mRNA_Ecto-sp13_S_contig12615.2162.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig12615.2162.1 vs. uniprot
Match: D7FJM9_ECTSI (Utp12 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJM9_ECTSI) HSP 1 Score: 603 bits (1554), Expect = 4.540e-211 Identity = 335/361 (92.80%), Postives = 344/361 (95.29%), Query Frame = 1
Query: 1 LAKQYTCIAWHRPSSKKSKRGSSGASK-SSSLGMIALGTDKGSVSVWDLKRGALAYSLGEGEGFPSITSVAFSADGSSLFTASSGKEVVEWNVETGTVARKLKGIKHGATKICLHPAGKILAIASSAIRLLDLTTGKTARKLSAGHAGSVRLLSFSADGRYLASSASSARFVNVFDVAASEVPPSEPVCTLGFAATPAFLSLHTASPTGGGGEASNDQVTVVAGFDTGGVSVMRTRRQSDGKGGAVSKLDIRGAAGGPSSSPSALHGRLSSERPSSAILLATGSAASPGFAEASFEDEAGSLLSSSSVAAAGGHADGDEGEEEGTGDKGGPAHVVGPGELGIRGVEKDSVVAGGGRGDKME 1080
LAKQYTCIAWHR SSKKSKRGSSGASK SSSLGMIALGTDKGSVSVWDLKRGALAYSLGEGEGFPS+TS FSADGSSLF+ASSGKEVVEWNVETGTVARKLKG KHGATKICLHPAGKILAIASSAIRLLDLTTGKTARKLSAGHAGSVRLLSFSADGRYLASSASSARF NVFDVAASEVPPSEPVCTLGFAATPAFLSLH AS +GGGG+ S DQVTVVAGFDTGGVSVMRTRRQ+DGKGGAVSKLDIRGAAGGPSSSP+ALHGRLSSERPSSAILLATGSAASPGF EASFEDEAGSLLSSSSVA AGGHADG+E +EEGTGDKGGPAHVVGPGELGIRGVEKDSV G RGD+ME
Sbjct: 52 LAKQYTCIAWHRRSSKKSKRGSSGASKPSSSLGMIALGTDKGSVSVWDLKRGALAYSLGEGEGFPSVTSGGFSADGSSLFSASSGKEVVEWNVETGTVARKLKGFKHGATKICLHPAGKILAIASSAIRLLDLTTGKTARKLSAGHAGSVRLLSFSADGRYLASSASSARFANVFDVAASEVPPSEPVCTLGFAATPAFLSLHAASSSGGGGDVSTDQVTVVAGFDTGGVSVMRTRRQTDGKGGAVSKLDIRGAAGGPSSSPAALHGRLSSERPSSAILLATGSAASPGFVEASFEDEAGSLLSSSSVATAGGHADGEE-DEEGTGDKGGPAHVVGPGELGIRGVEKDSVAGEGARGDEME 411
BLAST of mRNA_Ecto-sp13_S_contig12615.2162.1 vs. uniprot
Match: A0A6H5KNN6_9PHAE (Utp12 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNN6_9PHAE) HSP 1 Score: 173 bits (439), Expect = 7.540e-47 Identity = 109/140 (77.86%), Postives = 111/140 (79.29%), Query Frame = 1
Query: 694 MRTRRQSDGKGGAVSKLDIRGAAGGPSSSPSALHGRLSSERPSSAILLATGSAASPGFAEASFEDEAGSLLSSSSVAAAGGHADGDEGEEEGTGDKGGPAHVVGPGELGIRGVEKDSVVAGGGRGDKMEDAGGGEDGDGR 1113
MRTRRQ+DGKGGAVSKLDIRGAAGGPSS P+ALHGRLSSERPSSAILLATGSAASPGFAEASFEDEAGSLL GTGDKGG AHVVGPGELGIRGVEKDSV GG R DKMEDAGG ED D R
Sbjct: 1 MRTRRQTDGKGGAVSKLDIRGAAGGPSS-PAALHGRLSSERPSSAILLATGSAASPGFAEASFEDEAGSLLXXXXXXXXXXXXXXXXXXXXGTGDKGGGAHVVGPGELGIRGVEKDSVGGGGARDDKMEDAGGREDSDSR 139
BLAST of mRNA_Ecto-sp13_S_contig12615.2162.1 vs. uniprot
Match: A0A4D9D9A1_9STRA (Utp12 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D9A1_9STRA) HSP 1 Score: 152 bits (385), Expect = 1.830e-37 Identity = 99/236 (41.95%), Postives = 149/236 (63.14%), Query Frame = 1
Query: 1 LAKQYTCIAWHRPSSKKSKRGSSGA-SKSSSLGMIALGTDKGSVSVWDLKRGALAYSLGEGEGFPSITSVAFSADGSSLFTASSGKE-VVEWNVETGTVARKLKGIKHGATKICLHPAGK-ILAIASSAIRLLDLTTGKTARKLSAGHAGSVRLLSFSADGRYLASSASSARFVNVFDVAASEVPPSEPVCTLGFAATPAFLSLHTASPTGGGGEASNDQVTVVAGFDTGGVSVMR 699
A QYTC+AW + + K + A + S+++G++ALGTD+G VSVWDL RG LA LGEG+ T +AFSADGS L+T+++G E V+EW++ TG R+L G KHGA+ + + PAG ILA+A + I L+DL +G+ +K+S+GHA +V ++FS DG +LA+++ +R +N+F E V T P +L+L A P+G E +T++A DTG V ++R
Sbjct: 40 FAFQYTCLAWMQGLAWNDKNLTKVAHNPSNAMGLLALGTDRGCVSVWDLTRGVLARRLGEGQSLKRFTGMAFSADGSRLYTSNAGDEDVLEWSLGTGECRRRLIGDKHGASALVVGPAGSAILAVARTRIHLIDLVSGERRKKISSGHAAAVTHMAFSEDGHFLATASVGSRHINIFSCQGKN---KEAVITTALDGCPTWLALR-ADPSGR--EKGAVVLTLLACCDTGSVRLLR 269
BLAST of mRNA_Ecto-sp13_S_contig12615.2162.1 vs. uniprot
Match: A0A1V9YMP7_9STRA (Utp12 domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YMP7_9STRA) HSP 1 Score: 145 bits (366), Expect = 5.030e-35 Identity = 111/310 (35.81%), Postives = 174/310 (56.13%), Query Frame = 1
Query: 1 LAKQYTCIAWHRPS---SKKSKRGSSGASKSSSLGMIALGTDKGSVSVWDLKRGALAYSLGE-----GEGFPSITSVAFSADGSSLFTASSGKEVVEWNVETGTVARKLKGIKHGATKICLHPAGKILAIASSAIRLLDLTTGKTARKLSAGHAGSVRLLSFSADGRYLASSASSARFVNVFDVAASEVPPSEPVCTLGFAATPAFLSLHTASPTGGGGEASNDQVTVVAGFDTGGVSVMRTRRQSDGKGGAVSKLDIRGAAGGPSSSPSALHGRLSSERPSSAILLATGSAASPGFAEASFEDEAGSLL 906
L+ +YTC+AW + S +KK KR + G LG++ALGT G + VWDL++G +A L G G ++T VAF+++G+SL+++++ K V+EWNV TG++ RK+K GATKI L +LA+ +S+I+L D+++GK +++L+ GHA +V L FSA GRY+ SS SS RFVNVFD +A +P+ +TP +H +A N TVVA + G V V + + K A + ++ A + L+++ S +++A GS P F + +DE G+ L
Sbjct: 47 LSYKYTCLAWSKTSPWTTKKGKRSAGGE-----LGVLALGTTTGVIVVWDLEKGEVAQRLARENNDHGHG-SAVTDVAFTSNGASLYSSAAEKYVLEWNVSTGSMVRKIKVGSEGATKIALSANDDVLAVGASSIKLFDVSSGKKSKRLTFGHASAVTQLFFSACGRYVFSS-SSERFVNVFDASADS---EDPLFNFACDSTP----IHVHGRVAVAKKAKNSTATVVASTEAGAVFVWQHAMTATSKPVAAAAKVVQSAI---------IVAALTADAAPS-VVVARGSVVKPHFETVAVQDEDGAFL 332
BLAST of mRNA_Ecto-sp13_S_contig12615.2162.1 vs. uniprot
Match: A0A485LGV1_9STRA (Aste57867_21150 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LGV1_9STRA) HSP 1 Score: 133 bits (335), Expect = 8.560e-31 Identity = 80/184 (43.48%), Postives = 120/184 (65.22%), Query Frame = 1
Query: 10 QYTCIAWHRPSSKKSKRGSSGASKSSSLGMIALGTDKGSVSVWDLKRGALAYSLG----EGEGFPSITSVAFSADGSSLFTASSGKEVVEWNVETGTVARKLKGIKHGATKICLHPAGKILAIASSAIRLLDLTTGKTARKLSAGHAGSVRLLSFSADGRYLASSASSARFVNVFDVAASEVPP 549
+YT +AW + S S + + + S LGM+ALGT G++ VW+L++G +A L E ++T + F++ G++LF+AS+ K V+EWNV+ G+VARK K GA+K+ L + +LA+ SS I+L D+ +GK ++KL++GH+ S+ L FSA GRYL S A+ RFVNVFDVAA P
Sbjct: 51 KYTSLAWTKTSVWSSGKKGNKRAASGELGMLALGTTTGAIVVWNLEKGEVAQRLSRDNSENGHAAAVTDIVFASSGATLFSASTEKNVLEWNVKDGSVARKFKVGAEGASKLALSASDDVLAVGSSHIKLFDVASGKKSKKLTSGHSTSIATLFFSACGRYLFS-ATHERFVNVFDVAADADAP 233
BLAST of mRNA_Ecto-sp13_S_contig12615.2162.1 vs. uniprot
Match: A0A8K1C4L7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C4L7_PYTOL) HSP 1 Score: 130 bits (328), Expect = 8.740e-30 Identity = 88/207 (42.51%), Postives = 127/207 (61.35%), Query Frame = 1
Query: 10 QYTCIAW--HRPSSKK-SKRGSSGASKSSSLGMIALGTDKGSVSVWDLKRGALAYSLG-EGEGFP-SITSVAFSADGSSLFTASSGKEVVEWNVETGTVARKLKGIKHGATKICLHPAGKILAIASSAIRLLDLTTGKTARKLSAGHAGSVRLLSFSADGRYLASSASSARFVNVFDVAASEVPPSEPVCTLGFAATPAFLSLHTAS 615
+YTCI W H P +K SKR +K+SS G+IALGT G + +WDL++G + L + EG +I VAF++ G+ L++ SS K V+EWNV+ G+VARK + GA K+ + P +ILA+ +AIR DL++GK ARKL AG + +V L FS RYL S+ RFVN++D++ +E EPV ++ A L + T S
Sbjct: 43 KYTCITWTQHSPLTKAGSKR-----AKTSSQGLIALGTSTGVIVIWDLRKGEVVQRLSSDKEGHNGAINDVAFNSQGNLLYSCSSDKNVLEWNVKDGSVARKFRCGSEGAQKVAVSPEDEILAVGGTAIRTFDLSSGKKARKLVAGLSSAVNQLRFSQCKRYLFSATIGGRFVNMYDLSNAE--NDEPVVNFSMPSSSASLFVRTKS 242
BLAST of mRNA_Ecto-sp13_S_contig12615.2162.1 vs. uniprot
Match: A0A5D6XKP2_9STRA (Utp12 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XKP2_9STRA) HSP 1 Score: 130 bits (328), Expect = 1.440e-29 Identity = 107/305 (35.08%), Postives = 159/305 (52.13%), Query Frame = 1
Query: 1 LAKQYTCIAW--HRPSSKKSKRGSSGASKSSSLGMIALGTDKGSVSVWDLKRGALAYSLGEGEGFPS----ITSVAFSADGSSLFTASSGKEVVEWNVETGTVARKLKGIKHGATKICLHPAGKILAIASSAIRLLDLTTGKTARKLSAGHAGSVRLLSFSADGRYLASSASSARFVNVFDVAASEVPPSEPVCTLGFAATPAFLSLHTASPTGGGGEASNDQVTVVAGFDTGGVSVMRTRRQSDGKGGAVSKLDIRG--AAGGPSSSPSALHGRLSSERPSSAILLATGSAASPGFAEASFEDE 891
L+ +YTCI W P KKS + + + ++ LG++ALGT G+V VWDL++G + +L + + +T VAF++ GS L+++SS K V+EWNV+ G V RK + GA K+ + ++LA+ SAIR DL +GK ARKL AG + SV L FSA R+L SS RFVN++D+AA+E EP + P L + G + V + A +G + V + +S K D + A G S+S L + S+E + +L+ GS P F S DE
Sbjct: 384 LSYKYTCITWTLSSPLLKKSAKRAKASGSAAPLGLVALGTSAGAVVVWDLQKGEVVQTLASDKDKDAHGAAVTDVAFNSQGSLLYSSSSEKHVLEWNVKDGAVTRKFR--TDGAHKLAVSANDEVLAVGGSAIRTFDLASGKKARKLVAGLSSSVSQLLFSACARFLFSSTVGGRFVNMYDLAATE--SDEPAVNFSMPSAPVALVARADA-----GRKKSTDVLLAAVATSGSLFVWTQKYKSGAKSTKPVAPDSKSVVADSGASASAGVLAVQASAETKTE-LLVVRGSLLKPVFERVSIVDE 678
BLAST of mRNA_Ecto-sp13_S_contig12615.2162.1 vs. uniprot
Match: A0A7S2MLY1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MLY1_9STRA) HSP 1 Score: 127 bits (320), Expect = 4.540e-29 Identity = 71/171 (41.52%), Postives = 109/171 (63.74%), Query Frame = 1
Query: 97 MIALGTDKGSVSVWDLKRGALAYSLGEGE-GFPSITSVAFSADGSSLFTASSGKEVVEWNVETGTVARKLKGIKHGATKICLHPAGKILAIASSAIRLLDLTTGKTARKLSAGHAGSVRLLSFSADGRYLASSASS-ARFVNVFDVAASEVPPSEPVCTLGFAATPAFLSL 603
M+A+GTD G +SVWDL+RG + LGE + ++ + FS+DG SL++ SS K++ +W+VE+G + R+ KG KHG + +LA+ SS +RL+DL TGK RK S GHA +VR ++FS G+YLA++ RFVN+FD +E + ++ +A P+ L+L
Sbjct: 1 MVAVGTDSGHISVWDLERGVVVVKLGENQKNMAAVKDLDFSSDGKSLYSCSSEKDIFDWDVESGKIVRRFKGDKHGTAVVVASRDRAVLAVGSSTVRLVDLETGKRIRKFSTGHAATVRCMAFS--GKYLATACEGDVRFVNIFD---TEAAGEAAIQSISVSAPPSSLAL 166
BLAST of mRNA_Ecto-sp13_S_contig12615.2162.1 vs. uniprot
Match: A0A3R7AE66_9STRA (Utp12 domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R7AE66_9STRA) HSP 1 Score: 121 bits (303), Expect = 5.020e-27 Identity = 77/191 (40.31%), Postives = 119/191 (62.30%), Query Frame = 1
Query: 1 LAKQYTCIAWHRPS----SKKSKRGSSGASKSSSLGMIALGTDKGSVSVWDLKRGA----LAYSLGEGEGFPSITSVAFSADGSSLFTASSGKEVVEWNVETGTVARKLKGIKHGATKICLHPAGKILAIASSAIRLLDLTTGKTARKLSAGHAGSVRLLSFSADGRYLASSASSARFVNVFDVAASEVPP 549
L +YT +AW + S + SK+G+ S +S LG++ALGT G++ VW+L++G LA E ++T + F++ G++LF++SS K V+EWNV+ TV RK K G +K+ L + +LA+ +S I+L D+ +GK + KL++GHA +V ++FS RYL SS RFVNVFDV++ V P
Sbjct: 19 LKYKYTTLAWTKASPWATTSASKKGNK-RSATSDLGVLALGTTTGAIVVWNLEKGEVGARLARETSENGHAAAVTDLVFTSTGATLFSSSSEKNVLEWNVKDATVTRKFKVGSEGVSKLALSKSDDVLAVGNSNIKLFDVASGKKSSKLTSGHATAVAHMAFSDCSRYLFSSTGE-RFVNVFDVSSDSVDP 207
BLAST of mRNA_Ecto-sp13_S_contig12615.2162.1 vs. uniprot
Match: A0A225WVJ3_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A225WVJ3_9STRA) HSP 1 Score: 120 bits (301), Expect = 3.520e-26 Identity = 78/188 (41.49%), Postives = 119/188 (63.30%), Query Frame = 1
Query: 1 LAKQYTCIAWHRPSSKKSKRGSSGASKSSSLGMIALGTDKGSVSVWDLKRGALAYSLGEG--EGFPSITSVAFSADGSSLFTASSGKEVVEWNVETGTVARKLKGIKHGATKICLHPAGKILAIASSAIRLLDLTTGKTARKLSAGHAGSVRLLSFSA--DG----RYLASSASSARFVNVFDVAASE 540
L+ +YTC+AW + S KSK+ S SS LG++ALGT GSV VWDL G + ++L G ++ ++AF+ GS L+++SS K V+EWNV +G VARK + GA+ + + G+IL SA+R DL++GK +RKL +G + +V L F+A DG R+L ++ + ARFVN++D+ +E
Sbjct: 40 LSYRYTCLAWTQASKTKSKK----RSGSSDLGLLALGTSNGSVVVWDLTTGDVKHTLHAEVVHGSGAVQALAFNPQGSLLYSSSSDKYVLEWNVNSGQVARKFRCGSGGASALAVSADGEILVAGGSALRTFDLSSGKKSRKLVSGLSSAVTQLRFAAVEDGLESSRFLFAATAGARFVNMYDLQLTE 223 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12615.2162.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig12615.2162.1 >prot_Ecto-sp13_S_contig12615.2162.1 ID=prot_Ecto-sp13_S_contig12615.2162.1|Name=mRNA_Ecto-sp13_S_contig12615.2162.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=371bp LAKQYTCIAWHRPSSKKSKRGSSGASKSSSLGMIALGTDKGSVSVWDLKRback to top mRNA from alignment at Ecto-sp13_S_contig12615:625..4991- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig12615.2162.1 ID=mRNA_Ecto-sp13_S_contig12615.2162.1|Name=mRNA_Ecto-sp13_S_contig12615.2162.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4367bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12615:625..4991- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12615:625..4991- >mRNA_Ecto-sp13_S_contig12615.2162.1 ID=mRNA_Ecto-sp13_S_contig12615.2162.1|Name=mRNA_Ecto-sp13_S_contig12615.2162.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1113bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12615:625..4991- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |