGCAGGCGGGCGCGGGCAGGGTGGCTCCTTCGCATTCTCAGGGTCTGTC GGGCCGCCAGGGAGCGGGCTTAGCAGCGACCCGGGGATACGTGCCCGGAG ACTACACGCTTACGCCCAAAGCCCCGGAGGACGGCGGTGCAGGTATGGTA GTCCCGCACGCTCGCGGGCAGCCGGCGGTGTTAGGGGCAGAGTTGCTGGC CGGGGAGGGGGCGTTAGGGGCCCACAAGTCGATCTTTGCGGCGCGTAGCC CGGCGGAAGCCCGCGCTGCCTTGGCCGCCGCCACCCTTGCCCCGGTGACC TCGACTGGCGACGCGAGCAACGGACAGGAGACGCTGACGCTGCAGCGACA CATGCAGGCGCAGATGTCGATGCAGCAGAGCATGCTCTCGGCGTGCAACG ACCAGGCGACGAACTTCGGCCAGCGCGGGTGGTACGGGGGGGGGGGGCCT GCGGCGGCGGCGCCGGCGGCGGCGGCTTCTCCTGCGTTCGGCGAGGCGGG CGGTGGCGCGCTCCGCGGTGGTGGTGGAGTGGGGAAGGAGGGCGGTGGGA ACGGTTACGGGGCGGGGGTAGACCTGGGGAACAATAAGGAGCAGCCGCGC CTCGATTCGCTGTCACTGCAACCCTCCGATGCGGGGGACCCCTCGGCGAT GATGGGCCTCCTCCACCAAGACGACATGTTTGACTTCGGCATGCTCGACC GCGAGGGTGAGTTGAAGTCGGCGTCTGGAGACAGCATTCCTCCCGGCCCC GCAGTGACTCGGCCTAACGGGGACGAGCACTCGACCCTATTTTCGTTCTT GATGGAGTAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1262:13432..16191+

>mRNA_Ecto-sp13_S_contig1262.2168.1 ID=mRNA_Ecto-sp13_S_contig1262.2168.1|Name=mRNA_Ecto-sp13_S_contig1262.2168.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2505bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1262:13432..16191+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAAGGTAGAGGAGATTCGCATCATGAGCAAGAAGCGCAAGCAGTCTCA
GCGGGTTGGCGGCAACGGGGCCTTGGCCTCCAAAGGGGGCGCGAATAACA
GCGCAAAGGCGGCCAAGCGGCCCTTGTCGAACAGTAACGGCTGCGGGGCG
GGTACGCATTCCGCGAAGAGCGGCGGCGGCGATGGCGGCGGCTCCGTACC
TTCTCCTGCCGACCAAACTTCGGCGGCCTCCGCGGGAGCGGCGGCGCTGA
ACCTATCGAAGGTGTCTTCGGCTTCGGCGGCCGGCGGCGGCGGCGGCGGC
GGTGGCAAGGACTCCAAAGACGCCGCTTCTCGCCGGCGGTTCGTCTGGTC
CGTGCCGCTGCACCAGGACTTCGTGGCGGCAGTCTTCGACGTGGGGCTCA
AGTGCGCATCGCCCAAGCTCCTCCTGGAGATGATGCCCGTGGTGGACGGG
CTCACCTCCGAGCACATCAAGAGCCACCTCCAGAAGTACCGCCTGCACAG
GCAGCGCTCCCGGGAGGAGTTCCTAAAGAGCTACAACTACCTCACGGACC
TGGACGGCGGCAAAAGCCTTGGCGGGGGCTCGGCGGCTGCCACCGTTGCC
AAGGCCGCGGCAGCGGCCGCGAACGGCGGCGGCGGCGGCGAAGTTCAAGA
TTTTTCGCCAGGGCGCGGGCGGGACGCGGAGACTCCGGGGTGTGGGTCGA
GTTGCGACTGCGTTACCACGTCCAATCTCAGCGGGGGCAGCGGGATCGGG
GCCGGCAGCAGCAGCCTCGTCGACGTGGACGGGAGAGAGGAGGCGGCTCG
CTCAACATCGACGACGGGGTTTGCGCAGACTGCGAACGGGGACGAAGGTG
CCGAGGGGAGCGGCGGCGGCGCCAAGGCGAGCGTGCAGCTGGCCGGAGGC
GGGACAGAGGCGGTCGGCGGGGCGCAGCGGCTGCAGCCGCCCGCGGAGGC
GGCGGCGGGGGAGGTGGTCAACGGCGCGCTGCTCTTGTCGCACCTGGAGC
TCCTCGCCAAAGGGATCGACATGCAGGTCAAGTTCCACAACCACTTGCGG
GAGGTGGTCGAGAGCCAGCAGCAGCTGCAAGCCCAGCTCGTGAGACCTCA
GGGCAGGGAGCACCTCCCCAAGCACCTTGCCGAGTTTTCCGGCGGCGGCG
GCGGCGGCGGCACGATGCCGAGGGCCTTCCTGTCGAGCGCCGCGGGGACA
ACCACCGCGACTGCGGCTTCAGCCGTCGGCGTTTGTCCGCCGTCGGACTT
GCAGTACGCGGGCAGCGTTGTCGGCGGAGAGGGCAACAACCGAGTGCCGA
AAGAAGTGCACCTGGTTGGCGGCGGCTGCGGCAGCGGGGTGTCCACGGCT
GGATACAGCAGCACTCTCTCGGATTCGAGCAGCCTGGTGTGGTCGGGTGG
AGGGGAAGACAAGCTTGCCGGCTCGCCCAAGGAAGCGGAACAGGGGGGCA
GACGTGCCGCCGCAGCGGAACGACCGAGACGAAGAGAACGGCCGTGCGCG
CTTAACCACGCGGGGGCGTCGCAGCTGGAAGCGAGTGCGGCGGTCGATGC
TTCGATGGACGCCGCCCGCGCCGCCGCTTCAAAGGCCGGCCAGAGCGTCG
TTGACCACATGCGCGGGGACGGGACGGGTGAGCATCTCGGCGATGCGCAA
CAGCAACAGCAGTTCGACCCGGCAGCAATACGAGAAGCATTTTCTGTGCA
GGCGGGCGCGGGCAGGGTGGCTCCTTCGCATTCTCAGGGTCTGTCGGGCC
GCCAGGGAGCGGGCTTAGCAGCGACCCGGGGATACGTGCCCGGAGACTAC
ACGCTTACGCCCAAAGCCCCGGAGGACGGCGGTGCAGGTATGGTAGTCCC
GCACGCTCGCGGGCAGCCGGCGGTGTTAGGGGCAGAGTTGCTGGCCGGGG
AGGGGGCGTTAGGGGCCCACAAGTCGATCTTTGCGGCGCGTAGCCCGGCG
GAAGCCCGCGCTGCCTTGGCCGCCGCCACCCTTGCCCCGGTGACCTCGAC
TGGCGACGCGAGCAACGGACAGGAGACGCTGACGCTGCAGCGACACATGC
AGGCGCAGATGTCGATGCAGCAGAGCATGCTCTCGGCGTGCAACGACCAG
GCGACGAACTTCGGCCAGCGCGGGTGGTACGGGGGGGGGGGGCCTGCGGC
GGCGGCGCCGGCGGCGGCGGCTTCTCCTGCGTTCGGCGAGGCGGGCGGTG
GCGCGCTCCGCGGTGGTGGTGGAGTGGGGAAGGAGGGCGGTGGGAACGGT
TACGGGGCGGGGGTAGACCTGGGGAACAATAAGGAGCAGCCGCGCCTCGA
TTCGCTGTCACTGCAACCCTCCGATGCGGGGGACCCCTCGGCGATGATGG
GCCTCCTCCACCAAGACGACATGTTTGACTTCGGCATGCTCGACCGCGAG
GGTGAGTTGAAGTCGGCGTCTGGAGACAGCATTCCTCCCGGCCCCGCAGT
GACTCGGCCTAACGGGGACGAGCACTCGACCCTATTTTCGTTCTTGATGG
AGTAG
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