prot_Ecto-sp13_S_contig9970.21618.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9970.21618.1
Unique Nameprot_Ecto-sp13_S_contig9970.21618.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length169
Homology
BLAST of mRNA_Ecto-sp13_S_contig9970.21618.1 vs. uniprot
Match: A0A6H5JK68_9PHAE (Cysteine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JK68_9PHAE)

HSP 1 Score: 303 bits (776), Expect = 8.210e-97
Identity = 156/169 (92.31%), Postives = 158/169 (93.49%), Query Frame = 0
Query:    1 QDPARTKEPELALMSSLSDAKKEVKKCLCDDFDTPGAVGALQELVKKVNKYIEAKERAGEPIVADCVRGAAEYVTKIFKVFGLASPGPALGFSQGGDARGGGDAGGEGGEASREAILGPVLDVLSEFRDKVRGCGRAGDTKGVLAACDHVREELLPGVGVRLEDKGDQA 169
            +DPARTKEPEL LMSSLSDAKKEVKKCLCDDFDTPGA+GALQELVKKVNKYIEAKERAGEPIVADCVRGAAEYVTKIFKVFGLASPGPALGFSQGGDA G         EASREAILGPVLDVLSEFRDKVRGCGRAGDTKGVLAACDHVREELLPGVGVRLEDKGDQA
Sbjct:  389 RDPARTKEPELTLMSSLSDAKKEVKKCLCDDFDTPGAMGALQELVKKVNKYIEAKERAGEPIVADCVRGAAEYVTKIFKVFGLASPGPALGFSQGGDAGGXXXXXXXXXEASREAILGPVLDVLSEFRDKVRGCGRAGDTKGVLAACDHVREELLPGVGVRLEDKGDQA 557          
BLAST of mRNA_Ecto-sp13_S_contig9970.21618.1 vs. uniprot
Match: A0A835Z463_9STRA (Cysteine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z463_9STRA)

HSP 1 Score: 150 bits (380), Expect = 2.200e-39
Identity = 88/168 (52.38%), Postives = 106/168 (63.10%), Query Frame = 0
Query:    2 DPARTKEPELALMSSLSDAKKEVKKCLCDDFDTPGAVGAL-QELVKKVNKYIEAKERAGEPIVADCVRGAAEYVTKIFKVFGLASPGPALGFSQGGDARGGGDAGGEGGEASREAILGPVLDVLSEFRDKVRGCGRAGDTKGVLAACDHVREELLPGVGVRLEDKGDQ 168
            D  R  E E+AL   L + K  V+  LCDDFDTP A+  L  +LV+ VNKYI+ K  AG       VR A EYVT+IFKVFGL + G  +GF          D   EGG  SRE  +GPVLD LS FR +VR C RAGD+ GV++ACD VR++ LP +GVRLEDKGDQ
Sbjct:  383 DELRLGEGEIALYRKLEECKSGVRAALCDDFDTPTAIKLLASDLVRTVNKYIQEKTDAGLKSHYIVVRTAGEYVTRIFKVFGLVTSGVDMGF----------DVEQEGG-ISREEAMGPVLDALSTFRTQVRTCARAGDSAGVISACDQVRDDALPPLGVRLEDKGDQ 539          
BLAST of mRNA_Ecto-sp13_S_contig9970.21618.1 vs. uniprot
Match: A0A7S1XX51_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XX51_9STRA)

HSP 1 Score: 122 bits (306), Expect = 4.470e-30
Identity = 72/160 (45.00%), Postives = 98/160 (61.25%), Query Frame = 0
Query:    7 KEPELALMSSLSDAKKEVKKCLCDDFDTPGAVGALQELVKKVNKYIEAKERAGEPIVADCVRGAAEYVTKIFKVFGLASPGPALGFSQGGDARGGGDAGGEGGEASREAILGPVLDVLSEFRDKVRGCGRAGDTKGVLAACDHVREELLPGVGVRLEDKG 166
            ++ E+A  S+L   K++V   LCDDFDTP  +  L  LV+  N Y +  E A  P V   ++ +A Y+TK+F+VFGL      +GF        G +AG  GG ASRE  LGP+LDVL+ FR+KVR   R+GD+  VL+ACD +R+  L  +GVRLED G
Sbjct:  137 RQKEIAFESALLAIKQQVHDALCDDFDTPTVLQILLRLVRITNVYSKVFEPA--PPVPLIIKESARYITKMFRVFGLVEGDADMGF--------GSEAGAAGGGASREETLGPLLDVLTAFREKVRAAARSGDSAEVLSACDALRDVDLVELGVRLEDAG 286          
BLAST of mRNA_Ecto-sp13_S_contig9970.21618.1 vs. uniprot
Match: A0A7S3L6K9_9STRA (Cysteine--tRNA ligase n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L6K9_9STRA)

HSP 1 Score: 122 bits (307), Expect = 2.320e-29
Identity = 73/157 (46.50%), Postives = 94/157 (59.87%), Query Frame = 0
Query:   11 LALMSSLSDAKKEVKKCLCDDFDTPGAVGALQELVKKVNKYIEAKERAGEPIVADCVRGAAEYVTKIFKVFGLASPGPALGFSQGGDARGGGDAGGEGGEASREAILGPVLDVLSEFRDKVRGCGRAGDTKGVLAACDHVREELLPGVGVRLEDKGD 167
            + L  +L+D + +V   L DDFDTP A+  L +LVK  N Y+E +      +V   VR  A Y+TK+FKVFGL  P  ++GF          + G  GGE  +E IL PVLDVL  FR  VR   RAGDT+ +L  CD  R+ELLP +GVRLEDKG+
Sbjct:  393 VTLQQTLTDVQAKVGAALRDDFDTPTAMTKLGDLVKATNVYLETETTQ---VVGLVVRSVASYITKMFKVFGLI-PNDSIGFGL--------EDGSSGGEG-KEEILSPVLDVLMAFRSSVREQARAGDTQAILKLCDKFRDELLPPLGVRLEDKGE 536          
BLAST of mRNA_Ecto-sp13_S_contig9970.21618.1 vs. uniprot
Match: D8M9S2_BLAHO (Cysteine--tRNA ligase n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8M9S2_BLAHO)

HSP 1 Score: 118 bits (296), Expect = 6.280e-28
Identity = 65/162 (40.12%), Postives = 96/162 (59.26%), Query Frame = 0
Query:    3 PARTKEPELALMSSLSDAKKEVKKCLCDDFDTPGAVGALQELVKKVNKYIEAKERAGEPIVADCVRGAAEYVTKIFKVFGLASPGPALGFSQGGDARGGGDAGGEGGEASREAILGPVLDVLSEFRDKVRGCGRAGDTKGVLAACDHVREELLPGVGVRLED 164
            P R  + E+ L + L  A+  V  CLCDDFDT GA+ AL+ LV+ V +Y+E  +    P+V  C    A +V+++F+VFGL  P P +GF+ G +A            A REA+L PV+++LS+FR  V+      D   +L  CD +R+++LP VG+RLED
Sbjct:  340 PQRWDDAEVQLNAQLDAARTSVHTCLCDDFDTAGAMEALEGLVRAVYRYLETAKHIVAPLVLSC----AGFVSQMFRVFGLIEPEPKIGFAAGEEA------------ADREAVLSPVVEILSKFRTVVKK--NRADPAALLKLCDEIRDDILPFVGIRLED 483          
BLAST of mRNA_Ecto-sp13_S_contig9970.21618.1 vs. uniprot
Match: A0A7S3XKM0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XKM0_HETAK)

HSP 1 Score: 114 bits (285), Expect = 8.960e-28
Identity = 73/161 (45.34%), Postives = 91/161 (56.52%), Query Frame = 0
Query:   10 ELALMSSLSDAKKEVKKCLCDDFDTPGAVGALQELVKKVNKYIEAKERAGEPIVADCVRGAAEYVTKIFKVFGLASPGPA-LGFSQGGDARGGGDAGGEGGEASREAILGPVLDVLSEFRDKVRGCGRAGD---TKGVLAACDHVREELLPGVGVRLEDKG 166
            E+AL  +LS+AK  V   LCDDFD P A+  LQ+LV+  N Y+E        +V    R AA+YVTKIF+ FGL   G A +GF   G A G            +E +L PVLD L  FRD+VR   +AG     + VL ACD VR+  LP +GVRLED G
Sbjct:  148 EVALGRALSEAKAGVHAALCDDFDCPSALKELQKLVRASNVYLEGNAAPATLLV----RAAAQYVTKIFRTFGLVPDGGADIGFPVEGAAEGXXX------XXXKEEVLSPVLDALVAFRDRVRAAAKAGGDGAARAVLDACDEVRDMALPPLGVRLEDGG 298          
BLAST of mRNA_Ecto-sp13_S_contig9970.21618.1 vs. uniprot
Match: A0A7S0C423_9STRA (Cysteine--tRNA ligase n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C423_9STRA)

HSP 1 Score: 116 bits (290), Expect = 4.150e-27
Identity = 70/159 (44.03%), Postives = 92/159 (57.86%), Query Frame = 0
Query:   10 ELALMSSLSDAKKEVKKCLCDDFDTPGAVGALQELVKKVNKYIEAKERAG-EPIVADCVRGAAEYVTKIFKVFGLA--SPGPALGFSQGGDARGGGDAGGEGGEASREAILGPVLDVLSEFRDKVRGCGRAGDTKGVLAACDHVREELLPGVGVRLEDK 165
            E AL ++ +   K+V K   DDFDTPG + AL +L+K +NKY+EA E +    ++A  VR A  +VTKI KV GL   + G  +GF   G             + +RE  L P+LDVL  FR  VR   RA D KGVL ACD  R++ LP +G+RLEDK
Sbjct:  329 EFALDAATTACMKKVDKAFRDDFDTPGVLTALSDLIKDMNKYLEAVEISDTHKVIALVVRRAGLFVTKILKVLGLIPDNSGVEMGFPFDGTD-----------DVNREEALAPILDVLMSFRSTVRDAARAKDMKGVLTACDEFRDDDLPPLGIRLEDK 476          
BLAST of mRNA_Ecto-sp13_S_contig9970.21618.1 vs. uniprot
Match: A0A196SMU0_BLAHN (Cysteine--tRNA ligase n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SMU0_BLAHN)

HSP 1 Score: 116 bits (290), Expect = 4.610e-27
Identity = 64/162 (39.51%), Postives = 93/162 (57.41%), Query Frame = 0
Query:    3 PARTKEPELALMSSLSDAKKEVKKCLCDDFDTPGAVGALQELVKKVNKYIEAKERAGEPIVADCVRGAAEYVTKIFKVFGLASPGPALGFSQGGDARGGGDAGGEGGEASREAILGPVLDVLSEFRDKVRGCGRAGDTKGVLAACDHVREELLPGVGVRLED 164
            P R  E E+A+ ++L   +++V KCLCDDFDT GA+ AL+ LV+   +Y+E        +VA  V   A YVT +FKVFGL  P  ++GF Q             GG    E +L PV+++LSEFR +V+      +   +L  CD +R+++LP  G+RLED
Sbjct:  374 PERWDEKEVAMNAALMKCREDVHKCLCDDFDTEGAMAALEALVRAYYQYVEGASH----VVAPLVTSVAAYVTSMFKVFGLIDPEVSIGFGQ------------TGGSVDEETVLTPVVNILSEFRTRVKLA--RNNPAELLRLCDELRDDILPFAGIRLED 517          
BLAST of mRNA_Ecto-sp13_S_contig9970.21618.1 vs. uniprot
Match: A0A812UK10_SYMMI (Cysteine--tRNA ligase n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UK10_SYMMI)

HSP 1 Score: 115 bits (289), Expect = 6.300e-27
Identity = 67/164 (40.85%), Postives = 99/164 (60.37%), Query Frame = 0
Query:    3 PARTKEPELALMSSLSDAKKEVKKCLCDDFDTPGAVGALQELVKKVNKYIEAKERAGEPIVADCVRGAAEYVTKIFKVFGLASPGPALGFSQGGDARGGGDAGGEGGEASREAILGPVLDVLSEFRDKVRGCGRAGDTKGVLAACDHVREELLPGVGVRLEDKG 166
            P    + ++ALM      K+ V+  LCDDFDTP AVG L++L+++VNKYIE+    G  +++   R    Y+T + + FGL      +GFS   ++ GG  AG      ++E +L P LD L++FR+ VR     GDT  VLAA D +R+++LP +GVR+EDKG
Sbjct:  372 PQHVGQRDVALMQFQEATKENVRAALCDDFDTPTAVGHLKDLIREVNKYIESGV-VGSAVLSSTAR----YITSVLRTFGLVQDDNDIGFSL--ESSGGESAG------NKEELLAPYLDALTKFRETVRIAAINGDTAAVLAAADCLRDDVLPPLGVRMEDKG 522          
BLAST of mRNA_Ecto-sp13_S_contig9970.21618.1 vs. uniprot
Match: A0A7S3H856_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H856_9STRA)

HSP 1 Score: 112 bits (279), Expect = 1.110e-25
Identity = 68/168 (40.48%), Postives = 89/168 (52.98%), Query Frame = 0
Query:   12 ALMSSLSDAKKEVKKCLCDDFDTPGAVGALQELVKKVNKYIEAKERAGEPIVADC------------VRGAAEYVTKIFKVFGLASPGPALGFS-QGGDARGGGDAGGEGGEASREAILGPVLDVLSEFRDKVRGCGRAGDTKGVLAACDHVREELLPGVGVRLEDKG 166
            AL   L +AK  V+ CL DDFDTP AV  L EL+++ NKY+E           D             +   A Y+T I   FGL   G  +GF      A G G A G     S+E +L P LDVL+ FR +VR    +GDTK VL+  D +R+++LP +GVR+EDKG
Sbjct:  269 ALQQKLEEAKTNVRACLLDDFDTPRAVSVLTELIRECNKYVETGTATPISAATDLGPLPENGLSSVVLSSVARYITSILSTFGLVPSGSDIGFPLMESGAAGEGAADG----FSKEVLLTPFLDVLTAFRQEVRLAAMSGDTKAVLSIADKLRDDILPTLGVRMEDKG 432          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9970.21618.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JK68_9PHAE8.210e-9792.31Cysteine--tRNA ligase n=2 Tax=Ectocarpus TaxID=287... [more]
A0A835Z463_9STRA2.200e-3952.38Cysteine--tRNA ligase n=1 Tax=Tribonema minus TaxI... [more]
A0A7S1XX51_9STRA4.470e-3045.00Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S3L6K9_9STRA2.320e-2946.50Cysteine--tRNA ligase n=1 Tax=Amphora coffeiformis... [more]
D8M9S2_BLAHO6.280e-2840.12Cysteine--tRNA ligase n=1 Tax=Blastocystis hominis... [more]
A0A7S3XKM0_HETAK8.960e-2845.34Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S0C423_9STRA4.150e-2744.03Cysteine--tRNA ligase n=1 Tax=Proboscia inermis Ta... [more]
A0A196SMU0_BLAHN4.610e-2739.51Cysteine--tRNA ligase n=1 Tax=Blastocystis sp. sub... [more]
A0A812UK10_SYMMI6.300e-2740.85Cysteine--tRNA ligase n=1 Tax=Symbiodinium microad... [more]
A0A7S3H856_9STRA1.110e-2540.48Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015273Cysteinyl-tRNA synthetase, class Ia, DALRSMARTSM00840dalr_2_4coord: 23..90
e-value: 0.0022
score: 27.2
IPR015273Cysteinyl-tRNA synthetase, class Ia, DALRPFAMPF09190DALR_2coord: 25..83
e-value: 2.6E-6
score: 27.8
NoneNo IPR availableGENE3D1.20.120.640coord: 3..118
e-value: 5.4E-9
score: 38.4
NoneNo IPR availablePANTHERPTHR10890:SF3CYSTEINE--TRNA LIGASE, CYTOPLASMICcoord: 4..167
IPR024909Cysteinyl-tRNA synthetase/mycothiol ligasePANTHERPTHR10890CYSTEINYL-TRNA SYNTHETASEcoord: 4..167
IPR009080Aminoacyl-tRNA synthetase, class Ia, anticodon-bindingSUPERFAMILY47323Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasescoord: 10..167

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9970contigEcto-sp13_S_contig9970:2722..5450 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9970.21618.1mRNA_Ecto-sp13_S_contig9970.21618.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9970 2721..5450 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9970.21618.1 ID=prot_Ecto-sp13_S_contig9970.21618.1|Name=mRNA_Ecto-sp13_S_contig9970.21618.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=169bp
QDPARTKEPELALMSSLSDAKKEVKKCLCDDFDTPGAVGALQELVKKVNK
YIEAKERAGEPIVADCVRGAAEYVTKIFKVFGLASPGPALGFSQGGDARG
GGDAGGEGGEASREAILGPVLDVLSEFRDKVRGCGRAGDTKGVLAACDHV
REELLPGVGVRLEDKGDQA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015273Cys-tRNA-synt_Ia_DALR
IPR024909Cys-tRNA/MSH_ligase
IPR009080tRNAsynth_Ia_anticodon-bd